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Lsi03G017960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G017960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMal d 1-associated protein
Genome locationchr03:29391207..29395716
RNA-Seq ExpressionLsi03G017960
SyntenyLsi03G017960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136529.1 fra a 1-associated protein [Cucumis sativus]2.9e-5278.42Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRD+  +SDS A D  KFNNS+ PSSSD CSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVI+SNKE TEEDVTDQMVNRSFS GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  --SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
          SEHRP DFPGLRSDIDAIEQSLFGSM+G F+  + ++
Subjt:  --SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

XP_008442953.1 PREDICTED: uncharacterized protein LOC103486704 [Cucumis melo]1.9e-5682.48Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVW D+ G+ DSSA DGAKF+NS+ PSSSDRCSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVIQSNKEFTEEDVTDQMVNRSF  GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
        SEHRPFDFPGLRSDIDAIEQSLFGSM+G F+  + ++
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

XP_022151462.1 uncharacterized protein LOC111019393 [Momordica charantia]2.7e-5069.38Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRDE GESD  AGD       S  SS DRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSNKEFTEEDV DQ+VNRSFSSG+
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLRMVSL-VLSEIHPYSTESLRPPRR
        S H+PF FPGLRSDI+AIE++LFGSM+G F+  + ++     VL + H +  ES  P  R
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLRMVSL-VLSEIHPYSTESLRPPRR

XP_023539788.1 uncharacterized protein LOC111800367 [Cucurbita pepo subsp. pepo]1.3e-4977.54Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG
        MG VWR  +GE DS AGDG   NN S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT+++V NRSFSSG
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
        SSE++PF+FPGLRSDI+AIE SLFGSM+G F   + +R
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

XP_038905970.1 fra a 1-associated protein [Benincasa hispida]7.1e-5986.13Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRD+ GE DSSA D AK NNS+ PS SDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFS GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
        SEHRPFDFPGLRSDIDAIEQSLFGSM+G F+  + ++
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

TrEMBL top hitse value%identityAlignment
A0A0A0LGU7 Uncharacterized protein1.4e-5278.42Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRD+  +SDS A D  KFNNS+ PSSSD CSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVI+SNKE TEEDVTDQMVNRSFS GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  --SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
          SEHRP DFPGLRSDIDAIEQSLFGSM+G F+  + ++
Subjt:  --SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

A0A1S3B6X7 uncharacterized protein LOC1034867049.4e-5782.48Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVW D+ G+ DSSA DGAKF+NS+ PSSSDRCSTR VV+S CKTEEVEPGKFVRKCERTEEILRDCIGRP EVIQSNKEFTEEDVTDQMVNRSF  GS
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
        SEHRPFDFPGLRSDIDAIEQSLFGSM+G F+  + ++
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

A0A6J1DDK9 uncharacterized protein LOC1110193931.3e-5069.38Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGWVWRDE GESD  AGD       S  SS DRCSTRKVVKSQC+TEEVEPGKFVRKCERTEEILRDC+GRPVEVIQSNKEFTEEDV DQ+VNRSFSSG+
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLRMVSL-VLSEIHPYSTESLRPPRR
        S H+PF FPGLRSDI+AIE++LFGSM+G F+  + ++     VL + H +  ES  P  R
Subjt:  SEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLRMVSL-VLSEIHPYSTESLRPPRR

A0A6J1FHK7 uncharacterized protein LOC1114458456.5e-5077.54Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG
        MG VWR  +GE DS AGDG   NN S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT+++V NRSFSSG
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
        SSE++PF+FPGLRSDI+AIE SLFGSM+G F   + +R
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

A0A6J1KVN4 uncharacterized protein LOC1114986068.5e-5077.54Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG
        MG VWR  +GE DS AGDG   NN S  SS DRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSN+EFTEEDVT+++V NRSFSSG
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMV-NRSFSSG

Query:  SSEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
        SSE++PF+FPGLRSDI+AIE SLFGSM+G F   + +R
Subjt:  SSEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

SwissProt top hitse value%identityAlignment
W5X2N3 Fra a 1-associated protein3.0e-3654.29Show/hide
Query:  MGWVWRDEN---GESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFS
        MGWVW+D++   G  + SA D       S     DRCSTRKVV++QCKTEEVEPGKF+RKCE+TEE+LRDC+GRP+EV+QSNKE+TE+DVTDQ++  S S
Subjt:  MGWVWRDEN---GESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFS

Query:  SGSSEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR
         GS+++  F+FPGL+ DID IE +  G +   F+  + ++
Subjt:  SGSSEHRPFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLR

Arabidopsis top hitse value%identityAlignment
AT2G35900.1 unknown protein4.6e-3249.33Show/hide
Query:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS
        MGW+W D++  S + A    K    S  ++++ CST  VV+SQCKTEEVEPGKFVRKC++TEEILR C G+P EV+QSN E TEEDVTDQMV RS     
Subjt:  MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGS

Query:  SEHR-PFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLRMVSL-VLSEIHP
         E + P +FPGLR D+DAIE+     M+  F   + +      ++ + HP
Subjt:  SEHR-PFDFPGLRSDIDAIEQSLFGSMRGSFKPPKRLRMVSL-VLSEIHP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGGTCTGGAGAGACGAGAACGGCGAATCGGATTCATCCGCGGGAGATGGCGCTAAGTTCAACAATTCCAGCCTTCCGTCCTCCAGCGATCGGTGTTCTACCAG
AAAAGTGGTGAAGTCGCAGTGCAAGACCGAGGAGGTTGAGCCCGGAAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTTAGAGACTGCATTGGAAGGCCAGTCG
AAGTGATACAGTCCAACAAGGAATTTACAGAAGAGGATGTAACGGATCAGATGGTCAATAGGTCATTCTCATCGGGATCGTCCGAACATCGACCATTTGATTTCCCTGGG
CTCCGTAGCGATATTGATGCCATTGAGCAGAGTCTCTTTGGCAGCATGAGGGGTTCTTTCAAGCCGCCGAAGAGATTAAGAATGGTTTCTTTGGTTCTTTCAGAGATCCA
CCCCTATTCAACAGAGAGTCTTCGTCCTCCCCGTCGATGA
mRNA sequenceShow/hide mRNA sequence
TTCAATCTCTCTCGTGTCTTCTGAAGCCGTGGCGCTCAAGAAAGACTCCACTGTAAAAGAGAATCTCGTGGAAGGGACGAAGGTTCGCGATCTCGAGCTTCGAAAATGGG
ATGGGTCTGGAGAGACGAGAACGGCGAATCGGATTCATCCGCGGGAGATGGCGCTAAGTTCAACAATTCCAGCCTTCCGTCCTCCAGCGATCGGTGTTCTACCAGAAAAG
TGGTGAAGTCGCAGTGCAAGACCGAGGAGGTTGAGCCCGGAAAATTCGTCAGGAAGTGCGAGAGAACCGAGGAGATTCTTAGAGACTGCATTGGAAGGCCAGTCGAAGTG
ATACAGTCCAACAAGGAATTTACAGAAGAGGATGTAACGGATCAGATGGTCAATAGGTCATTCTCATCGGGATCGTCCGAACATCGACCATTTGATTTCCCTGGGCTCCG
TAGCGATATTGATGCCATTGAGCAGAGTCTCTTTGGCAGCATGAGGGGTTCTTTCAAGCCGCCGAAGAGATTAAGAATGGTTTCTTTGGTTCTTTCAGAGATCCACCCCT
ATTCAACAGAGAGTCTTCGTCCTCCCCGTCGATGAGACGAGGAATACCCATCGAAGATCATGAGCCAGTGTTCTTCTCTAATCCGAAAGAGCCCGATTCCGGTCACGTTG
ACCTATCTGGATTGGCCAGGGATGTCTAAATGCCCTAAATGAACCTCTGTCCTTTTTTTTCAGATGTTAGATACGATGGGTACACAGTATACTATCTTTGTTTTTGGTGG
CTGTACATTTGGTAAGGGTTTTTTTTTTTTTTGTACGGATAGGTACACAGTATATTATGTTTATTTTTTTATCAATAAAATATACACTTTAGTTTTCCTTCAGAA
Protein sequenceShow/hide protein sequence
MGWVWRDENGESDSSAGDGAKFNNSSLPSSSDRCSTRKVVKSQCKTEEVEPGKFVRKCERTEEILRDCIGRPVEVIQSNKEFTEEDVTDQMVNRSFSSGSSEHRPFDFPG
LRSDIDAIEQSLFGSMRGSFKPPKRLRMVSLVLSEIHPYSTESLRPPRR