; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G013130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G013130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr03:23942234..23945329
RNA-Seq ExpressionLsi03G013130
SyntenyLsi03G013130
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057183.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.7e-15294.44Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYAHSIMISAFCR GLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDY TFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLISSLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYV+VKDN GLISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK
        IHGSGYKIDQDLFM+ATSRYIELPEKKDLFIQLL WMPGQGYVVDSSTRNLILKN+HLFGRQLIAEILSK +L+SKSTKSRENTF LK
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK

XP_004141206.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Cucumis sativus]1.8e-15395.49Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLI SLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAG+ISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK
        IHGSGYKIDQDLFM+ATSRYIELPEKKDLFIQLL+WMPGQGYVVDSSTRNLILKN+HLFGRQLIAEILSK +L+SKSTKSRE TFLLK
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK

XP_008464969.1 PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Cucumis melo]7.7e-15294.44Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYAHSIMISAFCR GLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDY TFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLISSLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYV+VKDN GLISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK
        IHGSGYKIDQDLFM+ATSRYIELPEKKDLFIQLL WMPGQGYVVDSSTRNLILKN+HLFGRQLIAEILSK +L+SKSTKSRENTF LK
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK

XP_008464970.1 PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X2 [Cucumis melo]7.7e-15294.44Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYAHSIMISAFCR GLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDY TFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLISSLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYV+VKDN GLISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK
        IHGSGYKIDQDLFM+ATSRYIELPEKKDLFIQLL WMPGQGYVVDSSTRNLILKN+HLFGRQLIAEILSK +L+SKSTKSRENTF LK
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK

XP_038903773.1 pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Benincasa hispida]1.3e-15197.5Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLI SLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKS
        IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLL+WMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQT VSKSTKS
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKS

TrEMBL top hitse value%identityAlignment
A0A0A0LCK2 PPR_long domain-containing protein8.9e-15495.49Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLI SLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAG+ISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK
        IHGSGYKIDQDLFM+ATSRYIELPEKKDLFIQLL+WMPGQGYVVDSSTRNLILKN+HLFGRQLIAEILSK +L+SKSTKSRE TFLLK
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK

A0A1S3CMQ2 pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X23.7e-15294.44Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYAHSIMISAFCR GLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDY TFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLISSLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYV+VKDN GLISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK
        IHGSGYKIDQDLFM+ATSRYIELPEKKDLFIQLL WMPGQGYVVDSSTRNLILKN+HLFGRQLIAEILSK +L+SKSTKSRENTF LK
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK

A0A1S3CN74 pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X13.7e-15294.44Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYAHSIMISAFCR GLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDY TFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLISSLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYV+VKDN GLISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK
        IHGSGYKIDQDLFM+ATSRYIELPEKKDLFIQLL WMPGQGYVVDSSTRNLILKN+HLFGRQLIAEILSK +L+SKSTKSRENTF LK
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK

A0A5A7UMP3 Pentatricopeptide repeat-containing protein3.7e-15294.44Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYAHSIMISAFCR GLLEEAKLLAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDY TFHILIKYFFKEKLYLLCYRTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLISSLG IRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYV+VKDN GLISKPAIRKFAFGFMKFGN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK
        IHGSGYKIDQDLFM+ATSRYIELPEKKDLFIQLL WMPGQGYVVDSSTRNLILKN+HLFGRQLIAEILSK +L+SKSTKSRENTF LK
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK

A0A6J1DRU4 pentatricopeptide repeat-containing protein At1g10910, chloroplastic3.4e-14592.28Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYAHSIMIS FCR GLLEEAK LAKDFEATYDRYDIV+LNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYF KEKLYLL +RTLEDMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
        RKG+QPEEELCSSLISSLGKIRAYSEAFSVYN+LKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNA LIS+PAIRKFAF FMK GN+NLINDVMKA
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTF
        IHGSGYKIDQDLFMMATSRYIELPEKKDLF+QLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQ LVSK+T+S  N+F
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTF

SwissProt top hitse value%identityAlignment
B8Y6I0 Pentatricopeptide repeat-containing protein 10, chloroplastic3.4e-0921.28Show/hide
Query:  DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHR
        DG+  S +I+A CR GL++EA    +D +A      +V  N +L  + +AG     +++L +M+     PD  T++ L   + +   +    R L+ M  
Subjt:  DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHR

Query:  KGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAI--RKFAFGFM-----KFGNINLI
        KG  P     ++++++ G +    EA ++++ +K +        +  +L +L  G+  K  + V+ +  G +S+      +  +  M     K G  + +
Subjt:  KGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAI--RKFAFGFM-----KFGNINLI

Query:  NDVMKAIHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSK
          V++ +   G ++ +D +    + Y     + + F ++   M   G+    +T N +L   ++  RQ   +  + Q++VSK
Subjt:  NDVMKAIHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSK

Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial1.7e-0821.6Show/hide
Query:  YAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKG
        + ++ +++  C+ G +EEA  L  +FEA     D V   T++ AYC++GEM+   ++L++M    + P   TF++L+  F    +     + L  M  KG
Subjt:  YAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKG

Query:  YQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAF---GFMKFGNINLINDVMKA
          P     +SL+           A ++Y  +           +E ++      R +K+A+ + ++  G     ++  ++    GF+K        +V   
Subjt:  YQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAF---GFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLF
        +   G   D+++F
Subjt:  IHGSGYKIDQDLF

Q0WVV0 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic8.1e-11271.74Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYA+SIMISA CR    +EAK L++D E TY++ D+VMLNTMLCAYCRAGEMESVM+M++KMD+ A+SPDYNTFHILIKYF KEKL+LL Y+T  DMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
         KG++ EEELCSSLI  LGKIRA +EAFSVYN+L+YSKRT+CK LHEKILHILI G LLKDAY+VVKDNA +IS+P ++KF   FM  GNINL+NDV+K 
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSK
        +HGSG+KIDQ  F +A SRYI  P+KK+L +QLLQWMPGQGYVVDSSTRNLILKNSH+FGR LIAEILSK  + S+
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSK

Q9FMF6 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial4.4e-0931.21Show/hide
Query:  LLTDGYAHS-----IMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCY
        +L DG+A S     I+I+  CR G++EEA    K+        DIV  N+++   CRAG +E  + M RK+    I PD  TF+ L+ +  K        
Subjt:  LLTDGYAHS-----IMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCY

Query:  RTLEDMHRKGYQPEEELCSSLISS------LGKIRAYSEAF
          L++    G+ P     S L+ S      L + R Y+ AF
Subjt:  RTLEDMHRKGYQPEEELCSSLISS------LGKIRAYSEAF

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial5.2e-1030.08Show/hide
Query:  DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHR
        D   +SI+I   C+ G L+ A  L  + E    + DI+  NT++  +C AG  +   ++LR M    ISP+  TF +LI  F KE       + L++M +
Subjt:  DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHR

Query:  KGYQPEEELCSSLISSLGKIRAYSEAFSVYNIL
        +G  P     +SLI    K     EA  + +++
Subjt:  KGYQPEEELCSSLISSLGKIRAYSEAFSVYNIL

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.2e-0921.6Show/hide
Query:  YAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKG
        + ++ +++  C+ G +EEA  L  +FEA     D V   T++ AYC++GEM+   ++L++M    + P   TF++L+  F    +     + L  M  KG
Subjt:  YAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKG

Query:  YQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAF---GFMKFGNINLINDVMKA
          P     +SL+           A ++Y  +           +E ++      R +K+A+ + ++  G     ++  ++    GF+K        +V   
Subjt:  YQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAF---GFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLF
        +   G   D+++F
Subjt:  IHGSGYKIDQDLF

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein1.2e-0921.6Show/hide
Query:  YAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKG
        + ++ +++  C+ G +EEA  L  +FEA     D V   T++ AYC++GEM+   ++L++M    + P   TF++L+  F    +     + L  M  KG
Subjt:  YAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKG

Query:  YQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAF---GFMKFGNINLINDVMKA
          P     +SL+           A ++Y  +           +E ++      R +K+A+ + ++  G     ++  ++    GF+K        +V   
Subjt:  YQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAF---GFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLF
        +   G   D+++F
Subjt:  IHGSGYKIDQDLF

AT1G10910.1 Pentatricopeptide repeat (PPR) superfamily protein5.8e-11371.74Show/hide
Query:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH
        +DGYA+SIMISA CR    +EAK L++D E TY++ D+VMLNTMLCAYCRAGEMESVM+M++KMD+ A+SPDYNTFHILIKYF KEKL+LL Y+T  DMH
Subjt:  TDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMH

Query:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA
         KG++ EEELCSSLI  LGKIRA +EAFSVYN+L+YSKRT+CK LHEKILHILI G LLKDAY+VVKDNA +IS+P ++KF   FM  GNINL+NDV+K 
Subjt:  RKGYQPEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKA

Query:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSK
        +HGSG+KIDQ  F +A SRYI  P+KK+L +QLLQWMPGQGYVVDSSTRNLILKNSH+FGR LIAEILSK  + S+
Subjt:  IHGSGYKIDQDLFMMATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSK

AT1G12775.1 Pentatricopeptide repeat (PPR) superfamily protein3.7e-1130.08Show/hide
Query:  DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHR
        D   +SI+I   C+ G L+ A  L  + E    + DI+  NT++  +C AG  +   ++LR M    ISP+  TF +LI  F KE       + L++M +
Subjt:  DGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHR

Query:  KGYQPEEELCSSLISSLGKIRAYSEAFSVYNIL
        +G  P     +SLI    K     EA  + +++
Subjt:  KGYQPEEELCSSLISSLGKIRAYSEAFSVYNIL

AT5G64320.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-1031.21Show/hide
Query:  LLTDGYAHS-----IMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCY
        +L DG+A S     I+I+  CR G++EEA    K+        DIV  N+++   CRAG +E  + M RK+    I PD  TF+ L+ +  K        
Subjt:  LLTDGYAHS-----IMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCY

Query:  RTLEDMHRKGYQPEEELCSSLISS------LGKIRAYSEAF
          L++    G+ P     S L+ S      L + R Y+ AF
Subjt:  RTLEDMHRKGYQPEEELCSSLISS------LGKIRAYSEAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTTTCTTCTCACAGATGGATATGCTCACAGCATCATGATATCAGCTTTTTGCCGAGGTGGGCTTCTAGAAGAGGCAAAACTGTTGGCTAAAGATTTTGAAGCCAC
ATATGACAGATATGACATTGTAATGTTGAATACGATGCTCTGTGCCTACTGCAGAGCAGGGGAAATGGAGAGTGTCATGCAAATGCTTAGGAAAATGGATGACTTAGCGA
TCAGTCCAGATTATAATACCTTTCATATCTTAATCAAATATTTCTTCAAGGAGAAACTATATCTACTTTGTTATAGGACCTTGGAGGACATGCATCGTAAAGGCTACCAA
CCAGAGGAGGAACTCTGTTCATCTTTAATATCGTCTCTTGGGAAGATACGGGCTTATTCAGAAGCATTTTCAGTTTACAATATATTGAAATATAGTAAAAGAACAATGTG
CAAGGCACTCCATGAGAAGATTTTGCACATTCTAATTGCAGGTCGACTTCTCAAAGATGCTTATGTCGTTGTCAAGGACAATGCAGGGTTAATTTCTAAACCTGCCATAA
GGAAGTTCGCTTTTGGATTTATGAAGTTTGGTAATATCAACTTGATAAATGACGTAATGAAGGCAATCCATGGTTCTGGTTATAAGATTGATCAGGATTTGTTTATGATG
GCTACATCACGCTACATAGAGCTACCTGAAAAGAAGGATTTATTTATTCAATTGCTACAATGGATGCCTGGGCAGGGTTATGTTGTTGACTCATCAACAAGAAACCTTAT
CTTAAAGAACTCACATTTATTTGGTCGCCAGCTTATTGCAGAGATTCTGTCAAAGCAGACACTAGTGTCAAAATCTACAAAATCTCGTGAGAACACTTTTCTTTTAAAAT
AA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTTTCTTCTCACAGATGGATATGCTCACAGCATCATGATATCAGCTTTTTGCCGAGGTGGGCTTCTAGAAGAGGCAAAACTGTTGGCTAAAGATTTTGAAGCCAC
ATATGACAGATATGACATTGTAATGTTGAATACGATGCTCTGTGCCTACTGCAGAGCAGGGGAAATGGAGAGTGTCATGCAAATGCTTAGGAAAATGGATGACTTAGCGA
TCAGTCCAGATTATAATACCTTTCATATCTTAATCAAATATTTCTTCAAGGAGAAACTATATCTACTTTGTTATAGGACCTTGGAGGACATGCATCGTAAAGGCTACCAA
CCAGAGGAGGAACTCTGTTCATCTTTAATATCGTCTCTTGGGAAGATACGGGCTTATTCAGAAGCATTTTCAGTTTACAATATATTGAAATATAGTAAAAGAACAATGTG
CAAGGCACTCCATGAGAAGATTTTGCACATTCTAATTGCAGGTCGACTTCTCAAAGATGCTTATGTCGTTGTCAAGGACAATGCAGGGTTAATTTCTAAACCTGCCATAA
GGAAGTTCGCTTTTGGATTTATGAAGTTTGGTAATATCAACTTGATAAATGACGTAATGAAGGCAATCCATGGTTCTGGTTATAAGATTGATCAGGATTTGTTTATGATG
GCTACATCACGCTACATAGAGCTACCTGAAAAGAAGGATTTATTTATTCAATTGCTACAATGGATGCCTGGGCAGGGTTATGTTGTTGACTCATCAACAAGAAACCTTAT
CTTAAAGAACTCACATTTATTTGGTCGCCAGCTTATTGCAGAGATTCTGTCAAAGCAGACACTAGTGTCAAAATCTACAAAATCTCGTGAGAACACTTTTCTTTTAAAAT
AATAAGAGTCAATTGTATTGATAAGTAAATAAAGACAGAGAGGGCGGAATAGGAGTCTTAAACAAATTTTAGGCGAAGGAGATGATAGGTGTTCTCCAATGAGTGCAGAT
CTCATTTGACATTAGATTATTGGGTTGAATAATGTGGAGACCAAAGATAGGATTATTTGTTAGTATGACTGTTCAACCCTTACATTGATTCTAATATATGTAGTGTATTT
ATTATGATATTGGAGACCGGAGCTTTTTGATAGAAATTGATTCATCAGTGAAAGGCAGAGAGGTAAGGATCTCTCATTTGCACCCTCAATAAATACTCCAAATATTGAAG
GCAATGGAAAACTGTTGATCAGTGGAGAAGGATTGAACACACTATACAGAAACAGTAGTGTGTGTTTACATGGGAAAAAAATATGTTAATCTGAATTGAACAAGATTGCG
GTCTTATTGGACTTGTTACATGTATGGTCTTGCAGACAAATACTATATACTTTTTTTTCCTCCATGAAAGTTCGGTTTATCTATATATATATCTGTCGTTCTAGTTTAGT
CACACAATGGATGATCCCCTTTTAGACCAGAAGGAATTAAGAAGGTACGTATCTTCCATTTGAATATTGACTATGCTTGTGTAGAAAAATCCTATAGTTGGGTTTCTTTA
GGACAATATCTCAAGAAGAAACATCTGGGATGCCAGTGTCAATAGGATATAGATGGATTCTATCTGACCATGCACTTCTTGCTTTTGGATCTATCTCAGAAATGCATTTC
CAGACTGCACTGTTACACTTGAACCCACTTCCAAATGCAATTTGCCAAACCCTATCTCCCCTTTTCACCTTTCCCTTTGCCTCAAGATAGTTGAGTTCATACCATACAGA
AGAAGATGAAGTATTGCCAAACCTGTATAAGGTCATTCTTGAAGCTTCTCCATCCTCCTTTTGCAGCTTCAGACTCCTCTCTACAGCATCAATAACTGCTTTACCACCGG
CGTGTATGCAGAAATGCTCAAAAGCCTTCTTGAAATTGGGCACATACACTTCTTTCCCCTTTGCTGGTGGCCAAATTTTCTCGGTGATCCAAGACCATCCATATAGGAGC
TGCTCTGAGTACGGCAACACAAGCGGGCCTAAAGCTGATATGTTTGTTGTAAGTGCTTTTGCTGCTACCTGAAGAAGATCTCGAGATAGCGAAACTCCAACATTCCC
Protein sequenceShow/hide protein sequence
MLFLLTDGYAHSIMISAFCRGGLLEEAKLLAKDFEATYDRYDIVMLNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFHILIKYFFKEKLYLLCYRTLEDMHRKGYQ
PEEELCSSLISSLGKIRAYSEAFSVYNILKYSKRTMCKALHEKILHILIAGRLLKDAYVVVKDNAGLISKPAIRKFAFGFMKFGNINLINDVMKAIHGSGYKIDQDLFMM
ATSRYIELPEKKDLFIQLLQWMPGQGYVVDSSTRNLILKNSHLFGRQLIAEILSKQTLVSKSTKSRENTFLLK