; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G013090 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G013090
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionWD repeat-containing protein 55
Genome locationchr03:23893920..23901864
RNA-Seq ExpressionLsi03G013090
SyntenyLsi03G013090
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK18772.1 WD repeat-containing protein 55 [Cucumis melo var. makuwa]2.0e-9867.52Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEINL DIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQ+LFKVRAHVKSCRAVRFINDGR    GSSDHSILSTDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDHKLGLYYCIHGVSSRTAGVHIWFFLNIDRFVDVSQNPV
                               QRSCCSSFKAH+DYISDMTYSSDS KLLAT                                    DRFVD SQNPV
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDHKLGLYYCIHGVSSRTAGVHIWFFLNIDRFVDVSQNPV

Query:  NALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVK--------------LWDMDLLQSSGNALNGRATVDA
        NALLKLDEDRVI  SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+K              LWDMDLLQSSGNA     TV+A
Subjt:  NALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVK--------------LWDMDLLQSSGNALNGRATVDA

Query:  SASNNIFTFTD
        SAS N FTFT+
Subjt:  SASNNIFTFTD

XP_004141133.1 WD repeat-containing protein 55 [Cucumis sativus]1.0e-10268.22Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEINL DIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQ+LFKVRAH KSCRAVRFINDGR    GSSDHSILSTDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLY------YCIHGVSSRT
                               QRSCCSSFKAH+DYISDMTY SDS KLLAT  D  LSV                +  L +         I G  + T
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLY------YCIHGVSSRT

Query:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN
          ++ W F     DRFVD SQNPVNALLKLDEDRVI  SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSGN
Subjt:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN

Query:  ALNGRATVDASASNNIFTFTD
        A     TV+ASAS N FTFTD
Subjt:  ALNGRATVDASASNNIFTFTD

XP_008464963.1 PREDICTED: WD repeat-containing protein 55 [Cucumis melo]2.1e-10368.54Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEINL DIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQ+LFKVRAHVKSCRAVRFINDGR    GSSDHSILSTDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLY------YCIHGVSSRT
                               QRSCCSSFKAH+DYISDMTYSSDS KLLAT  D  LSV                +  L +         I G  + T
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLY------YCIHGVSSRT

Query:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN
          ++ W F     DRFVD SQNPVNALLKLDEDRVI  SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSGN
Subjt:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN

Query:  ALNGRATVDASASNNIFTFTD
        A     TV+ASAS N FTFT+
Subjt:  ALNGRATVDASASNNIFTFTD

XP_022151710.1 WD repeat-containing protein 55 [Momordica charantia]2.6e-9864.6Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        ME+NLG IPFDLDFHPS+QLVAAG+I GNL LYRY+ANALPQRL KVRAH +SCRAVRFINDGR    GS DHSIL+TDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR
                               QRSCC++F+AH+DYISDMT+SSDSMKLLAT  D  LSV +                       K G    I G  + 
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR

Query:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG
        T  ++ W  F    DRFVD+SQNPVNALLKLDEDRV+A SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSG
Subjt:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG

Query:  NALNGRATVDASASNNIFTFTD
        N+ NG+ TVDA  S+N+FTF D
Subjt:  NALNGRATVDASASNNIFTFTD

XP_038905147.1 WD repeat-containing protein 55 [Benincasa hispida]3.0e-11072.05Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEINL DIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHV+SCRAVRFINDGR    GSSDHSILSTDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR
                               QRSCCSSFKAHKDYISDMTYSSDSMKLLAT  D  LSV +                       K G    I G  + 
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR

Query:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG
        T  ++ W  F    DRFVD SQNPVNALLKLDEDRVIA SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG
Subjt:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG

Query:  NALNGRATVDASASNNIFTFTD
        NALNGRATVDA AS+NIFTFTD
Subjt:  NALNGRATVDASASNNIFTFTD

TrEMBL top hitse value%identityAlignment
A0A1S3CPA6 WD repeat-containing protein 551.0e-10368.54Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEINL DIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQ+LFKVRAHVKSCRAVRFINDGR    GSSDHSILSTDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLY------YCIHGVSSRT
                               QRSCCSSFKAH+DYISDMTYSSDS KLLAT  D  LSV                +  L +         I G  + T
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLY------YCIHGVSSRT

Query:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN
          ++ W F     DRFVD SQNPVNALLKLDEDRVI  SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSGN
Subjt:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN

Query:  ALNGRATVDASASNNIFTFTD
        A     TV+ASAS N FTFT+
Subjt:  ALNGRATVDASASNNIFTFTD

A0A5A7UUH0 WD repeat-containing protein 551.0e-10368.54Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEINL DIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQ+LFKVRAHVKSCRAVRFINDGR    GSSDHSILSTDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLY------YCIHGVSSRT
                               QRSCCSSFKAH+DYISDMTYSSDS KLLAT  D  LSV                +  L +         I G  + T
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLY------YCIHGVSSRT

Query:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN
          ++ W F     DRFVD SQNPVNALLKLDEDRVI  SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSGN
Subjt:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN

Query:  ALNGRATVDASASNNIFTFTD
        A     TV+ASAS N FTFT+
Subjt:  ALNGRATVDASASNNIFTFTD

A0A5D3D5H4 WD repeat-containing protein 559.6e-9967.52Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEINL DIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQ+LFKVRAHVKSCRAVRFINDGR    GSSDHSILSTDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDHKLGLYYCIHGVSSRTAGVHIWFFLNIDRFVDVSQNPV
                               QRSCCSSFKAH+DYISDMTYSSDS KLLAT                                    DRFVD SQNPV
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDHKLGLYYCIHGVSSRTAGVHIWFFLNIDRFVDVSQNPV

Query:  NALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVK--------------LWDMDLLQSSGNALNGRATVDA
        NALLKLDEDRVI  SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+K              LWDMDLLQSSGNA     TV+A
Subjt:  NALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVK--------------LWDMDLLQSSGNALNGRATVDA

Query:  SASNNIFTFTD
        SAS N FTFT+
Subjt:  SASNNIFTFTD

A0A6J1DBY5 WD repeat-containing protein 551.3e-9864.6Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        ME+NLG IPFDLDFHPS+QLVAAG+I GNL LYRY+ANALPQRL KVRAH +SCRAVRFINDGR    GS DHSIL+TDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR
                               QRSCC++F+AH+DYISDMT+SSDSMKLLAT  D  LSV +                       K G    I G  + 
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR

Query:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG
        T  ++ W  F    DRFVD+SQNPVNALLKLDEDRV+A SESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYM+KLWDMDLLQSSG
Subjt:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG

Query:  NALNGRATVDASASNNIFTFTD
        N+ NG+ TVDA  S+N+FTF D
Subjt:  NALNGRATVDASASNNIFTFTD

A0A6J1H752 WD repeat-containing protein 551.9e-9462.96Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        ME+NLG IPFDLDFHPS+QLVAAG+I GNL LYRY  NALPQRL KVRAH +SCRAVRFINDGR    GS DHSIL+TDVETGSVIARLEDAH+      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR
                               QRSCC+SF+AH+DYISDMTYSSDSMKLLAT  D  LSV +                       K G    I G  + 
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR

Query:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG
        T  ++ W  F    DRFVD+SQNPVNALLKLDEDRV+A SESGLISLVG+LPNR+IQPIAEHSDYPVERLAFSHD+K+LGSISHDYM+KLWDMDLLQSS 
Subjt:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSG

Query:  NALNGRATV--DASASNNIFTFTD
        N  NG A V   ASAS+N+F F D
Subjt:  NALNGRATV--DASASNNIFTFTD

SwissProt top hitse value%identityAlignment
A1L112 WD repeat-containing protein 551.5e-1928.12Show/hide
Query:  LDFHPSDQLVAAGVIGGNLHLYRYDA-NALPQRLFKVRAHVKSCRAVRFINDGRG----SSDHSILSTDVETGSVIARLEDAH-----------------
        L FHP+  L+AAG + G++ ++ Y       + L+    H+KSCRAV F  DG+     S D +I   DVE G +  R+  AH                 
Subjt:  LDFHPSDQLVAAGVIGGNLHLYRYDA-NALPQRLFKVRAHVKSCRAVRFINDGRG----SSDHSILSTDVETGSVIARLEDAH-----------------

Query:  ------------EQRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSRTAGVHIW--F
                     +       + H++YI+DM        LL    D  L V +                       K G      G S  T  +  W  F
Subjt:  ------------EQRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSRTAGVHIW--F

Query:  FLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQS
            DRF  +    ++ ++ + E+ +  GS  G+I  V ILPNRV+  + +H+  PVE LA SH   FL S  HD  +K WDM  L++
Subjt:  FLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQS

O80775 WD repeat-containing protein 551.5e-6446.98Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEI+LG   F +DFHPS  LVAAG+I G+LHLYRYD+++   R  KVRAH +SCRAVRFI+DG+     S+D SIL+TDVETG+ +A LE+AHE      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLYY------CIHGVSSRT
                               QRSC   F AH+DYIS MT++SDSMKL+ T  D  LSV                D  L +         I G  + T
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLYY------CIHGVSSRT

Query:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN
          ++ W F     DRFVD++ N V+ALLKLDEDR+I G ++G+ISLVGILPNR+IQPI  H DYP+E LA SHD+KFLGS +HD M+KLW+++ +    N
Subjt:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN

Query:  ALNGRATVDASASNN
          +G A+  A  S++
Subjt:  ALNGRATVDASASNN

Q54SA5 WD repeat-containing protein 55 homolog9.5e-2727.43Show/hide
Query:  EINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE-------
        +I+   IPF L+FHP++ L+      G L L++Y  +    +L  +R H   CR   F +DG+     SSD S+   D+ TGS++   E+AH+       
Subjt:  EINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE-------

Query:  ---------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV---------------DHKLGLYYCIHG-----VSSRTAGVH
                             Q++    F+ H D+ISD+T + D   + AT  D  +S+               D++L     +         S+   + 
Subjt:  ---------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV---------------DHKLGLYYCIHG-----VSSRTAGVH

Query:  IWFFLNIDRFVDVSQNP--VNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDM
        I+   N++     + +P  V+AL+K++ +   +GS  G+I  +G+ P +++  + EHS +P+ER+A S D ++LGSISHD+ +K W++
Subjt:  IWFFLNIDRFVDVSQNP--VNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDM

Q58DT8 WD repeat-containing protein 551.3e-2028.82Show/hide
Query:  LDFHPSDQLVAAGVIGGNLHLYRYDA-NALPQRLFKVRAHVKSCRAVRFINDGRG----SSDHSILSTDVETGSVIARLEDAH-----------------
        L FHP+  L+AAG + G++ ++ Y       + L+    H+KSCRAV F  DG+     S D +I   DVE G +  R+  AH                 
Subjt:  LDFHPSDQLVAAGVIGGNLHLYRYDA-NALPQRLFKVRAHVKSCRAVRFINDGRG----SSDHSILSTDVETGSVIARLEDAH-----------------

Query:  ------------EQRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSRTAGVHIW--F
                     +       + H++YI+DM    D   LL    D  L V +                       K G      G S  T  +  W  F
Subjt:  ------------EQRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSRTAGVHIW--F

Query:  FLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQS
            DRF  +    ++ ++ + E  + AGS  G+I  V ILPNRV+  + +H++ PVE LA SH   FL S  HD  +K WDM  L++
Subjt:  FLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQS

Q6DRF9 WD repeat-containing protein 551.5e-1927.36Show/hide
Query:  EINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYD-ANALPQRLFKVRAHVKSCRAVRFINDGRG----SSDHSILSTDVETGSVIARLEDAHE------
        +I L  I   + FHP   ++AAG I G+++L+ Y       + L+    H+KSCR V F +DG+     S D +I   DVE G +  R+  AH+      
Subjt:  EINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYD-ANALPQRLFKVRAHVKSCRAVRFINDGRG----SSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR
                               + +     K H+DYISD+T       LL +  D  L V +                       K G    + G    
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSVDH-----------------------KLGLYYCIHGVSSR

Query:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLL
        T  +  W  F    DRF  V    V+ ++ + +  + A S  G+I  + ILPNRV+  I +H    +E +A   D  FL S +HD ++K WD+  L
Subjt:  TAGVHIW--FFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLL

Arabidopsis top hitse value%identityAlignment
AT2G34260.1 transducin family protein / WD-40 repeat family protein1.1e-6546.98Show/hide
Query:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------
        MEI+LG   F +DFHPS  LVAAG+I G+LHLYRYD+++   R  KVRAH +SCRAVRFI+DG+     S+D SIL+TDVETG+ +A LE+AHE      
Subjt:  MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGR----GSSDHSILSTDVETGSVIARLEDAHE------

Query:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLYY------CIHGVSSRT
                               QRSC   F AH+DYIS MT++SDSMKL+ T  D  LSV                D  L +         I G  + T
Subjt:  -----------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV----------------DHKLGLYY------CIHGVSSRT

Query:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN
          ++ W F     DRFVD++ N V+ALLKLDEDR+I G ++G+ISLVGILPNR+IQPI  H DYP+E LA SHD+KFLGS +HD M+KLW+++ +    N
Subjt:  AGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKFLGSISHDYMVKLWDMDLLQSSGN

Query:  ALNGRATVDASASNN
          +G A+  A  S++
Subjt:  ALNGRATVDASASNN

AT2G34260.2 transducin family protein / WD-40 repeat family protein5.7e-4343.5Show/hide
Query:  SSDHSILSTDVETGSVIARLEDAHE-----------------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV--------
        S+D SIL+TDVETG+ +A LE+AHE                             QRSC   F AH+DYIS MT++SDSMKL+ T  D  LSV        
Subjt:  SSDHSILSTDVETGSVIARLEDAHE-----------------------------QRSCCSSFKAHKDYISDMTYSSDSMKLLATRMDVKLSV--------

Query:  --------DHKLGLYY------CIHGVSSRTAGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERL
                D  L +         I G  + T  ++ W F     DRFVD++ N V+ALLKLDEDR+I G ++G+ISLVGILPNR+IQPI  H DYP+E L
Subjt:  --------DHKLGLYY------CIHGVSSRTAGVHIWFFLN--IDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERL

Query:  AFSHDRKFLGSISHDYMVKLWDMDLLQSSGNALNGRATVDASASNN
        A SHD+KFLGS +HD M+KLW+++ +    N  +G A+  A  S++
Subjt:  AFSHDRKFLGSISHDYMVKLWDMDLLQSSGNALNGRATVDASASNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATAAACCTTGGAGACATTCCTTTCGACTTGGACTTCCATCCATCCGACCAATTGGTTGCAGCTGGTGTGATCGGGGGCAATCTCCACTTGTACCGTTATGATGC
AAATGCTTTACCCCAAAGGCTCTTTAAAGTTCGTGCGCATGTCAAATCTTGCAGAGCTGTTCGATTCATCAATGACGGACGTGGTTCTTCAGACCATTCCATTCTCTCTA
CGGATGTGGAGACTGGTTCTGTTATTGCTCGTCTTGAAGATGCACATGAACAACGATCTTGCTGCAGTTCTTTCAAAGCTCATAAAGATTATATTTCAGATATGACCTAT
TCATCTGATTCCATGAAGCTTTTGGCAACAAGAATGGACGTAAAGTTATCTGTGGATCACAAACTGGGACTCTATTACTGTATTCATGGGGTTTCTTCCAGGACTGCAGG
TGTACATATATGGTTTTTCTTGAATATTGATCGCTTTGTTGATGTCTCTCAAAATCCTGTGAATGCATTGCTAAAGCTTGACGAAGACAGAGTCATTGCTGGATCTGAGA
GTGGACTCATCAGTCTGGTAGGCATATTGCCCAATAGAGTAATTCAACCAATTGCGGAACACTCTGACTACCCTGTGGAGCGGCTTGCTTTCTCCCATGACAGAAAGTTT
CTCGGCAGTATTTCACATGATTACATGGTAAAGCTGTGGGATATGGATTTATTGCAAAGTTCTGGAAACGCTTTAAATGGTCGGGCCACAGTAGATGCAAGTGCCAGTAA
CAATATATTTACTTTCACGGACTAG
mRNA sequenceShow/hide mRNA sequence
TCACAAATTTTTGAGTTAAAATTGTTTTCTTTCCGTAAAACAAAAAGGAAAAAGAAGGACGAAAAACCCTACGTTCTACGTAGCACTATTTCTTCTTCCTCTCCCTCTCA
CGTGCTCCACCCGACTCCCCTCCCCTTTTAGCAGCTCAGTGTCGCCGCCGTCGCCGCCGCCCTACTAGTAGTTTGCCCTGATTTTCAACTCGCTTCTTACTGATTTTCTT
TGTCGAATTATACTCTATGTCGGCCTCTGATAGCCACAGCAGTGTCGCTTGCCTTTGAACTTTAGAGGTTCCAAACAGGGAGTAACTCTCTCTTAGTACAGATATCCCAT
TGCGTTGGTACAATCAGAGTGTTAGAAATACAGACATGGAAATAAACCTTGGAGACATTCCTTTCGACTTGGACTTCCATCCATCCGACCAATTGGTTGCAGCTGGTGTG
ATCGGGGGCAATCTCCACTTGTACCGTTATGATGCAAATGCTTTACCCCAAAGGCTCTTTAAAGTTCGTGCGCATGTCAAATCTTGCAGAGCTGTTCGATTCATCAATGA
CGGACGTGGTTCTTCAGACCATTCCATTCTCTCTACGGATGTGGAGACTGGTTCTGTTATTGCTCGTCTTGAAGATGCACATGAACAACGATCTTGCTGCAGTTCTTTCA
AAGCTCATAAAGATTATATTTCAGATATGACCTATTCATCTGATTCCATGAAGCTTTTGGCAACAAGAATGGACGTAAAGTTATCTGTGGATCACAAACTGGGACTCTAT
TACTGTATTCATGGGGTTTCTTCCAGGACTGCAGGTGTACATATATGGTTTTTCTTGAATATTGATCGCTTTGTTGATGTCTCTCAAAATCCTGTGAATGCATTGCTAAA
GCTTGACGAAGACAGAGTCATTGCTGGATCTGAGAGTGGACTCATCAGTCTGGTAGGCATATTGCCCAATAGAGTAATTCAACCAATTGCGGAACACTCTGACTACCCTG
TGGAGCGGCTTGCTTTCTCCCATGACAGAAAGTTTCTCGGCAGTATTTCACATGATTACATGGTAAAGCTGTGGGATATGGATTTATTGCAAAGTTCTGGAAACGCTTTA
AATGGTCGGGCCACAGTAGATGCAAGTGCCAGTAACAATATATTTACTTTCACGGACTAGAAGAAAGAAGATCTAAAGAAAGGGACCAATCAAATTGTCAATTTATACTA
TATATTAAGGTTGATTTTGGCTTTACCCTCTTCACATGTTAAACTCTTTAAGACTTTATTACAAAGTTCTGGTCCATTTTCATTCTCATTTTGGATAGTATCAATTTATG
TGATCTGAAGGGCATAATTTTTTTTTTGATATGGTGGCAACATATTCTCATTCTTGAGTTGGGTTGTGTAGTGTAGTTAACTGACTTTTTCTTATTGAGGTGGATCCATA
TGAATAATAGTGAGTAATTAAAGGCAAGAAACAGAAAAGTGTGTGTTTGTTTTTTTAAAACTGAAATATATTAAAAACAGAAAACCAATACAACCATGAAACTTGACTCT
TCTCGAGAACGAAGGAACAACAAAGGGAGGAAACTAAGACCTGAAAGATATTGAAGAACACTAATACAGGAAGATTATGGGTTTTTGATCTACTCTCTAAAAGTTTTATA
AAAAAAAAT
Protein sequenceShow/hide protein sequence
MEINLGDIPFDLDFHPSDQLVAAGVIGGNLHLYRYDANALPQRLFKVRAHVKSCRAVRFINDGRGSSDHSILSTDVETGSVIARLEDAHEQRSCCSSFKAHKDYISDMTY
SSDSMKLLATRMDVKLSVDHKLGLYYCIHGVSSRTAGVHIWFFLNIDRFVDVSQNPVNALLKLDEDRVIAGSESGLISLVGILPNRVIQPIAEHSDYPVERLAFSHDRKF
LGSISHDYMVKLWDMDLLQSSGNALNGRATVDASASNNIFTFTD