; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G013650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G013650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:24592871..24596848
RNA-Seq ExpressionLsi03G013650
SyntenyLsi03G013650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00818.1 uncharacterized protein E5676_scaffold1545G00190 [Cucumis melo var. makuwa]7.4e-5958.78Show/hide
Query:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM
        MAFA+KFLR  PRAFVFA SSSSSS FNPAR CC +FEP   FPTNFGS LCNR+ NL+LAFSGA GIYL   PLI                        
Subjt:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM

Query:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMD----------GEQKSCSLS------------------------LVARKVEVEDYKLLCVAKVEM
              GS+FSK TILG SVVLGSIS WPNASLAMD             K   LS                        LVARKVEVEDYK+LCVAKVEM
Subjt:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMD----------GEQKSCSLS------------------------LVARKVEVEDYKLLCVAKVEM

Query:  KHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN
        KHQ FTLV VLGGWWKWPPLSSDDEFIAFMDKLA LAHRL  +F+
Subjt:  KHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN

XP_004141102.1 uncharacterized protein LOC101216879 [Cucumis sativus]1.8e-5247.96Show/hide
Query:  MAFATKFLRQFPRAFVFA----SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYL
        MAFA+KFLR  PRAFVFA    SSSSSSF NPAR CC +FEP K FPTNFGS LCNR+ NL+LAFSGA GIYL   PL+                     
Subjt:  MAFATKFLRQFPRAFVFA----SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYL

Query:  TIMKRKILTGSKFSKGTILGASVVLGSISLWPNASLAM-----DGEQKSCSLS-----------------------------------------------
                 GS+ SK TILG SVVLGSI+ WPNAS AM     D  Q+    S                                               
Subjt:  TIMKRKILTGSKFSKGTILGASVVLGSISLWPNASLAM-----DGEQKSCSLS-----------------------------------------------

Query:  ------------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSI
                                      LVARKVEVEDYK+LCVAKVEMKHQ FT+V VLGGWWKWPPLSSDDEFIAFMDKLA LAHRLKSI
Subjt:  ------------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSI

XP_008443551.1 PREDICTED: uncharacterized protein LOC103487112 isoform X1 [Cucumis melo]1.6e-5349.15Show/hide
Query:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM
        MAFA+KFLR  PRAFVFA SSSSSS FNPAR CC +FEP   FPTNFGS LCNR+ NL+LAFSGA GIYL   PLI                        
Subjt:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM

Query:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMDG----------------------------------------------------------EQKSC
              GS+FSK TILG SVVLGSIS WPNASLAMD                                                             K  
Subjt:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMDG----------------------------------------------------------EQKSC

Query:  SLS------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN
         LS                        LVARKVEVEDYK+LCVAKVEMKHQ FTLV VLGGWWKWPPLSSDDEFIAFMDKLA LAHRL  +F+
Subjt:  SLS------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN

XP_008443552.1 PREDICTED: uncharacterized protein LOC103487112 isoform X2 [Cucumis melo]2.1e-5054.51Show/hide
Query:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKL-----DFFNFSFSLSSAE--Y
        MAFA+KFLR  PRAFVFA SSSSSS FNPAR CC +FEP   FPTNFGS LCNR+ NL+LAFSGA GIYL   PLI +L     +  + S  + SA+  +
Subjt:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKL-----DFFNFSFSLSSAE--Y

Query:  QVYLTIMKRKILTGS---KFSKGTILGASVVLGSISLWPN------------ASLAMDGEQKSCSLSLVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLG
        ++ L +    +L  +     +   ++   VVL  +S  P+            +S + +    +    LVARKVEVEDYK+LCVAKVEMKHQ FTLV VLG
Subjt:  QVYLTIMKRKILTGS---KFSKGTILGASVVLGSISLWPN------------ASLAMDGEQKSCSLSLVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLG

Query:  GWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN
        GWWKWPPLSSDDEFIAFMDKLA LAHRL  +F+
Subjt:  GWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN

XP_038903549.1 uncharacterized protein LOC120090109 [Benincasa hispida]2.9e-6352.58Show/hide
Query:  MAFATKFLRQFPRAFVFASSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIMK
        MAFA KFLR  PRAFVFASSSSSSFFNP R CCV+F+  K FPTNFGSLLCNR+SN +LAFSGANGIYLRKSPLI                         
Subjt:  MAFATKFLRQFPRAFVFASSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIMK

Query:  RKILTGSKFSKGTILGASVVLGSISLWPNASLAMDG----------------------------------------------------------EQKSCS
             GS+FSKGTILGASVV GSISLWPNASLAMD                                                             K   
Subjt:  RKILTGSKFSKGTILGASVVLGSISLWPNASLAMDG----------------------------------------------------------EQKSCS

Query:  LS------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIF
        LS                        L ARKVEVEDYKLLCVAKVEMKHQKFTLV +LGGWWKWPP SSDDEFIAFMDKLAFLAHRLKSI+
Subjt:  LS------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIF

TrEMBL top hitse value%identityAlignment
A0A0A0LI06 Uncharacterized protein8.5e-5347.96Show/hide
Query:  MAFATKFLRQFPRAFVFA----SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYL
        MAFA+KFLR  PRAFVFA    SSSSSSF NPAR CC +FEP K FPTNFGS LCNR+ NL+LAFSGA GIYL   PL+                     
Subjt:  MAFATKFLRQFPRAFVFA----SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYL

Query:  TIMKRKILTGSKFSKGTILGASVVLGSISLWPNASLAM-----DGEQKSCSLS-----------------------------------------------
                 GS+ SK TILG SVVLGSI+ WPNAS AM     D  Q+    S                                               
Subjt:  TIMKRKILTGSKFSKGTILGASVVLGSISLWPNASLAM-----DGEQKSCSLS-----------------------------------------------

Query:  ------------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSI
                                      LVARKVEVEDYK+LCVAKVEMKHQ FT+V VLGGWWKWPPLSSDDEFIAFMDKLA LAHRLKSI
Subjt:  ------------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSI

A0A1S3B8A6 uncharacterized protein LOC103487112 isoform X17.7e-5449.15Show/hide
Query:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM
        MAFA+KFLR  PRAFVFA SSSSSS FNPAR CC +FEP   FPTNFGS LCNR+ NL+LAFSGA GIYL   PLI                        
Subjt:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM

Query:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMDG----------------------------------------------------------EQKSC
              GS+FSK TILG SVVLGSIS WPNASLAMD                                                             K  
Subjt:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMDG----------------------------------------------------------EQKSC

Query:  SLS------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN
         LS                        LVARKVEVEDYK+LCVAKVEMKHQ FTLV VLGGWWKWPPLSSDDEFIAFMDKLA LAHRL  +F+
Subjt:  SLS------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN

A0A1S3B8D2 uncharacterized protein LOC103487112 isoform X21.0e-5054.51Show/hide
Query:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKL-----DFFNFSFSLSSAE--Y
        MAFA+KFLR  PRAFVFA SSSSSS FNPAR CC +FEP   FPTNFGS LCNR+ NL+LAFSGA GIYL   PLI +L     +  + S  + SA+  +
Subjt:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKL-----DFFNFSFSLSSAE--Y

Query:  QVYLTIMKRKILTGS---KFSKGTILGASVVLGSISLWPN------------ASLAMDGEQKSCSLSLVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLG
        ++ L +    +L  +     +   ++   VVL  +S  P+            +S + +    +    LVARKVEVEDYK+LCVAKVEMKHQ FTLV VLG
Subjt:  QVYLTIMKRKILTGS---KFSKGTILGASVVLGSISLWPN------------ASLAMDGEQKSCSLSLVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLG

Query:  GWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN
        GWWKWPPLSSDDEFIAFMDKLA LAHRL  +F+
Subjt:  GWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN

A0A5A7UGM7 Uncharacterized protein7.7e-5449.15Show/hide
Query:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM
        MAFA+KFLR  PRAFVFA SSSSSS FNPAR CC +FEP   FPTNFGS LCNR+ NL+LAFSGA GIYL   PLI                        
Subjt:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM

Query:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMDG----------------------------------------------------------EQKSC
              GS+FSK TILG SVVLGSIS WPNASLAMD                                                             K  
Subjt:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMDG----------------------------------------------------------EQKSC

Query:  SLS------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN
         LS                        LVARKVEVEDYK+LCVAKVEMKHQ FTLV VLGGWWKWPPLSSDDEFIAFMDKLA LAHRL  +F+
Subjt:  SLS------------------------LVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN

A0A5D3BP24 Uncharacterized protein3.6e-5958.78Show/hide
Query:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM
        MAFA+KFLR  PRAFVFA SSSSSS FNPAR CC +FEP   FPTNFGS LCNR+ NL+LAFSGA GIYL   PLI                        
Subjt:  MAFATKFLRQFPRAFVFA-SSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIM

Query:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMD----------GEQKSCSLS------------------------LVARKVEVEDYKLLCVAKVEM
              GS+FSK TILG SVVLGSIS WPNASLAMD             K   LS                        LVARKVEVEDYK+LCVAKVEM
Subjt:  KRKILTGSKFSKGTILGASVVLGSISLWPNASLAMD----------GEQKSCSLS------------------------LVARKVEVEDYKLLCVAKVEM

Query:  KHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN
        KHQ FTLV VLGGWWKWPPLSSDDEFIAFMDKLA LAHRL  +F+
Subjt:  KHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCGCCACAAAGTTTCTTCGCCAGTTCCCCAGAGCTTTCGTGTTCGCTTCGTCTTCATCTTCTTCCTTCTTCAATCCCGCCAGATGCTGTTGTGTGAGATTTGA
GCCCTTAAAACCGTTTCCGACGAACTTCGGATCATTACTCTGCAACCGCGTTTCCAATCTCAAACTTGCATTTTCTGGCGCTAATGGAATTTATCTGCGGAAATCTCCTT
TGATAGGTAAGCTTGATTTCTTCAACTTTTCATTTTCCCTATCATCTGCTGAATATCAAGTATATCTTACAATAATGAAAAGGAAAATTCTAACAGGAAGTAAGTTTAGC
AAGGGAACCATTTTGGGTGCATCAGTAGTACTTGGATCGATCAGTTTGTGGCCCAATGCTTCATTGGCTATGGACGGTGAGCAAAAATCTTGTTCTTTGTCTTTGGTTGC
AAGAAAAGTTGAAGTTGAAGACTACAAGCTTCTATGTGTGGCCAAAGTTGAAATGAAACATCAAAAGTTCACTCTTGTGGTAGTTCTTGGAGGTTGGTGGAAATGGCCAC
CACTATCTTCTGACGATGAATTCATTGCTTTTATGGATAAACTAGCTTTCCTTGCACATCGCCTAAAATCTATATTTAATTATAGGCTAAATATATAA
mRNA sequenceShow/hide mRNA sequence
TTGACATTGACCTTTGACGCAAGTCTCGAGGATTTTTCAGTGATCATACGAATCGATTGAATTTGTTATTCGAAAATTTGTGCATGGCCTTCGCCACAAAGTTTCTTCGC
CAGTTCCCCAGAGCTTTCGTGTTCGCTTCGTCTTCATCTTCTTCCTTCTTCAATCCCGCCAGATGCTGTTGTGTGAGATTTGAGCCCTTAAAACCGTTTCCGACGAACTT
CGGATCATTACTCTGCAACCGCGTTTCCAATCTCAAACTTGCATTTTCTGGCGCTAATGGAATTTATCTGCGGAAATCTCCTTTGATAGGTAAGCTTGATTTCTTCAACT
TTTCATTTTCCCTATCATCTGCTGAATATCAAGTATATCTTACAATAATGAAAAGGAAAATTCTAACAGGAAGTAAGTTTAGCAAGGGAACCATTTTGGGTGCATCAGTA
GTACTTGGATCGATCAGTTTGTGGCCCAATGCTTCATTGGCTATGGACGGTGAGCAAAAATCTTGTTCTTTGTCTTTGGTTGCAAGAAAAGTTGAAGTTGAAGACTACAA
GCTTCTATGTGTGGCCAAAGTTGAAATGAAACATCAAAAGTTCACTCTTGTGGTAGTTCTTGGAGGTTGGTGGAAATGGCCACCACTATCTTCTGACGATGAATTCATTG
CTTTTATGGATAAACTAGCTTTCCTTGCACATCGCCTAAAATCTATATTTAATTATAGGCTAAATATATAA
Protein sequenceShow/hide protein sequence
MAFATKFLRQFPRAFVFASSSSSSFFNPARCCCVRFEPLKPFPTNFGSLLCNRVSNLKLAFSGANGIYLRKSPLIGKLDFFNFSFSLSSAEYQVYLTIMKRKILTGSKFS
KGTILGASVVLGSISLWPNASLAMDGEQKSCSLSLVARKVEVEDYKLLCVAKVEMKHQKFTLVVVLGGWWKWPPLSSDDEFIAFMDKLAFLAHRLKSIFNYRLNI