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Lsi03G015250 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G015250
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPhytocyanin domain-containing protein
Genome locationchr03:26258571..26260546
RNA-Seq ExpressionLsi03G015250
SyntenyLsi03G015250
Gene Ontology termsGO:0006306 - DNA methylation (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin
IPR039391 - Phytocyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053800.1 lamin-like protein [Cucumis melo var. makuwa]1.2e-3576.24Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNG---VFLTNYPTFCCSILNALLLFVAIF
        + +NKRS+E+CNDKDFIKNITRGGRDVFQL+E  PYFFIGGGGYCFQG+KL + VS VD APAPSPAA +K+G    FL+N PTFCCS+LNALLLFVAIF
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNG---VFLTNYPTFCCSILNALLLFVAIF

Query:  L
        L
Subjt:  L

KGN59686.2 hypothetical protein Csa_001715 [Cucumis sativus]2.5e-3374.76Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVD-PAPAPSPAAPSKN-GVFLTNYPTFCCSILNALLLFVAI-F
        + +NKRSFE+CN+KDFIKNITRGGRDVFQL E  PYFFIGGGGYCFQG+KL + +S VD  APAPSPA  +K+ G FL+N PT CCSILNALLLFVAI F
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVD-PAPAPSPAAPSKN-GVFLTNYPTFCCSILNALLLFVAI-F

Query:  LGG
        LGG
Subjt:  LGG

XP_004136681.1 lamin-like protein [Cucumis sativus]2.5e-3374.76Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVD-PAPAPSPAAPSKN-GVFLTNYPTFCCSILNALLLFVAI-F
        + +NKRSFE+CN+KDFIKNITRGGRDVFQL E  PYFFIGGGGYCFQG+KL + +S VD  APAPSPA  +K+ G FL+N PT CCSILNALLLFVAI F
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVD-PAPAPSPAAPSKN-GVFLTNYPTFCCSILNALLLFVAI-F

Query:  LGG
        LGG
Subjt:  LGG

XP_008443357.1 PREDICTED: lamin-like protein [Cucumis melo]1.2e-3576.24Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNG---VFLTNYPTFCCSILNALLLFVAIF
        + +NKRS+E+CNDKDFIKNITRGGRDVFQL+E  PYFFIGGGGYCFQG+KL + VS VD APAPSPAA +K+G    FL+N PTFCCS+LNALLLFVAIF
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNG---VFLTNYPTFCCSILNALLLFVAIF

Query:  L
        L
Subjt:  L

XP_022926318.1 lamin-like protein [Cucurbita moschata]4.7e-2462.24Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSILNALLLFVAIFL
        + +NK S+E+CN+K+FIKNITRGGRDVFQL E RPYFFI GGGYCFQG+KL ++V     APA  P+A   +G  L+N PT  C I+NAL+LFVA+FL
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSILNALLLFVAIFL

TrEMBL top hitse value%identityAlignment
A0A0A0LF66 Phytocyanin domain-containing protein1.2e-3374.76Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVD-PAPAPSPAAPSKN-GVFLTNYPTFCCSILNALLLFVAI-F
        + +NKRSFE+CN+KDFIKNITRGGRDVFQL E  PYFFIGGGGYCFQG+KL + +S VD  APAPSPA  +K+ G FL+N PT CCSILNALLLFVAI F
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVD-PAPAPSPAAPSKN-GVFLTNYPTFCCSILNALLLFVAI-F

Query:  LGG
        LGG
Subjt:  LGG

A0A1S3B8J9 lamin-like protein5.7e-3676.24Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNG---VFLTNYPTFCCSILNALLLFVAIF
        + +NKRS+E+CNDKDFIKNITRGGRDVFQL+E  PYFFIGGGGYCFQG+KL + VS VD APAPSPAA +K+G    FL+N PTFCCS+LNALLLFVAIF
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNG---VFLTNYPTFCCSILNALLLFVAIF

Query:  L
        L
Subjt:  L

A0A5A7UEY9 Lamin-like protein5.7e-3676.24Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNG---VFLTNYPTFCCSILNALLLFVAIF
        + +NKRS+E+CNDKDFIKNITRGGRDVFQL+E  PYFFIGGGGYCFQG+KL + VS VD APAPSPAA +K+G    FL+N PTFCCS+LNALLLFVAIF
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNG---VFLTNYPTFCCSILNALLLFVAIF

Query:  L
        L
Subjt:  L

A0A6J1EHP8 lamin-like protein2.3e-2462.24Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSILNALLLFVAIFL
        + +NK S+E+CN+K+FIKNITRGGRDVFQL E RPYFFI GGGYCFQG+KL ++V     APA  P+A   +G  L+N PT  C I+NAL+LFVA+FL
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSILNALLLFVAIFL

A0A6J1I2W1 lamin-like protein2.1e-2260.2Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSILNALLLFVAIFL
        + +N+ S+E C +K+FIKNITRGGRDVFQL E RPYFFI GGGYCFQG+KL ++V     APA  P+A   +   L+N PT  C I+NALLLFVA+FL
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSILNALLLFVAIFL

SwissProt top hitse value%identityAlignment
Q39131 Lamin-like protein6.0e-0636.99Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKN
        + +NK  +E C     I+N TRG GRD+  L +++ Y+ + G G C+ G+KL++    V+  P P  +AP KN
Subjt:  MAMNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKN

Arabidopsis top hitse value%identityAlignment
AT2G27035.1 early nodulin-like protein 208.5e-1645.45Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSIL--NALLLFVAIF
        + +NK S+E C D D+I NITRGGRDVFQL E +PY+FI G GYC +G+KL I V      P P P+AP       TN+ +    ++  NA+   + IF
Subjt:  MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSIL--NALLLFVAIF

AT3G01070.1 early nodulin-like protein 163.2e-0736.08Show/hide
Query:  MNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFI-GGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLT-NYPTFCCSILNALLLFVAI
        +N+ ++ +CN  + I N +RG GRD+  L  +R Y+ I G GG C+ G+KL ++V    P PA   AAP+KN    T +   F    L  + +F A+
Subjt:  MNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFI-GGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLT-NYPTFCCSILNALLLFVAI

AT4G12880.1 early nodulin-like protein 194.5e-0938.89Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSK
        + +NK  +E C     I+N TRG GRD+  L E+R Y+ + G G C QG+KL ++V    P P  +P  P++
Subjt:  MAMNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSK

AT4G12880.2 early nodulin-like protein 194.5e-0938.89Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSK
        + +NK  +E C     I+N TRG GRD+  L E+R Y+ + G G C QG+KL ++V    P P  +P  P++
Subjt:  MAMNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSK

AT5G15350.1 early nodulin-like protein 174.2e-0736.99Show/hide
Query:  MAMNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKN
        + +NK  +E C     I+N TRG GRD+  L +++ Y+ + G G C+ G+KL++    V+  P P  +AP KN
Subjt:  MAMNKRSFENCNDKDFIKNITRG-GRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGAACAAAAGGAGCTTTGAGAATTGCAACGACAAGGACTTCATAAAAAACATTACAAGAGGTGGACGAGATGTTTTTCAGTTGGCGGAGTCGCGGCCATATTT
CTTCATCGGAGGCGGTGGCTACTGCTTCCAAGGAATAAAACTCACCATCATCGTGTCGGTGGTTGACCCCGCGCCAGCTCCGTCGCCTGCAGCCCCTAGCAAAAATGGCG
TCTTCCTAACAAATTATCCCACTTTTTGTTGTTCAATTTTGAATGCCCTTTTGCTTTTTGTAGCCATTTTTCTTGGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGAACAAAAGGAGCTTTGAGAATTGCAACGACAAGGACTTCATAAAAAACATTACAAGAGGTGGACGAGATGTTTTTCAGTTGGCGGAGTCGCGGCCATATTT
CTTCATCGGAGGCGGTGGCTACTGCTTCCAAGGAATAAAACTCACCATCATCGTGTCGGTGGTTGACCCCGCGCCAGCTCCGTCGCCTGCAGCCCCTAGCAAAAATGGCG
TCTTCCTAACAAATTATCCCACTTTTTGTTGTTCAATTTTGAATGCCCTTTTGCTTTTTGTAGCCATTTTTCTTGGTGGTTAA
Protein sequenceShow/hide protein sequence
MAMNKRSFENCNDKDFIKNITRGGRDVFQLAESRPYFFIGGGGYCFQGIKLTIIVSVVDPAPAPSPAAPSKNGVFLTNYPTFCCSILNALLLFVAIFLGG