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Lsi03G016750 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G016750
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmyb family transcription factor PHL7-like
Genome locationchr03:27944519..27946514
RNA-Seq ExpressionLsi03G016750
SyntenyLsi03G016750
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR044848 - PHR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053946.1 protein PHR1-LIKE 1-like isoform X1 [Cucumis melo var. makuwa]1.9e-3389.29Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGYFLYSNTYILLIS
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGYFL SN  +  +S
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGYFLYSNTYILLIS

KAG7027744.1 Myb family transcription factor PHL7, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3378.57Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG---------YFLYSNTYILLISLRAWA
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG         YF+ S  Y+ L+   AWA
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSG---------YFLYSNTYILLISLRAWA

XP_004136602.1 myb family transcription factor PHL7 isoform X2 [Cucumis sativus]7.6e-3098.55Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

XP_022983088.1 myb family transcription factor PHL7-like [Cucurbita maxima]1.7e-2997.1Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQGASVAVLGGS+AKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

XP_038904135.1 myb family transcription factor PHL7-like [Benincasa hispida]7.6e-3098.55Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

TrEMBL top hitse value%identityAlignment
A0A0A0LF93 HTH myb-type domain-containing protein3.7e-3098.55Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

A0A5A7UI57 Protein PHR1-LIKE 1-like isoform X19.3e-3489.29Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGYFLYSNTYILLIS
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGYFL SN  +  +S
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGYFLYSNTYILLIS

A0A6J1DJV4 myb family transcription factor PHL7-like isoform X11.8e-2997.1Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

A0A6J1I5A6 myb family transcription factor PHL7-like isoform X11.8e-2997.1Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQ ASVAVLGGSTAKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

A0A6J1J6S2 myb family transcription factor PHL7-like8.2e-3097.1Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        MYHAKKFSTASLVPHKSQGAEQGASVAVLGGS+AKS MPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

SwissProt top hitse value%identityAlignment
E5L8F7 Myb family transcription factor IPN27.9e-0680Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        K RLRWT +LH+RFVDA+TQLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD

Q8LAJ7 Protein PHR1-LIKE 31.6e-0684Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        K RLRWTS+LH+RFVDA+TQLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD

Q94A57 Protein PHR1-LIKE 23.6e-0680Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        K RLRWT++LH+RFVDA+TQLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD

Q9SAK5 Myb family transcription factor APL1.2e-0643.48Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        M+HAKK       P    G+ +  ++ V G S       P    K RLRWT +LH+RFVDA+ QLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

Q9SJW0 Myb family transcription factor PHL74.7e-0680Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        KQRLRWT +LH+RFVDA+ QLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD

Arabidopsis top hitse value%identityAlignment
AT1G79430.2 Homeodomain-like superfamily protein8.7e-0843.48Show/hide
Query:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD
        M+HAKK       P    G+ +  ++ V G S       P    K RLRWT +LH+RFVDA+ QLGGPD
Subjt:  MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPD

AT3G24120.1 Homeodomain-like superfamily protein2.5e-0780Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        K RLRWT++LH+RFVDA+TQLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD

AT3G24120.2 Homeodomain-like superfamily protein2.5e-0780Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        K RLRWT++LH+RFVDA+TQLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD

AT4G13640.1 Homeodomain-like superfamily protein1.1e-0784Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        K RLRWTS+LH+RFVDA+TQLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD

AT4G13640.2 Homeodomain-like superfamily protein1.1e-0784Show/hide
Query:  KQRLRWTSDLHDRFVDAITQLGGPD
        K RLRWTS+LH+RFVDA+TQLGGPD
Subjt:  KQRLRWTSDLHDRFVDAITQLGGPD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCATGCTAAGAAATTTTCAACTGCGAGCTTAGTTCCACATAAATCTCAAGGTGCTGAACAAGGTGCGAGTGTTGCGGTTCTTGGTGGCTCTACAGCCAAA
AGTCAAATGCCACCTGGAGGAGGTGGAAAACAACGTTTGCGATGGACATCGGATCTTCATGATCGTTTCGTCGATGCCATCACACAACTTGGTGGACCAGATAGT
GGGTATTTTCTTTATAGTAACACATATATCTTGTTGATATCCTTGCGTGCTTGGGCCGGCTTGTGCCCATCTGACTATTCTCGGAGCACAACTGCT
mRNA sequenceShow/hide mRNA sequence
AAAGTTTCTCCGAGTTGTATCTCTCCTCATCATGTATCATGCTAAGAAATTTTCAACTGCGAGCTTAGTTCCACATAAATCTCAAGGTGCTGAACAAGGTGCGAG
TGTTGCGGTTCTTGGTGGCTCTACAGCCAAAAGTCAAATGCCACCTGGAGGAGGTGGAAAACAACGTTTGCGATGGACATCGGATCTTCATGATCGTTTCGTCGA
TGCCATCACACAACTTGGTGGACCAGATAGTGGGTATTTTCTTTATAGTAACACATATATCTTGTTGATATCCTTGCGTGCTTGGGCCGGCTTGTGCCCATCTGA
CTATTCTCGGAGCACAACTGCT
Protein sequenceShow/hide protein sequence
MYHAKKFSTASLVPHKSQGAEQGASVAVLGGSTAKSQMPPGGGGKQRLRWTSDLHDRFVDAITQLGGPDSGYFLYSNTYILLISLRAWAGLCPSDYSRSTTA