; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G014230 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G014230
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNase H domain-containing protein
Genome locationchr03:25187235..25196370
RNA-Seq ExpressionLsi03G014230
SyntenyLsi03G014230
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150130.1 uncharacterized protein LOC111018384 [Momordica charantia]4.5e-13471.05Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKG V GFY+SLKE E Q GC IFDPNATIYKG+HLSKEAEQYLAS GLQSATYSISAANVT+DLFGKLLAC  EQ S+ RG+  EE  
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQ--------------------------AHETVQ-
         A R  QV    EYGFVGANWVS DSPKQEIIWDHGFEA+PASSSC+ S SRGKMAE YS AKR  Q                           HETV+ 
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQ--------------------------AHETVQ-

Query:  ------------------------------STYFLEFDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVR
                                       TYFLEFDGASKGNPGLAGAGAV+RA DGS VCRLQEGVGIATNNVAEYRAVILGLKHALK+G KHIRV+
Subjt:  ------------------------------STYFLEFDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVR

Query:  GDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK
        GDSKLVCMQVQGLWK+KN NM +LCKVAKELKDKF SFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK
Subjt:  GDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK

XP_022989146.1 uncharacterized protein LOC111486303 [Cucurbita maxima]1.8e-13079.11Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYRS KELE QAG LIFDPNATIYKG+HLSKE+EQYLAS GL+SATYSISAANVT DLFGKLLACP EQ S+TRGKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN
        KAKRQ  V ENTE GFV A+ VS DSPKQEI  DHG EA+PASSS                              YFLEFDGASKGNPGLAGAGAV+RAN
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN

Query:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR
        DG+ +CRLQEGVGIATNNVAEYRAVILGLKHALKSG KHI VRGDSKLVCMQVQGLWKLKNQNMA LCKVAK+LKDKF SFEI+HIPREQNSDADALANR
Subjt:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR

Query:  AIHLRDGVVVEDCKHK
        AI+LRDG+VVEDCKHK
Subjt:  AIHLRDGVVVEDCKHK

XP_023529762.1 uncharacterized protein LOC111792488 [Cucurbita pepo subsp. pepo]2.3e-13079.11Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYRS KELE QAG LIFDPNATIYKG+HLSKE+EQYLAS GLQSATYSISAANVT DLFGKLLACP EQ S+T GKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN
        KAKRQ  V ENTE GFVG + VS DSPKQEI  DHG EA+PASSS                              YFLEFDGASKGNPGLAGAGAV+RAN
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN

Query:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR
        DG+ +CRLQEGVGIATNNVAEYRAVILGLKHALKSG KHI VRGDSKLVCMQVQGLWKLKNQNMA LCKVAK+LKDKF SFEI+HIPREQNSDADALANR
Subjt:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR

Query:  AIHLRDGVVVEDCKHK
        AI+LRDG+VVEDCKHK
Subjt:  AIHLRDGVVVEDCKHK

XP_038906127.1 uncharacterized protein LOC120092011 isoform X1 [Benincasa hispida]1.9e-14882.08Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKGDVFGFYRSLKEL+ QAG LIFDPNATIYKG+HLSKEAE YLAS GLQSATYSISAANVTKDLFGKLLACP EQ  A RGKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEY------------------------------GFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHE
        K KRQEQV EN EY                              GFVGANWVS DSPKQE I DHGF A+PAS S QPSVSRGKMAE YSEA RSQQAHE
Subjt:  KAKRQEQVLENTEY------------------------------GFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHE

Query:  TVQSTYFLEFDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKV
        TVQ TYFLEFDGASKGNPGLAGAGAV+RANDGS VCRLQEGVG+ATNNVAEYRAVILGLKHALK GIKHI V+GDSKLVCMQVQGLWKLKNQNMA LCKV
Subjt:  TVQSTYFLEFDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKV

Query:  AKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK
        AKELKDKF SFEISHIPREQNSDAD LANRAIHLRDGVVVEDCKHK
Subjt:  AKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK

XP_038906129.1 uncharacterized protein LOC120092011 isoform X3 [Benincasa hispida]1.6e-13983.12Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKGDVFGFYRSLKEL+ QAG LIFDPNATIYKG+HLSKEAE YLAS GLQSATYSISAANVTKDLFGKLLACP E     R  ++ E P
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAK----RQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAV
        K +       + +  + +GFVGANWVS DSPKQE I DHGF A+PAS S QPSVSRGKMAE YSEA RSQQAHETVQ TYFLEFDGASKGNPGLAGAGAV
Subjt:  KAK----RQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAV

Query:  IRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADA
        +RANDGS VCRLQEGVG+ATNNVAEYRAVILGLKHALK GIKHI V+GDSKLVCMQVQGLWKLKNQNMA LCKVAKELKDKF SFEISHIPREQNSDAD 
Subjt:  IRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADA

Query:  LANRAIHLRDGVVVEDCKHK
        LANRAIHLRDGVVVEDCKHK
Subjt:  LANRAIHLRDGVVVEDCKHK

TrEMBL top hitse value%identityAlignment
A0A0A0LHV8 RNase H domain-containing protein3.5e-10869.3Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLAC-PDEQLSATRGKMAEEY
        MEGDKDAYYVV KGDVFGFYR+ KEL T  G   FDP+ATIYKG+HLSKEAE+YL + GLQSATYSISAANVTKDLFGK+L C P EQ SATRGKMAEEY
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLAC-PDEQLSATRGKMAEEY

Query:  PKAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN
         KA+RQE+VLENTEY                                                           TYFLEFDGASKGNPGLAGAGAV+RAN
Subjt:  PKAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN

Query:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR
        DGS VC+LQEGVGIAT NVAEYRAVILGLKHALK+GIKHIRV+GDSKLVCMQVQGLWKLKN NMAK CKVAKELKDKF SFEISH PR+QNSDADALAN 
Subjt:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR

Query:  AIHLRDGVVVEDCKHK
        AI L+DGVVVEDC HK
Subjt:  AIHLRDGVVVEDCKHK

A0A1S3B7N6 uncharacterized protein LOC103487060 isoform X15.2e-11270.57Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLAC-PDEQLSATRGKMAEEY
        MEGDKDAYYVVQKGDVFGFYRS KEL TQ G   FDPNATIYKG+HLSKEAE+YL S GLQSATYSISAANVTKDLFGK+L C P EQ S TRGKMAEEY
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLAC-PDEQLSATRGKMAEEY

Query:  PKAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN
        PKA+RQE+VL+NTEY                                                           TYFLEFDGASKGNPGLAGAGA++RAN
Subjt:  PKAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN

Query:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR
        DGS VCRLQEGVGIAT NVAEYRA+ILGLKHALK+GIKHI V+GDSKLVCMQVQGLWKLKNQNMA+LCKVAKELKDKF SFEISH+PR +NSDADALANR
Subjt:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR

Query:  AIHLRDGVVVEDCKHK
        AIHL+DGVVVEDC HK
Subjt:  AIHLRDGVVVEDCKHK

A0A6J1D7M4 uncharacterized protein LOC1110183842.2e-13471.05Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVVQKG V GFY+SLKE E Q GC IFDPNATIYKG+HLSKEAEQYLAS GLQSATYSISAANVT+DLFGKLLAC  EQ S+ RG+  EE  
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQ--------------------------AHETVQ-
         A R  QV    EYGFVGANWVS DSPKQEIIWDHGFEA+PASSSC+ S SRGKMAE YS AKR  Q                           HETV+ 
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQ--------------------------AHETVQ-

Query:  ------------------------------STYFLEFDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVR
                                       TYFLEFDGASKGNPGLAGAGAV+RA DGS VCRLQEGVGIATNNVAEYRAVILGLKHALK+G KHIRV+
Subjt:  ------------------------------STYFLEFDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVR

Query:  GDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK
        GDSKLVCMQVQGLWK+KN NM +LCKVAKELKDKF SFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK
Subjt:  GDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK

A0A6J1EJI9 uncharacterized protein LOC1114350649.5e-13078.8Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYRS KELE QAG LIFDPNATIYKG+HLSKE+EQYLAS GL+SATYSISAANVT DLFGKLLACP EQ S+TRG+MAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN
        KAKRQ  V ENTE GFVGA+ VS DS KQEI  DH  EA+PASSS                              YFLEFDGASKGNPGLAGAGAV+RAN
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN

Query:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR
        DG+ +CRLQEGVGIATNNVAEYRAVILGLKHALKSG KHI VRGDSKLVCMQVQGLWKLKNQNMA LCKVAK+LKDKF SFEI+HIPREQNSDADALANR
Subjt:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR

Query:  AIHLRDGVVVEDCKHK
        AIHLRDG+VVEDCKHK
Subjt:  AIHLRDGVVVEDCKHK

A0A6J1JJ82 uncharacterized protein LOC1114863038.6e-13179.11Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        MEGDKDAYYVV+KGDVFGFYRS KELE QAG LIFDPNATIYKG+HLSKE+EQYLAS GL+SATYSISAANVT DLFGKLLACP EQ S+TRGKMAEEYP
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN
        KAKRQ  V ENTE GFV A+ VS DSPKQEI  DHG EA+PASSS                              YFLEFDGASKGNPGLAGAGAV+RAN
Subjt:  KAKRQEQVLENTEYGFVGANWVS-DSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAN

Query:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR
        DG+ +CRLQEGVGIATNNVAEYRAVILGLKHALKSG KHI VRGDSKLVCMQVQGLWKLKNQNMA LCKVAK+LKDKF SFEI+HIPREQNSDADALANR
Subjt:  DGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANR

Query:  AIHLRDGVVVEDCKHK
        AI+LRDG+VVEDCKHK
Subjt:  AIHLRDGVVVEDCKHK

SwissProt top hitse value%identityAlignment
F9VN79 Ribonuclease HI1.4e-0836.3Show/hide
Query:  FDG--ASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIA--------TNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCK
        FDG    K   G+A  G VI  ++     R  EG G+A        TNNVAEY  +I  ++  L+ GI    ++GDS+LV  Q+ G +K+K + +  L +
Subjt:  FDG--ASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIA--------TNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCK

Query:  VAKELKDKFGSFEISHIPREQNSDADALANRAIHL
         A ELK K  +  +  +PRE+N +AD L+  A  L
Subjt:  VAKELKDKFGSFEISHIPREQNSDADALANRAIHL

P64956 Uncharacterized protein Mb2253c2.9e-1945.24Show/hide
Query:  LEFDGASKGNPGLAGAGAVIRANDGSAV-CRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKD
        +E DG S+GNPG AG GAV+   D S V    ++ +G ATNNVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+ ++ KL   A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVIRANDGSAV-CRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKD

Query:  KFGSFEISHIPREQNSDADALANRAI
        +F       +PR +N+ AD LAN A+
Subjt:  KFGSFEISHIPREQNSDADALANRAI

P9WLH4 Uncharacterized protein MT22872.9e-1945.24Show/hide
Query:  LEFDGASKGNPGLAGAGAVIRANDGSAV-CRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKD
        +E DG S+GNPG AG GAV+   D S V    ++ +G ATNNVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+ ++ KL   A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVIRANDGSAV-CRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKD

Query:  KFGSFEISHIPREQNSDADALANRAI
        +F       +PR +N+ AD LAN A+
Subjt:  KFGSFEISHIPREQNSDADALANRAI

P9WLH5 Bifunctional protein Rv2228c2.9e-1945.24Show/hide
Query:  LEFDGASKGNPGLAGAGAVIRANDGSAV-CRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKD
        +E DG S+GNPG AG GAV+   D S V    ++ +G ATNNVAEYR +I GL  A+K G     V  DSKLV  Q+ G WK+K+ ++ KL   A+ L  
Subjt:  LEFDGASKGNPGLAGAGAVIRANDGSAV-CRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKD

Query:  KFGSFEISHIPREQNSDADALANRAI
        +F       +PR +N+ AD LAN A+
Subjt:  KFGSFEISHIPREQNSDADALANRAI

Q9HSF6 Ribonuclease HI5.0e-1943.9Show/hide
Query:  FDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFG
        FDGAS+GNPG A  G V+ + DG  V    + +G ATNN AEY A+I  L+ A   G   I +RGDS+LV  Q+ G W   + ++ +    A+EL   F 
Subjt:  FDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFG

Query:  SFEISHIPREQNSDADALANRAI
         + I+H+PR  N  ADALAN A+
Subjt:  SFEISHIPREQNSDADALANRAI

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein3.5e-6041.56Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        ++ +KDA++VV+KGDV G Y+ L + + Q G  +FD   ++YKG+ L K+ E+YL+S GL+   YS+ A+++  D+FG L  C  ++ +    K++E+  
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAND
         ++ + +                D  K ++          AS S  P        EK S+ + S    +    T F+EFDGASKGNPGL+GA AV++  D
Subjt:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAND

Query:  GSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRA
        GS +CR+++G+GIATNN AEY A+ILGLK+A++ G K+I+V+GDSKLVCMQ++G WK+ ++ +AKL K AK L +K  SFEISH+ R  N+DAD  AN A
Subjt:  GSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRA

Query:  IHLRDGVV
        + L +G V
Subjt:  IHLRDGVV

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.5e-6645.1Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        ME +KDA+Y+V+KGD+ G YRSL E + QAG  +  P  ++YKG+   K AE  L+S G+++A +S++A++V  D FGKL+ CP +Q S+++G+   +  
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAND
         +KR    L++   G  G+   S   KQ  I +     +P+S   +  + +                      +  +EFDGASKGNPG AGAGAV+RA+D
Subjt:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAND

Query:  GSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRA
         S +  L+EGVG ATNNVAEYRA++LGL+ AL  G K++ V GDS LVCMQVQG WK  +  MA+LCK AKEL + F +F+I HI RE+NS+AD  AN A
Subjt:  GSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRA

Query:  IHLRDG
        I L DG
Subjt:  IHLRDG

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.5e-6645.1Show/hide
Query:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP
        ME +KDA+Y+V+KGD+ G YRSL E + QAG  +  P  ++YKG+   K AE  L+S G+++A +S++A++V  D FGKL+ CP +Q S+++G+   +  
Subjt:  MEGDKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYP

Query:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAND
         +KR    L++   G  G+   S   KQ  I +     +P+S   +  + +                      +  +EFDGASKGNPG AGAGAV+RA+D
Subjt:  KAKRQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRAND

Query:  GSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRA
         S +  L+EGVG ATNNVAEYRA++LGL+ AL  G K++ V GDS LVCMQVQG WK  +  MA+LCK AKEL + F +F+I HI RE+NS+AD  AN A
Subjt:  GSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRA

Query:  IHLRDG
        I L DG
Subjt:  IHLRDG

AT5G51080.1 RNase H family protein1.6e-5238.36Show/hide
Query:  DKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAK
        +KDA++VV+KGD+ G Y+ L + + Q G  ++DP  ++YKG+ L K+ E+ L++ GL+   Y   A ++ +D+FG L  C             ++ P A 
Subjt:  DKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAK

Query:  RQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRANDGSA
                                                    S+S  K+AE    A       +T   T  +EFDGASKGNPGL+GA AV++  DGS 
Subjt:  RQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRANDGSA

Query:  VCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHL
        + ++++G+GIATNN AEY  +ILGLKHA++ G   I+V+ DSKLVCMQ++G WK+ ++ ++KL K AK+L DK  SFEISH+ R  NSDAD  AN A  L
Subjt:  VCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHL

Query:  RDGVV
         +G V
Subjt:  RDGVV

AT5G51080.2 RNase H family protein1.6e-5238.36Show/hide
Query:  DKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAK
        +KDA++VV+KGD+ G Y+ L + + Q G  ++DP  ++YKG+ L K+ E+ L++ GL+   Y   A ++ +D+FG L  C             ++ P A 
Subjt:  DKDAYYVVQKGDVFGFYRSLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAK

Query:  RQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRANDGSA
                                                    S+S  K+AE    A       +T   T  +EFDGASKGNPGL+GA AV++  DGS 
Subjt:  RQEQVLENTEYGFVGANWVSDSPKQEIIWDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRANDGSA

Query:  VCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHL
        + ++++G+GIATNN AEY  +ILGLKHA++ G   I+V+ DSKLVCMQ++G WK+ ++ ++KL K AK+L DK  SFEISH+ R  NSDAD  AN A  L
Subjt:  VCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRVRGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHL

Query:  RDGVV
         +G V
Subjt:  RDGVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAAATGAGGAATTTATTCCATTAGCTTCCACCACAAGTTTTACAGTTTTACACATTGTTCTGTCTCACACTCGCTGCCACTGCACTGCAACAAGTTTACTGATCACTCC
TTCGCCAAATTTCTGCACAATTTCTCCGCCATTGCTGCTCCTTCCACTCCTTCACAGTACGCAATCTTCTTCCTTGCCTCTATTATTTTCTTACTGTTCTCTAGGGTTCT
ATCATCTTCTAGTTCTACGCCACGATCAAGAAGCTAGAACTCCACATATGGAGGGGGATAAAGATGCCTATTACGTCGTACAGAAAGGGGATGTTTTTGGATTTTACAGG
AGTTTGAAGGAGTTGGAGACTCAAGCTGGATGTCTTATATTTGATCCTAATGCAACGATCTACAAAGGGCACCACTTATCTAAAGAAGCAGAGCAGTACCTTGCATCACG
CGGACTTCAGAGTGCCACCTACTCTATAAGTGCTGCCAATGTGACAAAGGATCTCTTCGGAAAACTACTTGCTTGCCCTGACGAGCAACTGTCTGCTACTAGAGGAAAAA
TGGCTGAAGAATACCCCAAAGCTAAGAGACAAGAACAAGTCCTTGAGAATACTGAATATGGGTTTGTAGGTGCCAACTGGGTCTCAGATTCTCCAAAGCAGGAAATTATT
TGGGATCATGGCTTTGAAGCCTTACCTGCTTCTTCGAGCTGTCAACCATCTGTTTCTAGAGGAAAAATGGCTGAAAAGTACTCTGAGGCTAAGAGATCACAGCAAGCCCA
TGAGACTGTTCAAAGTACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGAAATCCTGGGCTAGCAGGTGCTGGAGCTGTTATACGTGCCAACGATGGATCTGCGGTCT
GTAGGTTGCAAGAAGGGGTTGGGATTGCTACAAATAATGTTGCTGAATATCGCGCTGTAATTTTAGGACTGAAACATGCTCTAAAGAGTGGCATTAAACACATTCGTGTC
CGAGGAGACTCCAAGCTTGTATGTATGCAGGTTCAGGGTCTATGGAAGCTCAAAAACCAAAATATGGCTAAGTTGTGTAAAGTGGCAAAGGAGCTCAAGGATAAGTTTGG
GTCATTTGAGATCAGCCATATCCCTAGGGAACAAAATTCCGATGCCGATGCTCTAGCGAACCGTGCTATACATCTCCGAGATGGAGTTGTAGTAGAAGACTGCAAGCATA
AATGA
mRNA sequenceShow/hide mRNA sequence
GTAAATGAGGAATTTATTCCATTAGCTTCCACCACAAGTTTTACAGTTTTACACATTGTTCTGTCTCACACTCGCTGCCACTGCACTGCAACAAGTTTACTGATCACTCC
TTCGCCAAATTTCTGCACAATTTCTCCGCCATTGCTGCTCCTTCCACTCCTTCACAGTACGCAATCTTCTTCCTTGCCTCTATTATTTTCTTACTGTTCTCTAGGGTTCT
ATCATCTTCTAGTTCTACGCCACGATCAAGAAGCTAGAACTCCACATATGGAGGGGGATAAAGATGCCTATTACGTCGTACAGAAAGGGGATGTTTTTGGATTTTACAGG
AGTTTGAAGGAGTTGGAGACTCAAGCTGGATGTCTTATATTTGATCCTAATGCAACGATCTACAAAGGGCACCACTTATCTAAAGAAGCAGAGCAGTACCTTGCATCACG
CGGACTTCAGAGTGCCACCTACTCTATAAGTGCTGCCAATGTGACAAAGGATCTCTTCGGAAAACTACTTGCTTGCCCTGACGAGCAACTGTCTGCTACTAGAGGAAAAA
TGGCTGAAGAATACCCCAAAGCTAAGAGACAAGAACAAGTCCTTGAGAATACTGAATATGGGTTTGTAGGTGCCAACTGGGTCTCAGATTCTCCAAAGCAGGAAATTATT
TGGGATCATGGCTTTGAAGCCTTACCTGCTTCTTCGAGCTGTCAACCATCTGTTTCTAGAGGAAAAATGGCTGAAAAGTACTCTGAGGCTAAGAGATCACAGCAAGCCCA
TGAGACTGTTCAAAGTACCTATTTTCTTGAGTTTGATGGTGCCTCAAAGGGAAATCCTGGGCTAGCAGGTGCTGGAGCTGTTATACGTGCCAACGATGGATCTGCGGTCT
GTAGGTTGCAAGAAGGGGTTGGGATTGCTACAAATAATGTTGCTGAATATCGCGCTGTAATTTTAGGACTGAAACATGCTCTAAAGAGTGGCATTAAACACATTCGTGTC
CGAGGAGACTCCAAGCTTGTATGTATGCAGGTTCAGGGTCTATGGAAGCTCAAAAACCAAAATATGGCTAAGTTGTGTAAAGTGGCAAAGGAGCTCAAGGATAAGTTTGG
GTCATTTGAGATCAGCCATATCCCTAGGGAACAAAATTCCGATGCCGATGCTCTAGCGAACCGTGCTATACATCTCCGAGATGGAGTTGTAGTAGAAGACTGCAAGCATA
AATGAACTTCAAACATTTACAGATGGTAGGTAAGGATATCCTCTGCATTATGCTGCAAAGAGCTGCCCAGATCGACTGCCTGTTTCGTACCATTTGAATGTTGAAGATAC
CTGATTAGCATCCTTATTTTTGGTTAGTATGTTAACTAGGATGCAACTTTAGGACTTGTAAATATCAAAAGCTTGAATATTGGTATTTTGAGAGCAATGAGATGATTAAT
TTACAAAATTTAATGGTCACATCAGTTTCTATGACACTAATGAATTTAGCTA
Protein sequenceShow/hide protein sequence
VNEEFIPLASTTSFTVLHIVLSHTRCHCTATSLLITPSPNFCTISPPLLLLPLLHSTQSSSLPLLFSYCSLGFYHLLVLRHDQEARTPHMEGDKDAYYVVQKGDVFGFYR
SLKELETQAGCLIFDPNATIYKGHHLSKEAEQYLASRGLQSATYSISAANVTKDLFGKLLACPDEQLSATRGKMAEEYPKAKRQEQVLENTEYGFVGANWVSDSPKQEII
WDHGFEALPASSSCQPSVSRGKMAEKYSEAKRSQQAHETVQSTYFLEFDGASKGNPGLAGAGAVIRANDGSAVCRLQEGVGIATNNVAEYRAVILGLKHALKSGIKHIRV
RGDSKLVCMQVQGLWKLKNQNMAKLCKVAKELKDKFGSFEISHIPREQNSDADALANRAIHLRDGVVVEDCKHK