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Lsi03G014790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G014790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGibberellin-regulated protein 6-like
Genome locationchr03:25755174..25756636
RNA-Seq ExpressionLsi03G014790
SyntenyLsi03G014790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580964.1 hypothetical protein SDJN03_20966, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2750.52Show/hide
Query:  MSDNTQLFLTFFFLPIFPSLPPLLFIPNTPELPNSNPSFPISPF----FSFVFCFALP---MAMAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKH
        MSDNT+LF TFFF      LPP+LFIP   E  NS P FP S F     S  F F L    ++     + L L    F  L                   
Subjt:  MSDNTQLFLTFFFLPIFPSLPPLLFIPNTPELPNSNPSFPISPF----FSFVFCFALP---MAMAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKH

Query:  LVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSACVCLLATMETKPFALATTTGRQRKEDPNALK
              + + M +V++    THTDQGAS  SNAQI  PLGAG H+TT+HACSSAKSAAGSACVC LAT ETKP ALATTTGR RKEDPNALK
Subjt:  LVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSACVCLLATMETKPFALATTTGRQRKEDPNALK

KAG7017706.1 hypothetical protein SDJN02_19572 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-2761.76Show/hide
Query:  MAMAKFAALLILALIAFSMLQTTVMAGS--SGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGAS-NPSNAQIDVPLGAGEHSTTSHACSSAKSAA
        MAMAKFAA+L+LALIAFSMLQTTVMAG+   GR+R  +    V +   +        F        G   +  NAQI  PLGAG H+TT+HACSSAKSAA
Subjt:  MAMAKFAALLILALIAFSMLQTTVMAGS--SGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGAS-NPSNAQIDVPLGAGEHSTTSHACSSAKSAA

Query:  GSACVCLLATMETKPFALATTTGRQRKEDPNALKNP
        GSACVC LAT ETKP ALATTTGR RKEDPNALK P
Subjt:  GSACVCLLATMETKPFALATTTGRQRKEDPNALKNP

KAG7022220.1 hypothetical protein SDJN02_15950, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-1470.59Show/hide
Query:  NAQIDVPLGAGEHSTTSHACSSAKSAAGSACVCLLATMETKPFALATTTGRQRKEDPNAL-KNPPIHF
        NAQ+  PL AG HSTT+HACS AK+AA SAC C   TMETK FALATTTGRQRKE PNAL K+ P  F
Subjt:  NAQIDVPLGAGEHSTTSHACSSAKSAAGSACVCLLATMETKPFALATTTGRQRKEDPNAL-KNPPIHF

KHN13617.1 hypothetical protein glysoja_019304 [Glycine soja]1.5e-1245.6Show/hide
Query:  MAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSACV
        MAKF A +ILALIA SMLQT VMA +      +  K      +T   +  ++ FF+R + + G S  +NA  +        +TTS AC S +SAAG+ACV
Subjt:  MAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSACV

Query:  CLLATMETKPFALATTTGRQRKEDP
        C    M  K  ALATTTGR RKEDP
Subjt:  CLLATMETKPFALATTTGRQRKEDP

XP_022933447.1 uncharacterized protein LOC111440860 isoform X1 [Cucurbita moschata]1.9e-2052.11Show/hide
Query:  LPMAMAKFAALLILALIAFSMLQTTVMAGS--SGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSA
        + MAMAKFAA+LIL+LIA SM +TTVMAG+   GRNR                                     NAQ+  PL AG HSTT+HACS AK+A
Subjt:  LPMAMAKFAALLILALIAFSMLQTTVMAGS--SGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSA

Query:  AGSACVCLLATMETKPFALATTTGRQRKEDPNAL-KNPPIHF
        A SAC C   TMETK FALATTTGRQRKE PNAL K+ P  F
Subjt:  AGSACVCLLATMETKPFALATTTGRQRKEDPNAL-KNPPIHF

TrEMBL top hitse value%identityAlignment
A0A0L9U385 Uncharacterized protein1.5e-1041.22Show/hide
Query:  MAMAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSA
        MAMAKF A +ILALIA SMLQT VMA +                             +  H +   +   NA+ D    A   +TTS AC S +SAAGSA
Subjt:  MAMAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSA

Query:  CVCLLATMETKPFALATTTGRQRKEDPNALKNPPIHFAANFISFVSSF
        CV L   M  +  ALATTTGR R+EDP+AL+  P H       F++SF
Subjt:  CVCLLATMETKPFALATTTGRQRKEDPNALKNPPIHFAANFISFVSSF

A0A200QSF0 Uncharacterized protein2.3e-1142.42Show/hide
Query:  MAMAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSA
        MA  KF AL++LAL+A SML+TT +                                    T        +A  DV  GA   STTSHACSS +SAAG A
Subjt:  MAMAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSA

Query:  CVCLLATMETKPFALATTTGRQRKEDPNALKN
        CVC   +M TK  ALATTTGR RKEDP+AL++
Subjt:  CVCLLATMETKPFALATTTGRQRKEDPNALKN

A0A445FYB9 Uncharacterized protein7.8e-1238.71Show/hide
Query:  MAKFAALLILALIAFSMLQTTVMAGSSGRNRRH-------FVKHLVIVL-------------------TTHILMCIVLDFFYRTHTDQGASNPSNAQIDV
        MAKF A +ILALIA SMLQT VMA +      +        + H ++ L                   +T   +  ++ FF+R + + G S  +NA  + 
Subjt:  MAKFAALLILALIAFSMLQTTVMAGSSGRNRRH-------FVKHLVIVL-------------------TTHILMCIVLDFFYRTHTDQGASNPSNAQIDV

Query:  PLGAGEHSTTSHACSSAKSAAGSACVCLLATMETKPFALATTTGRQRKEDPNALK
               +TTS AC S +SAAG+ACVC    M  K  ALATTTGR RKEDP+AL+
Subjt:  PLGAGEHSTTSHACSSAKSAAGSACVCLLATMETKPFALATTTGRQRKEDPNALK

A0A5C7HKR3 Uncharacterized protein6.6e-1143.18Show/hide
Query:  MAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSACV
        MAK  A  +L L+A +MLQT VMA S+G    H+ +    VL    L+  V+D         G S   N +       G HSTT  A  S  +AA S CV
Subjt:  MAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSACV

Query:  CLLATMETKPFALATTTGRQRKEDPNALKNPP
        CL   M    F LATTTGR RKEDP+A +NPP
Subjt:  CLLATMETKPFALATTTGRQRKEDPNALKNPP

A0A6J1EZT1 uncharacterized protein LOC111440860 isoform X19.2e-2152.11Show/hide
Query:  LPMAMAKFAALLILALIAFSMLQTTVMAGS--SGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSA
        + MAMAKFAA+LIL+LIA SM +TTVMAG+   GRNR                                     NAQ+  PL AG HSTT+HACS AK+A
Subjt:  LPMAMAKFAALLILALIAFSMLQTTVMAGS--SGRNRRHFVKHLVIVLTTHILMCIVLDFFYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSA

Query:  AGSACVCLLATMETKPFALATTTGRQRKEDPNAL-KNPPIHF
        A SAC C   TMETK FALATTTGRQRKE PNAL K+ P  F
Subjt:  AGSACVCLLATMETKPFALATTTGRQRKEDPNAL-KNPPIHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGACAACACCCAATTATTTCTCACCTTCTTCTTCCTTCCAATCTTTCCTTCCCTTCCCCCCCTTCTATTTATACCCAACACACCAGAGCTCCCAAACTCAAATCC
CTCCTTTCCCATTTCACCCTTCTTCTCATTCGTCTTCTGTTTTGCCCTTCCAATGGCGATGGCTAAGTTCGCTGCTCTCTTGATTCTGGCCCTCATTGCCTTTTCCATGC
TTCAGACCACTGTCATGGCCGGCAGTAGTGGTCGAAACAGGCGGCATTTTGTCAAGCACCTTGTAATTGTACTCACTACTCACATTTTGATGTGCATTGTTCTTGACTTT
TTTTACAGAACCCATACGGACCAGGGAGCGTCAAATCCTTCCAATGCCCAAATCGATGTGCCACTCGGTGCGGGAGAACACAGTACCACAAGCCATGCATGTTCTTCTGC
CAAAAGTGCTGCAGGAAGTGCTTGTGTGTGCCTCCTGGCTACTATGGAAACAAAGCCGTTTGCCCTTGCTACAACAACTGGAAGACAAAGGAAGGAGGACCCAAATGCCC
TTAAAAATCCCCCAATTCATTTTGCTGCTAACTTCATCTCTTTTGTGTCCTCTTTTAAGAAAATGGGGGCTCTGTTATGTTTTTTTTGTTATGAACTTCTATTGGAGATT
GGAAGAAAAAAGAAAGAAGAGAGAAGAAATTTGTAA
mRNA sequenceShow/hide mRNA sequence
TGTCACTCCCAATCGCAACTCAAAAGCATATGAGCGACAACACCCAATTATTTCTCACCTTCTTCTTCCTTCCAATCTTTCCTTCCCTTCCCCCCCTTCTATTTATACCC
AACACACCAGAGCTCCCAAACTCAAATCCCTCCTTTCCCATTTCACCCTTCTTCTCATTCGTCTTCTGTTTTGCCCTTCCAATGGCGATGGCTAAGTTCGCTGCTCTCTT
GATTCTGGCCCTCATTGCCTTTTCCATGCTTCAGACCACTGTCATGGCCGGCAGTAGTGGTCGAAACAGGCGGCATTTTGTCAAGCACCTTGTAATTGTACTCACTACTC
ACATTTTGATGTGCATTGTTCTTGACTTTTTTTACAGAACCCATACGGACCAGGGAGCGTCAAATCCTTCCAATGCCCAAATCGATGTGCCACTCGGTGCGGGAGAACAC
AGTACCACAAGCCATGCATGTTCTTCTGCCAAAAGTGCTGCAGGAAGTGCTTGTGTGTGCCTCCTGGCTACTATGGAAACAAAGCCGTTTGCCCTTGCTACAACAACTGG
AAGACAAAGGAAGGAGGACCCAAATGCCCTTAAAAATCCCCCAATTCATTTTGCTGCTAACTTCATCTCTTTTGTGTCCTCTTTTAAGAAAATGGGGGCTCTGTTATGTT
TTTTTTGTTATGAACTTCTATTGGAGATTGGAAGAAAAAAGAAAGAAGAGAGAAGAAATTTGTAACTCATTAGATGGGAAGAAATATTGGGTTTACTTATTTATAAGTTA
ATATTAATTAATATATGAGCAATGAATGAAACATCTTGTTTCTATTAAGATA
Protein sequenceShow/hide protein sequence
MSDNTQLFLTFFFLPIFPSLPPLLFIPNTPELPNSNPSFPISPFFSFVFCFALPMAMAKFAALLILALIAFSMLQTTVMAGSSGRNRRHFVKHLVIVLTTHILMCIVLDF
FYRTHTDQGASNPSNAQIDVPLGAGEHSTTSHACSSAKSAAGSACVCLLATMETKPFALATTTGRQRKEDPNALKNPPIHFAANFISFVSSFKKMGALLCFFCYELLLEI
GRKKKEERRNL