; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G014980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G014980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:25986152..25987008
RNA-Seq ExpressionLsi03G014980
SyntenyLsi03G014980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588364.1 hypothetical protein SDJN03_16929, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2373.49Show/hide
Query:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGR--KSRMMMMETMDYSDPEPNTNIK-GGYVSPPPP
        MGRS FLSILLLSL+I+ CF+NGFG  +RM+E VD+HHGS + L+ESG   + RMMMMETMDYSDPEPNTN+K GGYVSPPPP
Subjt:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGR--KSRMMMMETMDYSDPEPNTNIK-GGYVSPPPP

KAG6659311.1 hypothetical protein CIPAW_03G025300 [Carya illinoinensis]2.2e-1156.25Show/hide
Query:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP
        MGRS FLSILL S ++ LCFS+GFGR  +++ETV+ H  S   +EES       M+E MDYSDP PNTN K GY+  PPP
Subjt:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP

XP_011652234.1 uncharacterized protein LOC105435001 [Cucumis sativus]2.4e-2983.72Show/hide
Query:  MGRSSFLSI-LLLSLVISLCFSNGFGRNLRM-VETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPPPNRG
        MGRSSFLSI LLLS +I+LCFSNGFGRNLRM VE +DSHH SR+LLEESGRK RMM METMDY+DPEPNTN+KGGYVSPPPPPN G
Subjt:  MGRSSFLSI-LLLSLVISLCFSNGFGRNLRM-VETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPPPNRG

XP_041004487.1 uncharacterized protein LOC121249761 isoform X1 [Juglans microcarpa x Juglans regia]3.2e-1054.32Show/hide
Query:  MGRSSFLSILLLSLVISLCFSN-GFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP
        MGRS FL+ILL+S ++ LCFS+ GFGR  +++ETV+ H  S   +EES      MM+E MDYSDP PNTN + GY+  PPP
Subjt:  MGRSSFLSILLLSLVISLCFSN-GFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP

XP_041004488.1 uncharacterized protein LOC121249761 isoform X2 [Juglans microcarpa x Juglans regia]1.3e-1155Show/hide
Query:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP
        MGRS FL+ILL+S ++ LCFS+GFGR  +++ETV+ H  S   +EES      MM+E MDYSDP PNTN + GY+  PPP
Subjt:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP

TrEMBL top hitse value%identityAlignment
A0A0A0LCS0 Uncharacterized protein1.2e-2983.72Show/hide
Query:  MGRSSFLSI-LLLSLVISLCFSNGFGRNLRM-VETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPPPNRG
        MGRSSFLSI LLLS +I+LCFSNGFGRNLRM VE +DSHH SR+LLEESGRK RMM METMDY+DPEPNTN+KGGYVSPPPPPN G
Subjt:  MGRSSFLSI-LLLSLVISLCFSNGFGRNLRM-VETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPPPNRG

A0A200QHE3 Uncharacterized protein5.9e-1053.75Show/hide
Query:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP
        MGRS FL  LL S V++LC S GFGR L  +E  D    S +LLEE+  K+R  M+E MDY+DPE NTN + GY+  PPP
Subjt:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP

A0A2N9EQS6 Uncharacterized protein2.9e-0952.5Show/hide
Query:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP
        MGRS FL ILL+S ++ L FS+GFGR  +++ETV+    S +  EE+  KSR  ++E MDYSDP PNTN + GY+  PPP
Subjt:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP

A0A2N9I673 Uncharacterized protein2.9e-0952.5Show/hide
Query:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP
        MGRS FL ILL+S ++ L FS+GFGR  +++ETV+    S +  EE+  KSR  ++E MDYSDP PNTN + GY+  PPP
Subjt:  MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPP

A0A2P5CWE3 Uncharacterized protein3.8e-0947.62Show/hide
Query:  MGRSSFLSILLLSLVISLCFSNGFG-RNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPPPNR
        MGR  F +ILL+SL + L FS+GFG R+L+ VE     H S + ++E+G      M+E  DYS+PEPNTN + GY+  PPP +R
Subjt:  MGRSSFLSILLLSLVISLCFSNGFG-RNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPPPNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G15265.1 unknown protein6.3e-0437.8Show/hide
Query:  MGRSSFLSILLL-SLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESG--RKSRMMMMETMDYSDPEPNTNIKGGYVSPPP
        MG+S F   LL+ SL++ + FS   GR+LR  +    +  + L     G  RK+    ME MDY     NTN  G   SPPP
Subjt:  MGRSSFLSILLL-SLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESG--RKSRMMMMETMDYSDPEPNTNIKGGYVSPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGCTCTTCTTTTCTCTCAATTCTTCTTCTTTCTCTCGTTATCTCTCTCTGTTTCTCTAATGGATTTGGAAGGAATTTGAGGATGGTGGAGACTGTTGATTCACA
TCATGGCTCCAGACTTCTGCTAGAGGAAAGTGGAAGAAAATCAAGGATGATGATGATGGAGACTATGGATTATTCAGATCCAGAACCAAATACCAACATAAAAGGTGGCT
ATGTTTCTCCACCTCCTCCTCCAAATCGTGGATGA
mRNA sequenceShow/hide mRNA sequence
TATATATACAAAAAAAAAAACTCAGAAGAAGAGAGAGATTAAAAAAAAAAAAAAGAAAGAAAGAAAAATTCAAAGAAAAAGCTGTTATGATCTATGTTCACAGTTCACTC
ACATGAAAGATGAAACAAATCTAAACAGGATCTCTACAACCCCATTTTTACAGCCTTTCATTTCTCCTTTCAGTTTGGTTTTCGTTCAATTGCTACTTTCCTTTTTCTTT
TTTTCTTTTTGAAAATATACAGAGAAACAGAGAAAAAAAAAAAAAAAACTCAAACTTCTTCTCGTAATTACTCATCACTTACTCATTCATTCATAAATCTGAAAACAACC
CATTTCTCAAAATCCTCTTCACAATAATGGGTCGCTCTTCTTTTCTCTCAATTCTTCTTCTTTCTCTCGTTATCTCTCTCTGTTTCTCTAATGGATTTGGAAGGAATTTG
AGGATGGTGGAGACTGTTGATTCACATCATGGCTCCAGACTTCTGCTAGAGGAAAGTGGAAGAAAATCAAGGATGATGATGATGGAGACTATGGATTATTCAGATCCAGA
ACCAAATACCAACATAAAAGGTGGCTATGTTTCTCCACCTCCTCCTCCAAATCGTGGATGAATTTTAATTCAATTCTCAAGAAATCAATAAGGGC
Protein sequenceShow/hide protein sequence
MGRSSFLSILLLSLVISLCFSNGFGRNLRMVETVDSHHGSRLLLEESGRKSRMMMMETMDYSDPEPNTNIKGGYVSPPPPPNRG