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Lsi03G015170 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G015170
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:26181619..26190645
RNA-Seq ExpressionLsi03G015170
SyntenyLsi03G015170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651208.1 hypothetical protein Csa_001569 [Cucumis sativus]1.8e-1946.31Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHTGEILKHLEKQ EFLMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
                  VEEEMLMRKFYEIMSAHGL KK+EDDRN SGS RNGDNN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
XP_008443366.1 PREDICTED: uncharacterized protein LOC103486972 isoform X2 [Cucumis melo]8.9e-1945.64Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHT EILKHLEKQDEFLMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
                  VEEEMLMRKFYEIMSAHGL KK+E+DRN SGS RNGDNN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
XP_022934797.1 uncharacterized protein LOC111441864 [Cucurbita moschata]1.6e-1542.76Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHTGE+LKHLEKQDE LMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRN
                  VEEEMLMRKFYEIMSAHGLTKKSED R+  G  RN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRN
XP_031739188.1 uncharacterized protein LOC116402896 [Cucumis sativus]1.8e-1946.31Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHTGEILKHLEKQ EFLMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
                  VEEEMLMRKFYEIMSAHGL KK+EDDRN SGS RNGDNN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
XP_038903424.1 uncharacterized protein LOC120090017 [Benincasa hispida]1.6e-2047.65Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
                  VEEEMLMRKFYEIMSAHGLTKK EDD N SGSVRNGDNN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
TrEMBL top hitse value%identityAlignment
A0A0A0LF72 Uncharacterized protein8.6e-2046.31Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHTGEILKHLEKQ EFLMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
                  VEEEMLMRKFYEIMSAHGL KK+EDDRN SGS RNGDNN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
A0A1S3B7U3 uncharacterized protein LOC103486972 isoform X24.3e-1945.64Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHT EILKHLEKQDEFLMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
                  VEEEMLMRKFYEIMSAHGL KK+E+DRN SGS RNGDNN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNN
A0A5D3DQL0 Uncharacterized protein3.0e-1241.48Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHT EILKHLEKQDEFLMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSED
                  VEEEMLMRKFYEIMSAHGL KK  D
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSED
A0A6J1F3T3 uncharacterized protein LOC1114418647.6e-1642.76Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHTGE+LKHLEKQDE LMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRN
                  VEEEMLMRKFYEIMSAHGLTKKSED R+  G  RN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRN
A0A6J1J8Z6 uncharacterized protein LOC1114823681.4e-1441.38Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR
        MDPKHTGE+LKHLEKQDE LMDAYRSMSHELHKLQ                                                                 
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSR

Query:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRN
                  VEEEMLMRKFYEIMSAHGLTKKSED  +     RN
Subjt:  PGLSWRNQALVEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G37608.1 unknown protein7.0e-0656.76Show/hide
Query:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVE
        M+P+HT ++LKHLEKQ E L +A ++M  EL KL+VE
Subjt:  MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCCAAGCACACAGGAGAGATTTTGAAGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCTCATGAACTACATAAACTTCAGGTTGA
ATCACCCGATCATCTGAAAAACGACTGTGGGGCAATCCCTTTGCAAGGGATGATATTGCTCTCTGAGTTTCATCCGTCGCATTTCTCTGCTCCTCCAGATTGTGGAACAA
AACACCCATATTCTTCTGTTGTTCCTCAACGATTTTCCTTTGGGTGTCCATCTGTTGCAAAATTTTATTCACGTTCTCGACCAGGTCTCTCATGGAGGAATCAAGCCCTG
GTAGAAGAAGAAATGCTCATGCGCAAATTTTATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGATCGTAATATTTCTGGCAGCGTAAGGAATGGTGA
TAACAACACCTAA
mRNA sequenceShow/hide mRNA sequence
GTTTAAACCGACCTCTCCACTTCTTTGCTCCTCCATCGTCGCTCTCCCTCAATATCGCCATCGCCGCCGTGGAGCGCCTGCCAGATTTGAGAAGCCAACCTGTTCACAGG
CGACATATCACTGATATAGGGGGTTTTAAAAAAAATTGAAATCTTAGTTTTGGAACCTCTTGAAGTCTAAAGCTTTAGGAATGGACCCCAAGCACACAGGAGAGATTTTG
AAGCATTTGGAGAAGCAGGATGAGTTTCTTATGGATGCTTATAGATCAATGTCTCATGAACTACATAAACTTCAGGTTGAATCACCCGATCATCTGAAAAACGACTGTGG
GGCAATCCCTTTGCAAGGGATGATATTGCTCTCTGAGTTTCATCCGTCGCATTTCTCTGCTCCTCCAGATTGTGGAACAAAACACCCATATTCTTCTGTTGTTCCTCAAC
GATTTTCCTTTGGGTGTCCATCTGTTGCAAAATTTTATTCACGTTCTCGACCAGGTCTCTCATGGAGGAATCAAGCCCTGGTAGAAGAAGAAATGCTCATGCGCAAATTT
TATGAAATAATGTCAGCTCATGGTCTAACAAAGAAGAGTGAAGATGATCGTAATATTTCTGGCAGCGTAAGGAATGGTGATAACAACACCTAAGACTGACACCAAATTGA
ACTAAAAGGTAAAATTACCACAGCCACTCGGTCCACTGGAAAAGGAAAGTCCCAATGTGATTCACATGTTTTTTACATTTTTTTTTTCCATAGTATAAATGAAACATTTT
CTTCAATTACAGAAAATAAAAGGGAAAAAAATTGCTTATTTAAGTCGTAAATTATTATAACATATATCAACAATTGTAAACCAAATATACATATTGATACAATAATAATG
AATAGATAGTATTGGATATC
Protein sequenceShow/hide protein sequence
MDPKHTGEILKHLEKQDEFLMDAYRSMSHELHKLQVESPDHLKNDCGAIPLQGMILLSEFHPSHFSAPPDCGTKHPYSSVVPQRFSFGCPSVAKFYSRSRPGLSWRNQAL
VEEEMLMRKFYEIMSAHGLTKKSEDDRNISGSVRNGDNNT