; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G016010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G016010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:27052395..27052676
RNA-Seq ExpressionLsi03G016010
SyntenyLsi03G016010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053873.1 hypothetical protein E6C27_scaffold135G002660 [Cucumis melo var. makuwa]2.4e-1461.29Show/hide
Query:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSSLSSSVTMDKKEVGASTSMAFHPPPSYILKQ
        MAGM  NFFPTDFYYPR  S  P+  QI+ KP         SKTVEDDRE +R L+K  +L    SSV ++KK VGASTSMAF PPPSYILKQ
Subjt:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSSLSSSVTMDKKEVGASTSMAFHPPPSYILKQ

KAB2059878.1 hypothetical protein ES319_A11G337700v1 [Gossypium barbadense]6.5e-0452.08Show/hide
Query:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD
        MAG+QYNFFPTDFYYPRP    P S  + + PP +   P+  K + DD
Subjt:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD

KAG6580888.1 hypothetical protein SDJN03_20890, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1355.79Show/hide
Query:  MAGMQYNFFPTDFYYPR---PPSPLPNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSSLSSSVTMDKKEVGASTSMAFHPPPSYILK
        MAGMQYNFFPTDFYYPR   PP P PNSV++ T  PL        +TVED++  ++S+D+PKA     +S+ M+K  VGAS S AF PPPS+ILK
Subjt:  MAGMQYNFFPTDFYYPR---PPSPLPNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSSLSSSVTMDKKEVGASTSMAFHPPPSYILK

PPR83118.1 hypothetical protein GOBAR_AA37593 [Gossypium barbadense]6.5e-0452.08Show/hide
Query:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD
        MAG+QYNFFPTDFYYPRP    P S  + + PP +   P+  K + DD
Subjt:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD

WP_217833416.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]8.8e-1774.68Show/hide
Query:  RPPSPL-PNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSS-LSSSVTMDKKEVGASTSMAFHPPPSYILKQ
        RPP P  PNSVQIS +P  STV P P KTVEDDREAD SLDKPKA  S LSSS+ +D K VGASTSMAF PPPSYILKQ
Subjt:  RPPSPL-PNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSS-LSSSVTMDKKEVGASTSMAFHPPPSYILKQ

TrEMBL top hitse value%identityAlignment
A0A2P5VW97 Uncharacterized protein3.2e-0452.08Show/hide
Query:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD
        MAG+QYNFFPTDFYYPRP    P S  + + PP +   P+  K + DD
Subjt:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD

A0A5A7UD60 Uncharacterized protein1.2e-1461.29Show/hide
Query:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSSLSSSVTMDKKEVGASTSMAFHPPPSYILKQ
        MAGM  NFFPTDFYYPR  S  P+  QI+ KP         SKTVEDDRE +R L+K  +L    SSV ++KK VGASTSMAF PPPSYILKQ
Subjt:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSSLSSSVTMDKKEVGASTSMAFHPPPSYILKQ

A0A5D2EUJ3 Uncharacterized protein3.2e-0452.08Show/hide
Query:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD
        MAG+QYNFFPTDFYYPRP    P S  + + PP +   P+  K + DD
Subjt:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD

A0A5D2XEG0 Uncharacterized protein3.2e-0452.08Show/hide
Query:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD
        MAG+QYNFFPTDFYYPRP    P S  + + PP +   P+  K + DD
Subjt:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD

A0A5J5TZR4 Uncharacterized protein3.2e-0452.08Show/hide
Query:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD
        MAG+QYNFFPTDFYYPRP    P S  + + PP +   P+  K + DD
Subjt:  MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATGCAATACAACTTCTTTCCTACAGATTTCTACTACCCTCGTCCACCGTCGCCGCTGCCTAATTCCGTTCAAATCTCCACCAAGCCACCACTGTCTACAGT
TGCTCCTCTGCCGAGCAAAACAGTTGAAGACGATCGAGAAGCTGACCGGTCACTCGACAAACCGAAAGCATTGTCGTCGTTGTCGTCGTCTGTGACCATGGACAAGAAGG
AGGTTGGAGCTTCTACTTCCATGGCGTTTCATCCTCCTCCCTCTTATATCCTCAAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATGCAATACAACTTCTTTCCTACAGATTTCTACTACCCTCGTCCACCGTCGCCGCTGCCTAATTCCGTTCAAATCTCCACCAAGCCACCACTGTCTACAGT
TGCTCCTCTGCCGAGCAAAACAGTTGAAGACGATCGAGAAGCTGACCGGTCACTCGACAAACCGAAAGCATTGTCGTCGTTGTCGTCGTCTGTGACCATGGACAAGAAGG
AGGTTGGAGCTTCTACTTCCATGGCGTTTCATCCTCCTCCCTCTTATATCCTCAAACAATGA
Protein sequenceShow/hide protein sequence
MAGMQYNFFPTDFYYPRPPSPLPNSVQISTKPPLSTVAPLPSKTVEDDREADRSLDKPKALSSLSSSVTMDKKEVGASTSMAFHPPPSYILKQ