; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G017540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G017540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCalcium load-activated calcium channel like
Genome locationchr03:28909006..28915938
RNA-Seq ExpressionLsi03G017540
SyntenyLsi03G017540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACJ83384.1 unknown, partial [Medicago truncatula]2.0e-1341.28Show/hide
Query:  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR----------LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERE
        V GSGIG  PAPAPLGG  PKNFC+ VL+LME +KYKNA+ QSVGS PCNPR          L       L     +      ++ ++       L+  +
Subjt:  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR----------LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERE

Query:  TGLDAIDLL
        + LD++ L+
Subjt:  TGLDAIDLL

KAF4370670.1 hypothetical protein F8388_025049 [Cannabis sativa]3.1e-2248.2Show/hide
Query:  IGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEER-------ETGLDAIDL
        +GNNPAPAPLGG NPKNFC+LV +L+EQRKYKNA+ QS                         ++KDD++++ N+GAGF+L++R       ETGL+ I+L
Subjt:  IGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEER-------ETGLDAIDL

Query:  LGLGFLDGDF-GAVGLHGLELFGGLVDGGSKGFVRVGAV
        LG     GD  G+V LHG EL  G V+GGS+G V VG+V
Subjt:  LGLGFLDGDF-GAVGLHGLELFGGLVDGGSKGFVRVGAV

KAF5933260.1 hypothetical protein HYC85_029431 [Camellia sinensis]2.1e-1543.26Show/hide
Query:  HKHFVLGSGIGNNPAP-APLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNP----------RLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFK
        H   +LG GIG + AP APLGGENPKNF +LV  L+E  KYKNAI QSVGSSPC P            +  F   L  +   ++ K  ++ ++       
Subjt:  HKHFVLGSGIGNNPAP-APLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNP----------RLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFK

Query:  LEER------ETGLDAIDLLGLGFLDGDFG--AVGLHGLEL
        L+        E GLD IDLLGLG L+ + G   V  HGLEL
Subjt:  LEER------ETGLDAIDLLGLGFLDGDFG--AVGLHGLEL

PSS36290.1 Calcium load-activated calcium channel like [Actinidia chinensis var. chinensis]2.4e-1137.88Show/hide
Query:  GGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPC--------NPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAID----------
        G   PKNFC+LV + +E +KY+NA  QSVGSSPC        + + KR+ G+ LALEER E+++DDE+ + ++ AG +LEE +     ++          
Subjt:  GGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPC--------NPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAID----------

Query:  -LLGLGFLDGDFGAVGLHGLELFGGLVDGGSK
          L LGFL  +     +  L+L GG + G  K
Subjt:  -LLGLGFLDGDFGAVGLHGLELFGGLVDGGSK

RHN47423.1 hypothetical protein MtrunA17_Chr7g0252831 [Medicago truncatula]4.4e-1340.37Show/hide
Query:  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR----------LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERE
        V GSGIG  PAPAPLGG  PKNFC+ VL+LME +KY+NA+ QSVGS PCNPR          L       L     +      ++ ++       L+  +
Subjt:  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR----------LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERE

Query:  TGLDAIDLL
        + LD++ L+
Subjt:  TGLDAIDLL

TrEMBL top hitse value%identityAlignment
A0A2R6S1Y8 Calcium load-activated calcium channel like1.2e-1137.88Show/hide
Query:  GGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPC--------NPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAID----------
        G   PKNFC+LV + +E +KY+NA  QSVGSSPC        + + KR+ G+ LALEER E+++DDE+ + ++ AG +LEE +     ++          
Subjt:  GGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPC--------NPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAID----------

Query:  -LLGLGFLDGDFGAVGLHGLELFGGLVDGGSK
          L LGFL  +     +  L+L GG + G  K
Subjt:  -LLGLGFLDGDFGAVGLHGLELFGGLVDGGSK

A0A396H3X0 Uncharacterized protein2.1e-1340.37Show/hide
Query:  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR----------LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERE
        V GSGIG  PAPAPLGG  PKNFC+ VL+LME +KY+NA+ QSVGS PCNPR          L       L     +      ++ ++       L+  +
Subjt:  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR----------LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERE

Query:  TGLDAIDLL
        + LD++ L+
Subjt:  TGLDAIDLL

A0A7J6FLQ1 Uncharacterized protein1.5e-2248.2Show/hide
Query:  IGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEER-------ETGLDAIDL
        +GNNPAPAPLGG NPKNFC+LV +L+EQRKYKNA+ QS                         ++KDD++++ N+GAGF+L++R       ETGL+ I+L
Subjt:  IGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEER-------ETGLDAIDL

Query:  LGLGFLDGDF-GAVGLHGLELFGGLVDGGSKGFVRVGAV
        LG     GD  G+V LHG EL  G V+GGS+G V VG+V
Subjt:  LGLGFLDGDF-GAVGLHGLELFGGLVDGGSKGFVRVGAV

A0A7J7FXZ3 Uncharacterized protein1.0e-1543.26Show/hide
Query:  HKHFVLGSGIGNNPAP-APLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNP----------RLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFK
        H   +LG GIG + AP APLGGENPKNF +LV  L+E  KYKNAI QSVGSSPC P            +  F   L  +   ++ K  ++ ++       
Subjt:  HKHFVLGSGIGNNPAP-APLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNP----------RLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFK

Query:  LEER------ETGLDAIDLLGLGFLDGDFG--AVGLHGLEL
        L+        E GLD IDLLGLG L+ + G   V  HGLEL
Subjt:  LEER------ETGLDAIDLLGLGFLDGDFG--AVGLHGLEL

B7FFI2 Uncharacterized protein (Fragment)9.6e-1441.28Show/hide
Query:  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR----------LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERE
        V GSGIG  PAPAPLGG  PKNFC+ VL+LME +KYKNA+ QSVGS PCNPR          L       L     +      ++ ++       L+  +
Subjt:  VLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGSSPCNPR----------LKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERE

Query:  TGLDAIDLL
        + LD++ L+
Subjt:  TGLDAIDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAATCAAATTCACCATCAAAAATAGGTAAACATAGGCAAAGGGACAAGAACCCGATCCTCAACCAAGGCGGCAGCGTTCTTCTAAGTTCTGAGACTGATGGCGG
GTTCGGCGATTTTACTTTTTTCATGATTATTTCTACATTTCTAATAACAAAAATATTTGTGACTCAAAATCATAAGCATTTCGTCTTAGGATCTGGCATCGGGAACAACC
CAGCGCCGGCGCCTCTTGGCGGAGAGAATCCCAAGAACTTCTGCAGATTGGTCCTAATGCTAATGGAACAGAGGAAGTACAAGAACGCCATAGCGCAATCGGTAGGATCG
TCACCCTGTAACCCTCGGCTTAAACGGCAATTTGGCAACAACCTTGCCCTCGAAGAGCGAATTGAGCAATCCAAAGACGACGAACAGAACAAGAGCAACAACGGCGCCGG
ATTTAAACTTGAAGAGCGAGAGACTGGTCTCGACGCGATCGATCTTCTTGGTCTTGGATTTCTTGACGGTGATTTTGGAGCTGTCGGTCTTCATGGTCTCGAGCTTTTTG
GCGGCCTTGTCGATGGAGGATCGAAGGGTTTTGTAAGAGTTGGTGCGGTAGATGAGAATCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAATCAAATTCACCATCAAAAATAGGTAAACATAGGCAAAGGGACAAGAACCCGATCCTCAACCAAGGCGGCAGCGTTCTTCTAAGTTCTGAGACTGATGGCGG
GTTCGGCGATTTTACTTTTTTCATGATTATTTCTACATTTCTAATAACAAAAATATTTGTGACTCAAAATCATAAGCATTTCGTCTTAGGATCTGGCATCGGGAACAACC
CAGCGCCGGCGCCTCTTGGCGGAGAGAATCCCAAGAACTTCTGCAGATTGGTCCTAATGCTAATGGAACAGAGGAAGTACAAGAACGCCATAGCGCAATCGGTAGGATCG
TCACCCTGTAACCCTCGGCTTAAACGGCAATTTGGCAACAACCTTGCCCTCGAAGAGCGAATTGAGCAATCCAAAGACGACGAACAGAACAAGAGCAACAACGGCGCCGG
ATTTAAACTTGAAGAGCGAGAGACTGGTCTCGACGCGATCGATCTTCTTGGTCTTGGATTTCTTGACGGTGATTTTGGAGCTGTCGGTCTTCATGGTCTCGAGCTTTTTG
GCGGCCTTGTCGATGGAGGATCGAAGGGTTTTGTAAGAGTTGGTGCGGTAGATGAGAATCCATGA
Protein sequenceShow/hide protein sequence
MKESNSPSKIGKHRQRDKNPILNQGGSVLLSSETDGGFGDFTFFMIISTFLITKIFVTQNHKHFVLGSGIGNNPAPAPLGGENPKNFCRLVLMLMEQRKYKNAIAQSVGS
SPCNPRLKRQFGNNLALEERIEQSKDDEQNKSNNGAGFKLEERETGLDAIDLLGLGFLDGDFGAVGLHGLELFGGLVDGGSKGFVRVGAVDENP