; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G018310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G018310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNDR1/HIN1-like protein 10
Genome locationchr03:29798417..29800197
RNA-Seq ExpressionLsi03G018310
SyntenyLsi03G018310
Gene Ontology termsGO:0098542 - defense response to other organism (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup
IPR044839 - Protein NDR1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580740.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2763.3Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R
        V+IGFIV VGI+LL LGLVY P+ L+F+VT A+LT+F+   NQL+Y   LN++I NPNKRYRVYY T E+ VLYKN+RL++  LP FFQDTK+TAV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R

Query:  EFEGQQLLL
         FEGQ+L+L
Subjt:  EFEGQQLLL

KAG7017492.1 NDR1/HIN1-like protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2763.3Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R
        V+IGFIV VGI+LL LGLVY P+ L+F+VT A+LT+F+   NQL+Y   LN++I NPNKRYRVYY T E+ VLYKN+RL++  LP FFQDTK+TAV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R

Query:  EFEGQQLLL
         FEGQ+L+L
Subjt:  EFEGQQLLL

XP_008442907.1 PREDICTED: NDR1/HIN1-Like protein 3-like [Cucumis melo]7.6e-2756.48Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSRE
        + I  I+ VG+ +L L L++ PN +KF+VT A+LT+F+ ++NQLH+ FALN+++RNPNKR  VYY T E   +YKN+RL  QWLPPF+Q  KTTAV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSRE

Query:  FEGQQLLL
        F GQQLLL
Subjt:  FEGQQLLL

XP_022935274.1 NDR1/HIN1-like protein 10 [Cucurbita moschata]1.5e-2763.3Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R
        V+IGFIV VGI+LL LGLVY P+ L+F+VT A+LT+F+   NQL+Y   LN++I NPNKRYRVYY T E+ VLYKN+RL++  LP FFQDTK+TAV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R

Query:  EFEGQQLLL
         FEGQ+L+L
Subjt:  EFEGQQLLL

XP_023528863.1 NDR1/HIN1-like protein 10 [Cucurbita pepo subsp. pepo]2.6e-2762.39Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R
        V+IGFIV VGI+LL LG+VY P+ L+F+VT A+LT+F+   NQL+Y   LN++I NPNKRYRVYY T E+ VLYKN+RL++  LP FFQDTK+TAV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R

Query:  EFEGQQLLL
         FEGQ+L+L
Subjt:  EFEGQQLLL

TrEMBL top hitse value%identityAlignment
A0A0A0LB18 LEA_2 domain-containing protein4.8e-2758.97Show/hide
Query:  MVVSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYV---NNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTA
        ++V+IG IV  GILLL LGLVY+P+ L F+V+ A+LT+F+     +NQLHY  ALN++IRNPNKRYRVYY   E+ VLYKN+RL  QWLP FFQ+TK+T 
Subjt:  MVVSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYV---NNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTA

Query:  VVS-REFEGQQLLLPSS
        VVS   F+GQ+L+  +S
Subjt:  VVS-REFEGQQLLLPSS

A0A1S3B7J7 NDR1/HIN1-Like protein 3-like3.7e-2756.48Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSRE
        + I  I+ VG+ +L L L++ PN +KF+VT A+LT+F+ ++NQLH+ FALN+++RNPNKR  VYY T E   +YKN+RL  QWLPPF+Q  KTTAV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSRE

Query:  FEGQQLLL
        F GQQLLL
Subjt:  FEGQQLLL

A0A5A7TK31 NDR1/HIN1-Like protein 3-like3.7e-2756.48Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSRE
        + I  I+ VG+ +L L L++ PN +KF+VT A+LT+F+ ++NQLH+ FALN+++RNPNKR  VYY T E   +YKN+RL  QWLPPF+Q  KTTAV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSRE

Query:  FEGQQLLL
        F GQQLLL
Subjt:  FEGQQLLL

A0A6J1F4Y9 NDR1/HIN1-like protein 107.4e-2863.3Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R
        V+IGFIV VGI+LL LGLVY P+ L+F+VT A+LT+F+   NQL+Y   LN++I NPNKRYRVYY T E+ VLYKN+RL++  LP FFQDTK+TAV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R

Query:  EFEGQQLLL
         FEGQ+L+L
Subjt:  EFEGQQLLL

A0A6J1J6T7 NDR1/HIN1-like protein 104.8e-2761.47Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R
        V+IGFIV VGI+LL LG+VY P+ L+F+VT A+LT+F+   NQL+Y   LN++IRNPN RYRVYY T E+ VLYKN+RL++  LP FFQDTK++AV+S  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS-R

Query:  EFEGQQLLL
        +FEGQ+L+L
Subjt:  EFEGQQLLL

SwissProt top hitse value%identityAlignment
Q9C615 Putative syntaxin-242.1e-1140.43Show/hide
Query:  NNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSREFEGQQLLLPSSSPRK
        N++KF V  A+LT FD   NN L Y  +LN+SIRN      ++Y  +E  V Y N+RL    +P F+  +K T ++   FEGQ L+L   + RK
Subjt:  NNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSREFEGQQLLLPSSSPRK

Q9FNH6 NDR1/HIN1-like protein 31.7e-1341.03Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRL-HNQWLPPFFQDTKTTAVVS
        + I   V +GI  L + L++ PN +KFHVT A+LT F     N L Y   LN +IRNPN+R  VYY   EV   Y ++R   +  +  F+Q  K T VV 
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRL-HNQWLPPFFQDTKTTAVVS

Query:  REFEGQQLLLPSSSPRK
         +  GQQL+L     RK
Subjt:  REFEGQQLLLPSSSPRK

Q9SJ52 NDR1/HIN1-like protein 109.7e-1739.67Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYV--NNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS
        V I  IV +G+  L   L+  P  +KFHVT A LTRFD+   +N L Y  AL + +RNPNKR  +YY   E    Y+ KR     L PF+Q  K T V++
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYV--NNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS

Query:  REFEGQQLLLPSSSPRKLLTS
          F+GQ L++ ++   + L +
Subjt:  REFEGQQLLLPSSSPRKLLTS

Q9SRN1 NDR1/HIN1-like protein 21.5e-1438.26Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSR
        + I   V +G+  L L L++ PN +KF+V  A L RF +  NN LHY   LN +IRNPN+R  VYY  + V   Y ++R  +  +  F+Q  K T V+  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSR

Query:  EFEGQQLLLPSSSPR
        + EGQ L++     R
Subjt:  EFEGQQLLLPSSSPR

Arabidopsis top hitse value%identityAlignment
AT1G32270.1 syntaxin, putative1.5e-1240.43Show/hide
Query:  NNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSREFEGQQLLLPSSSPRK
        N++KF V  A+LT FD   NN L Y  +LN+SIRN      ++Y  +E  V Y N+RL    +P F+  +K T ++   FEGQ L+L   + RK
Subjt:  NNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSREFEGQQLLLPSSSPRK

AT2G35460.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family2.2e-1639.32Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY--VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS
        + IG +V +G++ L L  +  PN +KF VT A LTRF++   ++ LHY  +LN SIRNPN+R  ++Y   EV   Y ++R     +  F+Q  K T VV 
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY--VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS

Query:  REFEGQQLLLPSSSPRK
         E  GQ+L+L  +  R+
Subjt:  REFEGQQLLLPSSSPRK

AT2G35980.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family6.9e-1839.67Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYV--NNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS
        V I  IV +G+  L   L+  P  +KFHVT A LTRFD+   +N L Y  AL + +RNPNKR  +YY   E    Y+ KR     L PF+Q  K T V++
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYV--NNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVS

Query:  REFEGQQLLLPSSSPRKLLTS
          F+GQ L++ ++   + L +
Subjt:  REFEGQQLLLPSSSPRKLLTS

AT3G11650.1 NDR1/HIN1-like 21.1e-1538.26Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSR
        + I   V +G+  L L L++ PN +KF+V  A L RF +  NN LHY   LN +IRNPN+R  VYY  + V   Y ++R  +  +  F+Q  K T V+  
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSR

Query:  EFEGQQLLLPSSSPR
        + EGQ L++     R
Subjt:  EFEGQQLLLPSSSPR

AT5G06320.1 NDR1/HIN1-like 31.2e-1441.03Show/hide
Query:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRL-HNQWLPPFFQDTKTTAVVS
        + I   V +GI  L + L++ PN +KFHVT A+LT F     N L Y   LN +IRNPN+R  VYY   EV   Y ++R   +  +  F+Q  K T VV 
Subjt:  VSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDY-VNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRL-HNQWLPPFFQDTKTTAVVS

Query:  REFEGQQLLLPSSSPRK
         +  GQQL+L     RK
Subjt:  REFEGQQLLLPSSSPRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTATCAATTGGTTTCATCGTGGCGGTTGGCATTTTATTATTGACATTAGGGCTTGTTTACGCTCCAAATAATCTAAAATTCCACGTCACGGGTGCCCAACTTAC
CCGGTTCGATTACGTGAACAATCAGCTCCATTACGAATTCGCTCTCAACATATCCATTAGAAACCCCAACAAGCGCTACCGAGTTTACTATGGCACTTATGAAGTTGATG
TTCTTTACAAAAACAAGAGGCTTCACAACCAGTGGCTGCCGCCATTCTTTCAAGACACCAAGACCACCGCGGTCGTCAGCCGGGAGTTCGAGGGCCAGCAGCTGCTGCTT
CCAAGTTCATCGCCTAGAAAGCTGCTGACGTCTACCATGTGGATGTCAAGATGTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGTATCAATTGGTTTCATCGTGGCGGTTGGCATTTTATTATTGACATTAGGGCTTGTTTACGCTCCAAATAATCTAAAATTCCACGTCACGGGTGCCCAACTTAC
CCGGTTCGATTACGTGAACAATCAGCTCCATTACGAATTCGCTCTCAACATATCCATTAGAAACCCCAACAAGCGCTACCGAGTTTACTATGGCACTTATGAAGTTGATG
TTCTTTACAAAAACAAGAGGCTTCACAACCAGTGGCTGCCGCCATTCTTTCAAGACACCAAGACCACCGCGGTCGTCAGCCGGGAGTTCGAGGGCCAGCAGCTGCTGCTT
CCAAGTTCATCGCCTAGAAAGCTGCTGACGTCTACCATGTGGATGTCAAGATGTTTATAA
Protein sequenceShow/hide protein sequence
MVVSIGFIVAVGILLLTLGLVYAPNNLKFHVTGAQLTRFDYVNNQLHYEFALNISIRNPNKRYRVYYGTYEVDVLYKNKRLHNQWLPPFFQDTKTTAVVSREFEGQQLLL
PSSSPRKLLTSTMWMSRCL