| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0053863.1 DNA-directed RNA polymerase V subunit 5A [Cucumis melo var. makuwa] | 2.7e-98 | 72.3 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EP+ VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYTINS DIDLSLQQFR+I+GQ PDVDRLKL A H SDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
VLV+FCGTGAVKVNAIRNIAGQIANKD+LHGLILIVQNQITNQAMKAVELFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTS+
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| XP_004136650.1 DNA-directed RNA polymerase V subunit 5A [Cucumis sativus] | 4.0e-97 | 72.1 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EP+ VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYTINS +ID SLQQFRE +GQ PDVDRLKLSA H SDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
VLV+FCGTGAVKVNAIRNIAGQIANKD+LHGLILIVQNQITNQAMKAVELFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
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| XP_008443287.1 PREDICTED: DNA-directed RNA polymerase V subunit 5A [Cucumis melo] | 2.7e-98 | 72.3 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EP+ VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYTINS DIDLSLQQFR+I+GQ PDVDRLKL A H SDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
VLV+FCGTGAVKVNAIRNIAGQIANKD+LHGLILIVQNQITNQAMKAVELFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTS+
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| XP_022158561.1 DNA-directed RNA polymerase V subunit 5A [Momordica charantia] | 7.2e-99 | 72.66 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEP++VE GTCLSSYIDNG+TESHRYFL RRTVLEMLRDRGYT +SD DL+LQQFREIYGQSPDVDRLKLSAVHRSDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
+LVIFCGTG+VKVNAIRNIAGQI NKDTLHGLILIVQNQITNQAMKAV+LFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT S
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| XP_038903402.1 DNA-directed RNA polymerase V subunit 5A [Benincasa hispida] | 6.3e-103 | 75.18 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEP++VEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYT+NSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
VLVIFCGTGAVKVNAIRNIAGQIANKD+LHGLILIVQNQITNQAMKAVELFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
FKVEIFQITDLLVNITKH LKPNHQVL+EEEKQKLL+QYSIEEKQLPRMLR DA+ARYYGLEKGQVVKVTYDGDMT S
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCG9 Uncharacterized protein | 1.9e-97 | 72.1 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EP+ VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYTINS +ID SLQQFRE +GQ PDVDRLKLSA H SDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
VLV+FCGTGAVKVNAIRNIAGQIANKD+LHGLILIVQNQITNQAMKAVELFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT
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| A0A1S3B7M5 DNA-directed RNA polymerase V subunit 5A | 1.3e-98 | 72.3 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EP+ VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYTINS DIDLSLQQFR+I+GQ PDVDRLKL A H SDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
VLV+FCGTGAVKVNAIRNIAGQIANKD+LHGLILIVQNQITNQAMKAVELFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTS+
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| A0A5D3DQJ3 DNA-directed RNA polymerase V subunit 5A | 1.3e-98 | 72.3 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFE EP+ VEFGTCLSSYID+GTTESHRYFLSRRTV+EML+DRGYTINS DIDLSLQQFR+I+GQ PDVDRLKL A H SDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
VLV+FCGTGAVKVNAIRNIAGQIANKD+LHGLILIVQNQITNQAMKAVELFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTS+
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| A0A6J1E191 DNA-directed RNA polymerase V subunit 5A | 3.5e-99 | 72.66 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGFEGEP++VE GTCLSSYIDNG+TESHRYFL RRTVLEMLRDRGYT +SD DL+LQQFREIYGQSPDVDRLKLSAVHRSDPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
+LVIFCGTG+VKVNAIRNIAGQI NKDTLHGLILIVQNQITNQAMKAV+LFS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMT S
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| A0A6J1I733 DNA-directed RNA polymerase V subunit 5A isoform X2 | 1.6e-96 | 70.86 | Show/hide |
Query: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
MEEDGF GEP++VE GTCLSSYID+GTTESHRY+LSRRTVLEMLRDRGYTIN SDIDL+LQQFREIYGQ PDVDRLKLSA HR+DPSKR
Subjt: MEEDGFEGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
+LVIFCGTGAVKV+AIRNIAGQI NK+TLHGLILIVQNQITNQAMKAVE+FS
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
FKVEIFQITDLLVNITKH LKPNHQVL EEEKQKLL+QYSIEEKQLPRMLRTDAIARYY LEKGQ+VKVTYDGDMT S
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 3.7e-21 | 29.88 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQ
E R + ++T+++MLRDRGY I S++ ++ QQF +G + + L R+D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQ
Query: ITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHVLKPNHQVLA
+T A R +I++K F +E+FQ ++LVNI +HVL P HQVL
Subjt: ITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHVLKPNHQVLA
Query: EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
EEK+ LL++Y+++E QLPR+ TD IARY+GL++GQVVK+
Subjt: EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
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| Q6BIJ0 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 8.2e-21 | 32.64 | Show/hide |
Query: RYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITN
R + S +TV EM+RDRGY I +ID+SL +FR S +V + KL +++P+ L F G++ V
Subjt: RYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITN
Query: QAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS-FKVEIFQITDLLVNITKHVLKPNHQVLAEE
FC +V + +RN I+ K+ G I I Q+ IT A K + S +E FQ DL+VNIT H L P H LA +
Subjt: QAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS-FKVEIFQITDLLVNITKHVLKPNHQVLAEE
Query: EKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
EK++LL++Y ++E QLPR+ R D + RY GL++G+VVK+
Subjt: EKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
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| Q9M1H8 DNA-directed RNA polymerase V subunit 5C | 7.1e-41 | 36.16 | Show/hide |
Query: EEDGFEGEPSQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
EE E S + GT C+S D G ES R++L+R T EMLRDRGY +N +++ L+L +FR ++G+ P+++RL++ RSDP K++LV+F GT +
Subjt: EEDGFEGEPSQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
V ++R LH QI+N LH +IL++Q+++ + A KA+ F
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTY
F VE F I DLLVNITKH+ +P ++L +EEK++LL+++++E+KQLP + D+ RYYGL+K QVVK+TY
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTY
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| Q9M1J2 DNA-directed RNA polymerase V subunit 5A | 4.6e-64 | 50.57 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDT
CLS Y+D + ESHRY+L+RR L+MLRDRGY ++ DI+LSL FR +YG+ PDVDRL++SA+HRSD +K+
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDT
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITK
V ++F GT VKVNAIR++ I +++T+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITK
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITK
Query: HVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
H LKP HQVL +EEK LLK++SIEEKQLPR+ + DAI RYYGLEKGQVVKV Y G++T S
Subjt: HVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| Q9ZVB9 DNA-directed RNA polymerases IV and V subunit 5B | 2.2e-58 | 45.59 | Show/hide |
Query: EGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIR
EG+ ++ G +S + E H+Y+L+RRT +EMLRDRGY ++ DI+LSLQQFR +YG+ PDVD L++SA HR D SK+
Subjt: EGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIR
Query: NIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIF
+ V+FCGTG VKVNA+R IA + +++ + GLIL++Q+ ITNQA+KAVELFSFKVE+F
Subjt: NIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIF
Query: QITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
+ITDLLVN++KHVL+P HQVL ++EK+ LLK++SIEEKQLPR+ D I RYYGLE GQV+KVTY +++ S
Subjt: QITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 1.6e-59 | 45.59 | Show/hide |
Query: EGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIR
EG+ ++ G +S + E H+Y+L+RRT +EMLRDRGY ++ DI+LSLQQFR +YG+ PDVD L++SA HR D SK+
Subjt: EGEPSQVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIR
Query: NIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIF
+ V+FCGTG VKVNA+R IA + +++ + GLIL++Q+ ITNQA+KAVELFSFKVE+F
Subjt: NIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIF
Query: QITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
+ITDLLVN++KHVL+P HQVL ++EK+ LLK++SIEEKQLPR+ D I RYYGLE GQV+KVTY +++ S
Subjt: QITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 2.6e-22 | 29.88 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQ
E R + ++T+++MLRDRGY I S++ ++ QQF +G + + L R+D S ++ + F V V ++ ++ +++ IL+VQ
Subjt: ESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQ
Query: ITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHVLKPNHQVLA
+T A R +I++K F +E+FQ ++LVNI +HVL P HQVL
Subjt: ITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHVLKPNHQVLA
Query: EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
EEK+ LL++Y+++E QLPR+ TD IARY+GL++GQVVK+
Subjt: EEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 5.1e-42 | 36.16 | Show/hide |
Query: EEDGFEGEPSQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
EE E S + GT C+S D G ES R++L+R T EMLRDRGY +N +++ L+L +FR ++G+ P+++RL++ RSDP K++LV+F GT +
Subjt: EEDGFEGEPSQVEFGT-CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAV
Query: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
V ++R LH QI+N LH +IL++Q+++ + A KA+ F
Subjt: KVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS
Query: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTY
F VE F I DLLVNITKH+ +P ++L +EEK++LL+++++E+KQLP + D+ RYYGL+K QVVK+TY
Subjt: FKVEIFQITDLLVNITKHVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTY
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 3.3e-65 | 50.57 | Show/hide |
Query: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDT
CLS Y+D + ESHRY+L+RR L+MLRDRGY ++ DI+LSL FR +YG+ PDVDRL++SA+HRSD +K+
Subjt: CLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDT
Query: LHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITK
V ++F GT VKVNAIR++ I +++T+ GLIL++QN +TNQA+KA+ELFSFKVEIFQITDLLVNITK
Subjt: LHGLILIVQNQITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITK
Query: HVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
H LKP HQVL +EEK LLK++SIEEKQLPR+ + DAI RYYGLEKGQVVKV Y G++T S
Subjt: HVLKPNHQVLAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSS
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 2.7e-19 | 32.92 | Show/hide |
Query: ESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQ
E R F RRTVL+MLRDRGYTI SD++L ++F V R FC T +N + NK+ L + N+
Subjt: ESHRYFLSRRTVLEMLRDRGYTINSSDIDLSLQQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQ
Query: ITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHVLKPNHQV
N A K + V + V V I+ D +H I++V IT A AV + +E+F+ +L+ NIT+H L + V
Subjt: ITNQAMKAVELFSFKVEIFQVLVIFCGTGAVKVNAIRNIAGQIANKDTLHGLILIVQNQITNQAMKAVELFS--FKVEIFQITDLLVNITKHVLKPNHQV
Query: LAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
L ++ K+KLL Y++++ QLPR+L TD +ARYYGL++GQVVK+
Subjt: LAEEEKQKLLKQYSIEEKQLPRMLRTDAIARYYGLEKGQVVKV
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