; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G017730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G017730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal protein
Genome locationchr03:29138722..29142098
RNA-Seq ExpressionLsi03G017730
SyntenyLsi03G017730
Gene Ontology termsGO:0000470 - maturation of LSU-rRNA (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002143 - Ribosomal protein L1
IPR016095 - Ribosomal protein L1, 3-layer alpha/beta-sandwich
IPR023673 - Ribosomal protein L1, conserved site
IPR023674 - Ribosomal protein L1-like
IPR028364 - Ribosomal protein L1/ribosomal biogenesis protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458587.1 PREDICTED: 60S ribosomal protein L10a [Cucumis melo]1.3e-11198.15Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGK+YRVF
Subjt:  RCLYLKSTMGKSYRVF

XP_022153072.1 60S ribosomal protein L10a-like [Momordica charantia]1.7e-11196.76Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQSDALREAIS+IF+DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEA+IKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGK+YRVF
Subjt:  RCLYLKSTMGKSYRVF

XP_022932197.1 60S ribosomal protein L10a-like [Cucurbita moschata]2.9e-11197.22Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+ALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEA+IKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGKSYRVF
Subjt:  RCLYLKSTMGKSYRVF

XP_031736233.1 60S ribosomal protein L10a [Cucumis sativus]2.2e-11196.76Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQSDALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASH+EEAEKIGL+YMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASE+IIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGN++M+EKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGKSYRVF
Subjt:  RCLYLKSTMGKSYRVF

XP_038893874.1 60S ribosomal protein L10a [Benincasa hispida]1.2e-11299.07Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQSDALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKS+MGKSYRVF
Subjt:  RCLYLKSTMGKSYRVF

TrEMBL top hitse value%identityAlignment
A0A0A0KEW8 Ribosomal protein6.2e-11298.15Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGK+YRVF
Subjt:  RCLYLKSTMGKSYRVF

A0A0A0LVE6 Ribosomal protein1.1e-11196.76Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQSDALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASH+EEAEKIGL+YMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASE+IIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGN++M+EKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGKSYRVF
Subjt:  RCLYLKSTMGKSYRVF

A0A1S3C7Q8 Ribosomal protein6.2e-11298.15Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGK+YRVF
Subjt:  RCLYLKSTMGKSYRVF

A0A6J1DHY4 Ribosomal protein8.1e-11296.76Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQSDALREAIS+IF+DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEA+IKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGK+YRVF
Subjt:  RCLYLKSTMGKSYRVF

A0A6J1HYM1 Ribosomal protein1.4e-11197.22Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+ALREAISSIF DSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEA+IKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMGKSYRVF
Subjt:  RCLYLKSTMGKSYRVF

SwissProt top hitse value%identityAlignment
B7F845 60S ribosomal protein L10a1.2e-10488.43Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ QN+QMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLY+KSTMGK  RVF
Subjt:  RCLYLKSTMGKSYRVF

B8B9K6 60S ribosomal protein L10a1.2e-10488.43Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ QN+QMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLY+KSTMGK  RVF
Subjt:  RCLYLKSTMGKSYRVF

P59230 60S ribosomal protein L10a-28.1e-10186.11Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAK YHAFLASE++IKQIPRLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMG   R+F
Subjt:  RCLYLKSTMGKSYRVF

P59231 60S ribosomal protein L10a-32.1e-10187.56Show/hide
Query:  MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLV
        MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRPKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLV
Subjt:  MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLV

Query:  KKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQN
        KKLAKK+HAFLASE++IKQIPRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQN
Subjt:  KKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQN

Query:  VRCLYLKSTMGKSYRVF
        VRCLYLKSTMG   RVF
Subjt:  VRCLYLKSTMGKSYRVF

Q8VZB9 60S ribosomal protein L10a-19.6e-10287.04Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASE++IKQIPRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMG   R+F
Subjt:  RCLYLKSTMGKSYRVF

Arabidopsis top hitse value%identityAlignment
AT1G08360.1 Ribosomal protein L1p/L10e family6.8e-10387.04Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAKKYHAFLASE++IKQIPRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMG   R+F
Subjt:  RCLYLKSTMGKSYRVF

AT2G27530.1 Ribosomal protein L1p/L10e family5.8e-10286.11Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAK YHAFLASE++IKQIPRLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMG   R+F
Subjt:  RCLYLKSTMGKSYRVF

AT2G27530.2 Ribosomal protein L1p/L10e family5.8e-10286.11Show/hide
Query:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK
        MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVK
Subjt:  MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVK

Query:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV
        KLAK YHAFLASE++IKQIPRLLGPGLNKAGKFPTLV+HQE+LE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQNV
Subjt:  KLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNV

Query:  RCLYLKSTMGKSYRVF
        RCLYLKSTMG   R+F
Subjt:  RCLYLKSTMGKSYRVF

AT5G22440.1 Ribosomal protein L1p/L10e family1.5e-10287.56Show/hide
Query:  MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLV
        MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRPKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLV
Subjt:  MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLV

Query:  KKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQN
        KKLAKK+HAFLASE++IKQIPRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQN
Subjt:  KKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQN

Query:  VRCLYLKSTMGKSYRVF
        VRCLYLKSTMG   RVF
Subjt:  VRCLYLKSTMGKSYRVF

AT5G22440.2 Ribosomal protein L1p/L10e family1.5e-10287.56Show/hide
Query:  MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLV
        MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PRPKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLV
Subjt:  MSKLQSDALREAISSIFIDSNE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLV

Query:  KKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQN
        KKLAKK+HAFLASE++IKQIPRLLGPGLNKAGKFPTLV+HQE+LESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQNVQMSVNFLVSLLKKNWQN
Subjt:  KKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQN

Query:  VRCLYLKSTMGKSYRVF
        VRCLYLKSTMG   RVF
Subjt:  VRCLYLKSTMGKSYRVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCTATCTCATCTATCTTCATTGATAGCAATGAGAAAAAGAGAAAGTTTACTGAAACCATTGAGCTTCAGATCGGGCT
GAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACGTTG
AAGAGGCTGAGAAAATTGGTCTAGACTATATGGATGTGGAAGGCTTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTG
GCATCTGAAGCTATAATCAAGCAGATCCCTCGTCTTCTAGGCCCTGGTCTCAACAAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAACGCTTGAATCCAAAGT
CAACGAGACAAAGGCAATGGTCAAGTTTCAACTGAAGAAGGTCCTTTGTATGGGAGTTGCCGTTGGAAACATTGCCATGGAAGAGAAGCAAGTCTTCCAAAATGTTCAAA
TGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAACTGGCAGAATGTTAGGTGCCTGTACCTGAAGAGCACAATGGGCAAGTCGTACCGGGTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
TTCTTCTCCGGTATGCCGTCGCTGGACTGAAGTGTATAGTGTCTTTGCGAAGGCGGAGATTCGAAAATGAGTAAGCTTCAGAGTGATGCATTGAGAGAAGCTATCTCATC
TATCTTCATTGATAGCAATGAGAAAAAGAGAAAGTTTACTGAAACCATTGAGCTTCAGATCGGGCTGAAGAACTATGATCCTCAAAAGGACAAGCGTTTCAGTGGTTCTG
TGAAGTTGCCACACATTCCCCGTCCCAAGATGAAGATATGCATGCTTGGGGATGCCTCACACGTTGAAGAGGCTGAGAAAATTGGTCTAGACTATATGGATGTGGAAGGC
TTGAAGAAGCTAAATAAGAACAAGAAATTGGTGAAGAAACTTGCCAAAAAATACCATGCCTTTTTGGCATCTGAAGCTATAATCAAGCAGATCCCTCGTCTTCTAGGCCC
TGGTCTCAACAAAGCAGGAAAGTTCCCAACATTGGTGACACACCAAGAAACGCTTGAATCCAAAGTCAACGAGACAAAGGCAATGGTCAAGTTTCAACTGAAGAAGGTCC
TTTGTATGGGAGTTGCCGTTGGAAACATTGCCATGGAAGAGAAGCAAGTCTTCCAAAATGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAACTGGCAG
AATGTTAGGTGCCTGTACCTGAAGAGCACAATGGGCAAGTCGTACCGGGTTTTCTAAGCTCTATTAGCAATCTAGTCAATCTTGCGTGTTCGATCTCTTTACTGTCTACA
TTAACGTTATTTTTTGAAGAGCAGTTTTGTGAATTGAGCGTTTTTGAATGATTCTTGATCAAAGAAACAGTGATGTTTTCTTCTCCTTTAAAGTGACAATTGATAATGAA
GTTTTTTTATTCCCATCAACC
Protein sequenceShow/hide protein sequence
MSKLQSDALREAISSIFIDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFL
ASEAIIKQIPRLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF