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Lsi03G015710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G015710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiondisease resistance protein RGA2-like
Genome locationchr03:26698771..26699217
RNA-Seq ExpressionLsi03G015710
SyntenyLsi03G015710
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR036388 - Winged helix-like DNA-binding domain superfamily
IPR044974 - Disease resistance protein, plants


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651192.1 hypothetical protein Csa_002145 [Cucumis sativus]1.9e-2956.52Show/hide
Query:  GGAVKFEEQDF-EENHE-SWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERE-NLTMED
        GGAVKFEE +  EE+HE SW+TKVES+ RNIS+EDKD+                             DY F K  LI+MWIAQGFIQP Q R+ NL MED
Subjt:  GGAVKFEEQDF-EENHE-SWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERE-NLTMED

Query:  IGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI
        IGE+YFNFLLSRS+FQD+ ++ N RIVGFK+HDL+HDI
Subjt:  IGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI

XP_004136783.2 disease resistance protein RGA2 [Cucumis sativus]1.9e-2956.52Show/hide
Query:  GGAVKFEEQDF-EENHE-SWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERE-NLTMED
        GGAVKFEE +  EE+HE SW+TKVES+ RNIS+EDKD+                             DY F K  LI+MWIAQGFIQP Q R+ NL MED
Subjt:  GGAVKFEEQDF-EENHE-SWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERE-NLTMED

Query:  IGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI
        IGE+YFNFLLSRS+FQD+ ++ N RIVGFK+HDL+HDI
Subjt:  IGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI

XP_038877687.1 putative disease resistance protein RGA1 [Benincasa hispida]1.1e-3259.56Show/hide
Query:  GGAVKFEEQDFEE-NHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIG
        GGAVKFEE DFE+ ++ESWITKVES+A+NI  ED+D+                             DY F K +LIQMWIAQGFIQ QQERENL MEDIG
Subjt:  GGAVKFEEQDFEE-NHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIG

Query:  EEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI
        EEYFNFLLSRSLFQD+ ++EN RI+ FK+HDL+HDI
Subjt:  EEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI

XP_038877689.1 putative disease resistance protein RGA3 [Benincasa hispida]1.3e-3055.71Show/hide
Query:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE
        GGA+KFE     +++E W+TKVES+ RNI  ED+ +                             DY F K +LIQMWIAQGFIQPQ+ERENL MEDIGE
Subjt:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE

Query:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
        EYFNFLLSRSLFQD+ K+ENGRIV FK+HDLIHDI  + S
Subjt:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS

XP_038903552.1 putative disease resistance protein RGA3 [Benincasa hispida]4.8e-3360.74Show/hide
Query:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE
        GGAV FEE DF  ++E+W+TKVES+ARNIS EDKD+                             DY F K +LI+MWIAQGFIQPQ ERENL MEDIGE
Subjt:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE

Query:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI
        EYFN+LLSRSLFQD  KN NGRIV FK+HDLIHDI
Subjt:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI

TrEMBL top hitse value%identityAlignment
A0A0A0KST5 Uncharacterized protein1.3e-2857.04Show/hide
Query:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE
        GGAVKFE    E   ESW+ K+ES ARNISIEDKD+                             DY+F K + IQMWIA+GFIQP+QERENLTME+IGE
Subjt:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE

Query:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI
        EY NFLLSRSLF+D  K + GRIV FKIHDL+HDI
Subjt:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI

A0A0A0LBV0 Uncharacterized protein9.1e-3056.52Show/hide
Query:  GGAVKFEEQDF-EENHE-SWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERE-NLTMED
        GGAVKFEE +  EE+HE SW+TKVES+ RNIS+EDKD+                             DY F K  LI+MWIAQGFIQP Q R+ NL MED
Subjt:  GGAVKFEEQDF-EENHE-SWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERE-NLTMED

Query:  IGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI
        IGE+YFNFLLSRS+FQD+ ++ N RIVGFK+HDL+HDI
Subjt:  IGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI

A0A6J1CUL8 putative disease resistance protein RGA48.5e-2044.29Show/hide
Query:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE
        GG  K     FE N+E W+T VES+ RNI  ++KD+                             D +F K  LIQMWIAQGFIQ ++    +  E+IGE
Subjt:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE

Query:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
         YFNFLLSRSLFQD+ K+ +G I  FK+HDLIHD+  I S
Subjt:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS

A0A6J1CVR3 putative disease resistance protein RGA34.4e-2450Show/hide
Query:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE
        GGA K     FE N+E W+T VES+ RNIS +DKD+                             D++F K  LIQMWIAQGFIQ  QE +++T+E+IGE
Subjt:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE

Query:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
        EYFNFL SRSLFQDI K+ NG I  FK+HDLIHD+  I S
Subjt:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS

A0A6J1CVR6 putative disease resistance protein RGA31.7e-2045.93Show/hide
Query:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE
        GGA+K     FE ++E+W+ KV+S+ RNIS +DKD+                             D  F K  LIQMWIAQGFIQ  +     T EDIGE
Subjt:  GGAVKFEEQDFEENHESWITKVESMARNISIEDKDY-----------------------------DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGE

Query:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI
         + NFLLSRSLFQD+ K+ N R+  FK+HDLIHDI
Subjt:  EYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI

SwissProt top hitse value%identityAlignment
P0DO07 Disease resistance protein Pik-22.7e-0733.78Show/hide
Query:  YKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
        +K  + +L + WIA+GF     E++ LT E + E YFN L  R+L + ++   NG++  F++HD++ + +  KS
Subjt:  YKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS

Q2QZF1 Disease resistance protein PIK6-NP4.2e-0833.78Show/hide
Query:  YKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
        +K  + +L + WIA+GF     E++ LT E++ E YFN L  R+L + ++   NG++  F++HD++ + +  KS
Subjt:  YKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS

Q7XA39 Putative disease resistance protein RGA49.4e-0843.06Show/hide
Query:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVS
        D K  K  LI +W+A GF+     + NL +ED+G E +N L  RS FQ+I+         FKIHDLIHD+ +
Subjt:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVS

Q7XA42 Putative disease resistance protein RGA11.6e-0744.44Show/hide
Query:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVS
        D K  K  LI  W+A GF+     + NL +ED+G E +N L  RS FQ+I+  E+G+   FK+HDLIHD+ +
Subjt:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVS

Q7XBQ9 Disease resistance protein RGA21.2e-0740.28Show/hide
Query:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVS
        D K  K KLI +W+A GF+     + N+ +ED+G+E +  L  RS FQ+I+  +      FK+HDLIHD+ +
Subjt:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVS

Arabidopsis top hitse value%identityAlignment
AT3G07040.1 NB-ARC domain-containing disease resistance protein4.8e-0735.71Show/hide
Query:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI
        +Y+  + +LI+MW+AQ F++P +    +  E++ + Y N L+ R++ Q I  N  GR   FK+HD+I +I
Subjt:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDI

AT3G14470.1 NB-ARC domain-containing disease resistance protein5.3e-0633.78Show/hide
Query:  YKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
        + F K K++ +W+A+GF+  QQ R +  +E++G EYF+ L SRSL Q  +         + +HD I+++    S
Subjt:  YKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS

AT3G46530.1 NB-ARC domain-containing disease resistance protein3.3e-0837.33Show/hide
Query:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
        DY+    KLI + +A+GFIQ  +E   + MED+   Y   L+ RSL + +++ E G+++  +IHDL+ D+   KS
Subjt:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS

AT3G46710.1 NB-ARC domain-containing disease resistance protein3.3e-0840Show/hide
Query:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
        DY+    KLIQ+ +A+GFI   QE E +TMED+   Y   L+  SL  ++ K + G+++ F+IHDL+ +    KS
Subjt:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS

AT3G46730.1 NB-ARC domain-containing disease resistance protein2.8e-0737.33Show/hide
Query:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS
        DY+    KLI + +A+GFI   QE E + MED+   Y + L+ RSL +  ++ E G+++  +IHDL+ D+   K+
Subjt:  DYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVSIKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGAGGGGCTGTCAAGTTTGAAGAACAAGATTTTGAAGAAAATCATGAGAGTTGGATAACAAAAGTTGAAAGCATGGCAAGAAACATTTCAATAGAGGACAAAGA
TTATGATTATAAATTTCATAAAGTTAAACTAATTCAAATGTGGATAGCACAAGGATTTATTCAACCCCAACAAGAAAGAGAGAACTTGACAATGGAGGATATAGGAGAAG
AGTACTTCAACTTCTTATTGTCTCGTTCCTTATTTCAAGATATTCAAAAGAATGAGAATGGAAGAATTGTTGGGTTTAAGATACATGATCTAATACATGATATTGTTTCA
ATCAAATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGAGGGGCTGTCAAGTTTGAAGAACAAGATTTTGAAGAAAATCATGAGAGTTGGATAACAAAAGTTGAAAGCATGGCAAGAAACATTTCAATAGAGGACAAAGA
TTATGATTATAAATTTCATAAAGTTAAACTAATTCAAATGTGGATAGCACAAGGATTTATTCAACCCCAACAAGAAAGAGAGAACTTGACAATGGAGGATATAGGAGAAG
AGTACTTCAACTTCTTATTGTCTCGTTCCTTATTTCAAGATATTCAAAAGAATGAGAATGGAAGAATTGTTGGGTTTAAGATACATGATCTAATACATGATATTGTTTCA
ATCAAATCCTAA
Protein sequenceShow/hide protein sequence
MGGGAVKFEEQDFEENHESWITKVESMARNISIEDKDYDYKFHKVKLIQMWIAQGFIQPQQERENLTMEDIGEEYFNFLLSRSLFQDIQKNENGRIVGFKIHDLIHDIVS
IKS