; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G013810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G013810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:24758572..24759432
RNA-Seq ExpressionLsi03G013810
SyntenyLsi03G013810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053662.1 hypothetical protein E6C27_scaffold135G00340 [Cucumis melo var. makuwa]3.2e-7862.85Show/hide
Query:  MNSDPKSVNDKRKKNQDHN--PPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERD
        MNSDPKSVNDK K NQDHN   P KD K+KQK++D+                  YEDSFSLYP Y  E          E N+ NIG+F++V FE  RERD
Subjt:  MNSDPKSVNDKRKKNQDHN--PPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERD

Query:  DS-RAESSKRKRIA---KSPQVIDLSS-KSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSN
        D  R ESSKRKR +    SP++IDL+S  S N EP+KLIEEIV+IYSDYIEH+F+MAKDRFNDEQRWNFDK  CS LA++FSQK++RLGIELKEMKK+ N
Subjt:  DS-RAESSKRKRIA---KSPQVIDLSS-KSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSN

Query:  QREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRI
        Q      I+  V QI NQLEKMHERFDSS NIRASS R CR++ELILCI+EI EMR+ELY II RIEE+K ++MK KTMEI+QRNLRI
Subjt:  QREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRI

KAE8647737.1 hypothetical protein Csa_003765 [Cucumis sativus]1.1e-1730.53Show/hide
Query:  RKKNQDHNPPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAESSKRKRIA
        ++K  D +P   D K K K  D + Q  D + +QK +DL D +    L  +   +++L+  +      + N+           RER D  AES KR R+ 
Subjt:  RKKNQDHNPPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAESSKRKRIA

Query:  KSPQVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQ
        +       SS  P+ E LKLIEEIV++Y  +++H+ +  ++   D+  W+F+      + E F +K+ RLG EL+ MK +  Q   Y  IE R+ QIM  
Subjt:  KSPQVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQ

Query:  LEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTME
        + K+HE FD         ++ C +    +C   +   R+E+  + WR+E LK++K  +K  E
Subjt:  LEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTME

KAG6594502.1 hypothetical protein SDJN03_11055, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4040.33Show/hide
Query:  MNSDPKSVND--------KRKKNQDHNPP------PKDLKLK--QKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIG
        M+ DPK  +D        K+K  +D   P       + L++   +++E  N  P D + K   +     +D  S YPQ+  E+ L +  +  E+ + N+ 
Subjt:  MNSDPKSVND--------KRKKNQDHNPP------PKDLKLK--QKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIG

Query:  SFLEVRFEGIRERDDSRAESSKRKRIAKSPQVIDLSSKSPN--------------FEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGL
          +  RFE +RER++   ESSKR R  +SP+VI L + S +               EPL L+EEIV +YS YI+HI  MA++RFNDE RWNF +  C GL
Subjt:  SFLEVRFEGIRERDDSRAESSKRKRIAKSPQVIDLSSKSPN--------------FEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGL

Query:  AEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKK
        AEIF + I+ LG EL  MK + +Q + Y++I  R+RQIMNQLE MHE FD SPNI AS++ NC K+ELI C++E+++ +K+LYEI   +  LK + M  K
Subjt:  AEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKK

KGN59675.1 hypothetical protein Csa_002140 [Cucumis sativus]7.7e-8866.9Show/hide
Query:  MNSDPKSVNDKRKKNQDHNPPPKDLKLKQKV-EDLNYQPT-DLKMKQKVEDLYD---YEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIR
        MNSDPKSVNDK K NQDHNPPPK LK+KQKV ED NYQP  D KM QK++D  D   Y D FSLYP+Y +E          + N+ NIGSF++V FE  R
Subjt:  MNSDPKSVNDKRKKNQDHNPPPKDLKLKQKV-EDLNYQPT-DLKMKQKVEDLYD---YEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIR

Query:  ER--DDSRAESSKRKRIAKSP--QVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKN
        ++  DD R ESSKRKRI KSP  ++IDL+S S + EP+KLIEEIV+IYSDYIEH+F+M KDRFNDEQRWNFDKT CS LAEIF QK++RLGIEL EMKK+
Subjt:  ER--DDSRAESSKRKRIAKSP--QVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKN

Query:  SNQREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRI
         NQRE Y +I+ RV QI NQLEKMH+RFDSS NIRAS++R C + ELILCI+EI EM KELY I  RIEELK ++MK KTMEI+QRNLRI
Subjt:  SNQREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRI

XP_023518166.1 uncharacterized protein LOC111781710 [Cucurbita pepo subsp. pepo]1.0e-3944.98Show/hide
Query:  QPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAESSKRKRIAKSPQVIDLSSKSPN-----------
        Q  D + KQK+ D     D  S YPQ+  E+ L +  +  E+ + N+   +  RFE +RER++   ESSKR R  +SP+VI L + S +           
Subjt:  QPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAESSKRKRIAKSPQVIDLSSKSPN-----------

Query:  ---FEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQLEKMHERFDSS
            EPLKL+EEIV +YS YI+HI  MA++RF DE +WNF +  C GLAEIF + I+ LG EL  MK + +Q + Y++I  R+RQIMNQLE MHE FD S
Subjt:  ---FEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQLEKMHERFDSS

Query:  PNIRASSRRNCRKEELILCIDEISEMRKE
        PNI AS++ NC K+ELI C++E+++ +K+
Subjt:  PNIRASSRRNCRKEELILCIDEISEMRKE

TrEMBL top hitse value%identityAlignment
A0A0A0KI09 Uncharacterized protein5.3e-1830.53Show/hide
Query:  RKKNQDHNPPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAESSKRKRIA
        ++K  D +P   D K K K  D + Q  D + +QK +DL D +    L  +   +++L+  +      + N+           RER D  AES KR R+ 
Subjt:  RKKNQDHNPPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAESSKRKRIA

Query:  KSPQVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQ
        +       SS  P+ E LKLIEEIV++Y  +++H+ +  ++   D+  W+F+      + E F +K+ RLG EL+ MK +  Q   Y  IE R+ QIM  
Subjt:  KSPQVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQ

Query:  LEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTME
        + K+HE FD         ++ C +    +C   +   R+E+  + WR+E LK++K  +K  E
Subjt:  LEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTME

A0A0A0KKJ1 Uncharacterized protein2.6e-0927.85Show/hide
Query:  KEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAE-SSKRKRIAKSPQVIDLSSKSP----------NFEPLKLIEEIVRIYSDYIEHIFKMAKDR
        +EK+  +  + S L  G      +++ E  +E D   +E S+KR R A+S +V   S K+             +PL+++EEIV  Y D+I  I++M KD 
Subjt:  KEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAE-SSKRKRIAKSPQVIDLSSKSP----------NFEPLKLIEEIVRIYSDYIEHIFKMAKDR

Query:  FN----DEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMR
                Q+W +     + + E  ++ ++ + IE++ MK       +Y + +  V  ++  L  ++ER +SSPN +  S    R E L +C+DE+   +
Subjt:  FN----DEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMR

Query:  KELYEIIWRIEELKNIKMK
        +EL E+   I+ELK + ++
Subjt:  KELYEIIWRIEELKNIKMK

A0A0A0LCD3 Uncharacterized protein3.7e-8866.9Show/hide
Query:  MNSDPKSVNDKRKKNQDHNPPPKDLKLKQKV-EDLNYQPT-DLKMKQKVEDLYD---YEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIR
        MNSDPKSVNDK K NQDHNPPPK LK+KQKV ED NYQP  D KM QK++D  D   Y D FSLYP+Y +E          + N+ NIGSF++V FE  R
Subjt:  MNSDPKSVNDKRKKNQDHNPPPKDLKLKQKV-EDLNYQPT-DLKMKQKVEDLYD---YEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIR

Query:  ER--DDSRAESSKRKRIAKSP--QVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKN
        ++  DD R ESSKRKRI KSP  ++IDL+S S + EP+KLIEEIV+IYSDYIEH+F+M KDRFNDEQRWNFDKT CS LAEIF QK++RLGIEL EMKK+
Subjt:  ER--DDSRAESSKRKRIAKSP--QVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKN

Query:  SNQREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRI
         NQRE Y +I+ RV QI NQLEKMH+RFDSS NIRAS++R C + ELILCI+EI EM KELY I  RIEELK ++MK KTMEI+QRNLRI
Subjt:  SNQREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRI

A0A5A7UD05 Uncharacterized protein1.6e-7862.85Show/hide
Query:  MNSDPKSVNDKRKKNQDHN--PPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERD
        MNSDPKSVNDK K NQDHN   P KD K+KQK++D+                  YEDSFSLYP Y  E          E N+ NIG+F++V FE  RERD
Subjt:  MNSDPKSVNDKRKKNQDHN--PPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERD

Query:  DS-RAESSKRKRIA---KSPQVIDLSS-KSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSN
        D  R ESSKRKR +    SP++IDL+S  S N EP+KLIEEIV+IYSDYIEH+F+MAKDRFNDEQRWNFDK  CS LA++FSQK++RLGIELKEMKK+ N
Subjt:  DS-RAESSKRKRIA---KSPQVIDLSS-KSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSN

Query:  QREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRI
        Q      I+  V QI NQLEKMHERFDSS NIRASS R CR++ELILCI+EI EMR+ELY II RIEE+K ++MK KTMEI+QRNLRI
Subjt:  QREKYYLIEHRVRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRI

A0A5D3CSR5 Uncharacterized protein4.2e-1531.6Show/hide
Query:  KRKKNQDHNPPPKDLKLKQKV----EDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGN--IGSFLEVRFEGIRERDDSRAES
        K+ K+ DH P   D K K K     +D + QP D + +Q +++LYD        P+ LK K+     +  +L   +  + S      EG RER D  AES
Subjt:  KRKKNQDHNPPPKDLKLKQKV----EDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGN--IGSFLEVRFEGIRERDDSRAES

Query:  SKRKRIAKSPQVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHR
         KR R+ +        S  P+ E LKLIEEIV++Y  +++H+ +  K    DE  W+F+      + E F +K+ RLG EL+ MK +  Q   Y  IE R
Subjt:  SKRKRIAKSPQVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHR

Query:  VRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTME
        + QIM  + K+HE FD         ++ C +    +C   +   R+E+  +  R++ LK++K  ++  E
Subjt:  VRQIMNQLEKMHERFDSSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTME

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCAGATCCGAAATCCGTGAACGATAAGCGCAAGAAAAATCAAGATCATAATCCGCCACCAAAGGATCTGAAATTGAAACAAAAAGTTGAAGACCTCAATTATCA
GCCAACGGATTTGAAAATGAAACAAAAAGTTGAAGATCTCTATGACTATGAAGATTCATTTTCATTATATCCTCAATATCTTAAGGAGAAAGAACTGAATCTAGGAAATA
TCGGAAGTGAATTGAATCTAGGAAATATTGGAAGTTTCCTCGAAGTTCGTTTCGAAGGAATTAGAGAAAGGGACGATTCTAGGGCAGAATCATCGAAAAGAAAAAGAATC
GCAAAATCTCCCCAAGTGATTGATTTGAGTTCGAAGTCGCCTAATTTTGAGCCACTGAAATTAATCGAGGAAATCGTGAGGATTTACAGTGATTACATTGAACACATATT
TAAAATGGCGAAGGACAGATTCAACGACGAACAGAGATGGAATTTTGATAAAACTATGTGTAGCGGTCTGGCTGAGATTTTTTCACAAAAAATCGAGAGATTGGGAATCG
AATTAAAAGAAATGAAGAAGAATTCGAATCAAAGAGAGAAGTATTACCTGATAGAGCATCGTGTTCGTCAAATTATGAATCAACTGGAAAAGATGCACGAGCGATTTGAT
AGCTCTCCAAATATTAGGGCTTCGTCGAGGAGGAACTGCAGGAAAGAAGAACTGATATTATGTATAGATGAAATTAGTGAGATGAGGAAAGAATTGTATGAGATAATATG
GAGAATTGAAGAACTGAAAAACATTAAAATGAAGAAGAAGACGATGGAGATAAAACAGAGGAATTTGAGAATTGGAAGCAAAGATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCAGATCCGAAATCCGTGAACGATAAGCGCAAGAAAAATCAAGATCATAATCCGCCACCAAAGGATCTGAAATTGAAACAAAAAGTTGAAGACCTCAATTATCA
GCCAACGGATTTGAAAATGAAACAAAAAGTTGAAGATCTCTATGACTATGAAGATTCATTTTCATTATATCCTCAATATCTTAAGGAGAAAGAACTGAATCTAGGAAATA
TCGGAAGTGAATTGAATCTAGGAAATATTGGAAGTTTCCTCGAAGTTCGTTTCGAAGGAATTAGAGAAAGGGACGATTCTAGGGCAGAATCATCGAAAAGAAAAAGAATC
GCAAAATCTCCCCAAGTGATTGATTTGAGTTCGAAGTCGCCTAATTTTGAGCCACTGAAATTAATCGAGGAAATCGTGAGGATTTACAGTGATTACATTGAACACATATT
TAAAATGGCGAAGGACAGATTCAACGACGAACAGAGATGGAATTTTGATAAAACTATGTGTAGCGGTCTGGCTGAGATTTTTTCACAAAAAATCGAGAGATTGGGAATCG
AATTAAAAGAAATGAAGAAGAATTCGAATCAAAGAGAGAAGTATTACCTGATAGAGCATCGTGTTCGTCAAATTATGAATCAACTGGAAAAGATGCACGAGCGATTTGAT
AGCTCTCCAAATATTAGGGCTTCGTCGAGGAGGAACTGCAGGAAAGAAGAACTGATATTATGTATAGATGAAATTAGTGAGATGAGGAAAGAATTGTATGAGATAATATG
GAGAATTGAAGAACTGAAAAACATTAAAATGAAGAAGAAGACGATGGAGATAAAACAGAGGAATTTGAGAATTGGAAGCAAAGATTTGTGA
Protein sequenceShow/hide protein sequence
MNSDPKSVNDKRKKNQDHNPPPKDLKLKQKVEDLNYQPTDLKMKQKVEDLYDYEDSFSLYPQYLKEKELNLGNIGSELNLGNIGSFLEVRFEGIRERDDSRAESSKRKRI
AKSPQVIDLSSKSPNFEPLKLIEEIVRIYSDYIEHIFKMAKDRFNDEQRWNFDKTMCSGLAEIFSQKIERLGIELKEMKKNSNQREKYYLIEHRVRQIMNQLEKMHERFD
SSPNIRASSRRNCRKEELILCIDEISEMRKELYEIIWRIEELKNIKMKKKTMEIKQRNLRIGSKDL