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Lsi03G013660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G013660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCytochrome c oxidase subunit 5C
Genome locationchr03:24597035..24601839
RNA-Seq ExpressionLsi03G013660
SyntenyLsi03G013660
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017774.1 putative cytochrome c oxidase subunit 5C-4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-1648.95Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDREVEDALLRSSWTEKDYGRFDNNRVGLLLQLEPRNFLDMIQNELISMSIE
        MVG V  YKGPS+IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDR                GR           + P+  +D            
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDREVEDALLRSSWTEKDYGRFDNNRVGLLLQLEPRNFLDMIQNELISMSIE

Query:  VLKELVGFEFSSPKSPLLEGKL---EEELESVDVQEETSSLET
           E  GF        + EGKL   EEE ESVDV EETSSLET
Subjt:  VLKELVGFEFSSPKSPLLEGKL---EEELESVDVQEETSSLET

KAG8384850.1 hypothetical protein BUALT_Bualt04G0161300 [Buddleja alternifolia]9.1e-1676.36Show/hide
Query:  WRKEMVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        +++ M  HV  YKGPSIIKEI+ G GLGL+AGGLWKMHHWNNQRRTKEFY+LLDR
Subjt:  WRKEMVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

XP_022935291.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita moschata]9.1e-1684.31Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        MVG V  YKGPS+IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDR
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

XP_023528587.1 putative cytochrome c oxidase subunit 5C-4 [Cucurbita pepo subsp. pepo]5.3e-1684.31Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        MVG+V  YKGPS+IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDR
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

XP_038906018.1 putative cytochrome c oxidase subunit 5C-4 [Benincasa hispida]4.8e-1786.27Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        MVG VA YKGPSIIKEI+YG G+GLMAGGLWKMHHWN QR+TKEFYELLDR
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

TrEMBL top hitse value%identityAlignment
A0A200RDF8 Cytochrome c oxidase subunit Vc1.1e-1473.21Show/hide
Query:  GWRKEMVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        G  + +  H A YKGPSIIKEIMYG  LGL+AGGLWKMHHWNNQRRTKEFY+LL++
Subjt:  GWRKEMVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

A0A2G3ABW9 Cytochrome c oxidase subunit 5C1.4e-1453.85Show/hide
Query:  VGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDREV------EDALLR----SSWTEKDYGR
        V HVA YKGPS++KEI+ G  LG++AGG WKMHHWNNQRRTKEFY++L+++       E+ L+     SSW+   YG+
Subjt:  VGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDREV------EDALLR----SSWTEKDYGR

A0A5J5C3H0 Uncharacterized protein1.1e-1462.3Show/hide
Query:  VGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDREVEDALLRSSW
        +GH A Y GPS++KEI+YG  LGLMAGGLWKMHHWN QRRTKEFY+LL++ V   ++   +
Subjt:  VGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDREVEDALLRSSW

A0A6J1F554 putative cytochrome c oxidase subunit 5C-44.4e-1684.31Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        MVG V  YKGPS+IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDR
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

A0A6J1IZ83 putative cytochrome c oxidase subunit 5C-47.5e-1684.31Show/hide
Query:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        MVG+V  YKGPS IKEI+YG G+GLMAGGLWKMHHWN QRRTKEFYELLDR
Subjt:  MVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

SwissProt top hitse value%identityAlignment
O22912 Probable cytochrome c oxidase subunit 5C-12.6e-1361.11Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        M GH    A  KGPS++KE+  G  LGL AGGLWKMHHWN QR+T+ FY+LL+R
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

P19173 Cytochrome c oxidase subunit 5C2.7e-1566.67Show/hide
Query:  GHVAN--YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        GHVA+  YKGPS++KE++ G  LGL+AGG WKMHHWN+QRRTKEFY++L++
Subjt:  GHVAN--YKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

Q9FLK2 Probable cytochrome c oxidase subunit 5C-34.4e-1361.11Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+R
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

Q9FNE0 Putative cytochrome c oxidase subunit 5C-42.1e-1573.91Show/hide
Query:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        A YKGPS++KEI+YG  LG   GGLWKMHHWNNQRRTKEFY+LL++
Subjt:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

Q9LZQ0 Cytochrome c oxidase subunit 5C-23.3e-1361.11Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+R
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein1.8e-1461.11Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        M GH    A  KGPS++KE+  G  LGL AGGLWKMHHWN QR+T+ FY+LL+R
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

AT5G40382.1 Cytochrome c oxidase subunit Vc family protein1.5e-1673.91Show/hide
Query:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        A YKGPS++KEI+YG  LG   GGLWKMHHWNNQRRTKEFY+LL++
Subjt:  ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein3.1e-1461.11Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+R
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein3.1e-1461.11Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+R
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein3.1e-1461.11Show/hide
Query:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR
        M GH    A  KGPS++KE++ G  LGL AGGLWKMHHWN QR+T+ FY+LL+R
Subjt:  MVGHV---ANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGTTGGAGAAAGGAAATGGTGGGCCATGTTGCAAATTACAAGGGACCAAGCATAATAAAGGAGATAATGTATGGAACGGGGCTTGGCCTAATGGCTGGTGGCCT
TTGGAAAATGCACCATTGGAATAATCAAAGGAGAACCAAAGAGTTCTATGAGTTGCTTGATCGAGAAGTAGAAGACGCTTTGTTGAGATCTTCGTGGACAGAAAAAGATT
ATGGTCGATTTGATAACAATCGAGTGGGATTGCTTCTTCAGCTTGAACCTAGGAATTTTTTAGATATGATACAAAACGAATTGATCTCTATGAGTATTGAAGTTTTGAAG
GAGTTGGTTGGATTTGAATTCAGTTCACCAAAATCTCCACTTCTTGAAGGCAAGTTAGAAGAAGAACTTGAATCTGTTGATGTGCAAGAAGAAACTTCAAGTTTGGAAAC
TGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGTTGGAGAAAGGAAATGGTGGGCCATGTTGCAAATTACAAGGGACCAAGCATAATAAAGGAGATAATGTATGGAACGGGGCTTGGCCTAATGGCTGGTGGCCT
TTGGAAAATGCACCATTGGAATAATCAAAGGAGAACCAAAGAGTTCTATGAGTTGCTTGATCGAGAAGTAGAAGACGCTTTGTTGAGATCTTCGTGGACAGAAAAAGATT
ATGGTCGATTTGATAACAATCGAGTGGGATTGCTTCTTCAGCTTGAACCTAGGAATTTTTTAGATATGATACAAAACGAATTGATCTCTATGAGTATTGAAGTTTTGAAG
GAGTTGGTTGGATTTGAATTCAGTTCACCAAAATCTCCACTTCTTGAAGGCAAGTTAGAAGAAGAACTTGAATCTGTTGATGTGCAAGAAGAAACTTCAAGTTTGGAAAC
TGCATGA
Protein sequenceShow/hide protein sequence
MGGWRKEMVGHVANYKGPSIIKEIMYGTGLGLMAGGLWKMHHWNNQRRTKEFYELLDREVEDALLRSSWTEKDYGRFDNNRVGLLLQLEPRNFLDMIQNELISMSIEVLK
ELVGFEFSSPKSPLLEGKLEEELESVDVQEETSSLETA