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Lsi03G018450 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G018450
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionThioredoxin-dependent peroxiredoxin
Genome locationchr03:29897563..29899633
RNA-Seq ExpressionLsi03G018450
SyntenyLsi03G018450
Gene Ontology termsGO:0098869 - cellular oxidant detoxification (biological process)
GO:0051920 - peroxiredoxin activity (molecular function)
InterPro domainsIPR034904 - Fe-S cluster assembly domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136506.1 uncharacterized protein LOC101205788 [Cucumis sativus]7.6e-6183.33Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESN
        MRLQAP+LR  IVS+ S   IAATF+TAPPPIS FR P    SL+LR RT R +F VSAT VPDQRPLDLTEENVRQALGEARVELAQIFD SVGIT   
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESN

Query:  SGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
         GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
Subjt:  SGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
XP_008442900.1 PREDICTED: uncharacterized protein LOC103486663 [Cucumis melo]1.2e-6183.95Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESN
        MRLQAP+LRH IVS  S S  AATFFTAPPPIS FRPP    SLRL  RT R +  VSAT VPDQRPLDLTEENV+QALGEARVELAQIFD SVGIT   
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESN

Query:  SGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
         GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
Subjt:  SGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
XP_022983136.1 uncharacterized protein LOC111481776 [Cucurbita maxima]2.0e-5375Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLR-LRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITE
        MRLQ  +LRH I  S SPS + ATFFT+ PPIS     R   P+L  L   +RR +  VSATAVPD RPLDLTE+NVRQALG+AR ELAQIFD SVGIT 
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLR-LRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITE

Query:  SNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
           GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIPEILEVEIEDESQLDDSPASF
Subjt:  SNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
XP_038903951.1 uncharacterized protein LOC120090394 isoform X1 [Benincasa hispida]7.9e-6684.71Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTR------RGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGI
        MRLQAP+LRH IVSS SPSPIAATFFT+ P ISTFRPPH SLR RFRTR      R R TVSATAVPDQRPLDLTEENVRQALGE RVELAQIFDGSVGI
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTR------RGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGI

Query:  TESNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIP----EILEVEIEDESQLDDSPASF
        T    GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIP    EILEVEIEDESQLDDSPASF
Subjt:  TESNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIP----EILEVEIEDESQLDDSPASF
XP_038903952.1 uncharacterized protein LOC120090394 isoform X2 [Benincasa hispida]1.4e-6786.75Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTR------RGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGI
        MRLQAP+LRH IVSS SPSPIAATFFT+ P ISTFRPPH SLR RFRTR      R R TVSATAVPDQRPLDLTEENVRQALGE RVELAQIFDGSVGI
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTR------RGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGI

Query:  TESNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        T    GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIPEILEVEIEDESQLDDSPASF
Subjt:  TESNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
TrEMBL top hitse value%identityAlignment
A0A0A0LGR7 Uncharacterized protein3.7e-6183.33Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESN
        MRLQAP+LR  IVS+ S   IAATF+TAPPPIS FR P    SL+LR RT R +F VSAT VPDQRPLDLTEENVRQALGEARVELAQIFD SVGIT   
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESN

Query:  SGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
         GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
Subjt:  SGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
A0A1S3B7J1 uncharacterized protein LOC1034866635.7e-6283.95Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESN
        MRLQAP+LRH IVS  S S  AATFFTAPPPIS FRPP    SLRL  RT R +  VSAT VPDQRPLDLTEENV+QALGEARVELAQIFD SVGIT   
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPH--PSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESN

Query:  SGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
         GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
Subjt:  SGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
A0A6J1CS17 uncharacterized protein LOC1110142311.8e-4766.47Show/hide
Query:  MRLQAPYLRHIIVSSS-------SPSPIAATFFTAPPPISTFRPPHPSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVG
        MR  AP+  H  ++SS       +P+P+A   F  PP  S  R P P+   R  +RR + +V A AVP+QRPLDLTEENV +AL +AR+ELAQIFD SVG
Subjt:  MRLQAPYLRHIIVSSS-------SPSPIAATFFTAPPPISTFRPPHPSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVG

Query:  ITESNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
        IT    GVVELAELDGPFVKISL+GRFWHKRSTVVARVGNYLKNRIPEILEVEIE+ESQLDDSPASF
Subjt:  ITESNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
A0A6J1F3P2 uncharacterized protein LOC1114418372.4e-5273.78Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLRL-RFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITE
        MRLQ  +LRH I  S SPS + ATFFT+ PPIS     R   P L L    +RR +  VSATA PD RPLDLTE+NVRQAL +AR ELAQIFD SVGIT 
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLRL-RFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITE

Query:  SNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
           GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIPEILEVEIEDESQLDDSPASF
Subjt:  SNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
A0A6J1J196 uncharacterized protein LOC1114817769.8e-5475Show/hide
Query:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLR-LRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITE
        MRLQ  +LRH I  S SPS + ATFFT+ PPIS     R   P+L  L   +RR +  VSATAVPD RPLDLTE+NVRQALG+AR ELAQIFD SVGIT 
Subjt:  MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPIS---TFRPPHPSLR-LRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITE

Query:  SNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
           GVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLK RIPEILEVEIEDESQLDDSPASF
Subjt:  SNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G33180.1 unknown protein1.4e-3363.33Show/hide
Query:  SLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIP
        S + R RT      VS + V    PLDLTE+N+   L EAR+ELAQ+FD SVGIT    G VEL ELDGPFV ISL+G+FWH R+ V+AR+GNYLK RIP
Subjt:  SLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESNSGVVELAELDGPFVKISLKGRFWHKRSTVVARVGNYLKNRIP

Query:  EILEVEIEDESQLDDSPASF
        EILEV IEDE QLDDSPA+F
Subjt:  EILEVEIEDESQLDDSPASF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCTACAGGCGCCATATCTCCGCCACATCATCGTCTCATCTTCGTCTCCATCGCCAATAGCCGCCACCTTCTTCACCGCACCTCCTCCGATTTCGACCTTCCGACC
GCCGCATCCCAGTCTGCGATTGAGATTCAGGACGCGGAGAGGAAGATTCACCGTTTCGGCAACGGCAGTTCCAGATCAACGGCCGCTGGATCTGACGGAGGAGAACGTGA
GACAGGCACTCGGGGAAGCTCGTGTGGAGCTAGCGCAGATCTTCGATGGCTCCGTCGGCATTACAGAAAGCAATTCAGGAGTGGTGGAATTGGCAGAATTGGACGGACCA
TTTGTGAAAATTAGTCTGAAAGGTCGGTTTTGGCATAAACGTTCCACAGTTGTAGCTCGGGTGGGCAATTATTTGAAGAACAGAATCCCTGAGATTTTGGAGGTTGAAAT
AGAAGATGAGAGTCAATTGGATGATAGTCCTGCAAGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCTACAGGCGCCATATCTCCGCCACATCATCGTCTCATCTTCGTCTCCATCGCCAATAGCCGCCACCTTCTTCACCGCACCTCCTCCGATTTCGACCTTCCGACC
GCCGCATCCCAGTCTGCGATTGAGATTCAGGACGCGGAGAGGAAGATTCACCGTTTCGGCAACGGCAGTTCCAGATCAACGGCCGCTGGATCTGACGGAGGAGAACGTGA
GACAGGCACTCGGGGAAGCTCGTGTGGAGCTAGCGCAGATCTTCGATGGCTCCGTCGGCATTACAGAAAGCAATTCAGGAGTGGTGGAATTGGCAGAATTGGACGGACCA
TTTGTGAAAATTAGTCTGAAAGGTCGGTTTTGGCATAAACGTTCCACAGTTGTAGCTCGGGTGGGCAATTATTTGAAGAACAGAATCCCTGAGATTTTGGAGGTTGAAAT
AGAAGATGAGAGTCAATTGGATGATAGTCCTGCAAGCTTTTAATTAAAACCATTTCTCTATTGTAATTATCTACTTTTTGGCCAAAATTATGTAGATCCACAGAACCTAA
TTTGCCTAATTTGAATCAAACCCAGATAGAAATATCAGTATTATTCTTGATAACTTTTGTAATATAAAATTCCCTCAAAAGATCAAACATGTGATAACACTTCAATAGTC
AAAACACTACATAAATTTGGAT
Protein sequenceShow/hide protein sequence
MRLQAPYLRHIIVSSSSPSPIAATFFTAPPPISTFRPPHPSLRLRFRTRRGRFTVSATAVPDQRPLDLTEENVRQALGEARVELAQIFDGSVGITESNSGVVELAELDGP
FVKISLKGRFWHKRSTVVARVGNYLKNRIPEILEVEIEDESQLDDSPASF