CuGenDBv2

Gene ID	Lsi03G018980
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box domain-containing protein
Genome location	chr03:30356440..30357685
RNA-Seq Expression	Lsi03G018980
Synteny	Lsi03G018980
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR032675 - Leucine-rich repeat domain superfamily IPR036047 - F-box-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA8516711.1 hypothetical protein F0562_016783 [Nyssa sinensis]

1.2e-117

56.9

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        ME+LPVEVIGNILS L  ARD V+AS TCRKWREAW+NHLHSL+FNSNDWP   D  T  LE++ITQTI QTTGLQ LSI M DDVD FSA+ VI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         IN++                                        ISALDL+LLL  CPK+E LALIN +I MS  QT MELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
         SLKDI+ E     KFILE D+LE LH+K+C  ++FEL GKGTLR+LKIDD S   LDIGE T+NLE+VDV N  I+W KF+ MIS++SKL++LRLWG  
Subjt:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E VDL++IS+ FP LS+LSLCYD+R G   + LQ  FQ+ENV +LELGW+ IS LFS+WVA LLE+CP L+KL+I GVVSE  T EECQ LA+FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
        +S V+LMR+Y H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

XP_022132399.1 F-box/LRR-repeat protein At1g67190-like [Momordica charantia]

1.2e-117

55.48

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLI-
        MEHLPVEVIGNILS L+ ARDAVIAS TC+KWREAW+NHLH+L+F+S DWP   +  T  LE++ITQTI QTT LQNL+I M DDV+ FSA++V++WL+ 
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLI-

Query:  ------------------NII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                          NII                                        +S+LDL+LLL  CPKLEKLALI+P++ MS     ME+SS
Subjt:  ------------------NII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
        +SLKDI+VE     KF+LEADTLE++HLK+C L++FE+  KG LRVL+IDD S   LDIGE  +NLE+VDVCN  I+W KFY MISK+SKL+KLRLWG  
Subjt:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E VDL++I + FP+LS+LSLCYD++ G   H+LQ +  + NV +LELGWS ++  FS W+ KLL +CP LKKLIICGVVSE  THEECQTLA+FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
         S VQLMRKY H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

XP_022144792.1 F-box/LRR-repeat protein At1g67190-like [Momordica charantia]

5.0e-137

66.03

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDD--PMTLEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        MEHLPVEVIGNILSHLK ARD VIAS TC+KWREAW+NHLH+LTFNSNDWP P D    TLE+IITQTILQTTGLQNLS+FM DD DAFSASSVI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDD--PMTLEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         +NII                                        ISALDLNLLL ACPKLEKLALINPE+VMS  Q T+ELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVE---TQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
        SSLKD+FVE     KF L+AD LEILHL++C LD FEL GKG LRVLKIDD S   LDIGE T+NLEIVDVCN  I+W KFY  ISKAS LKKLRLWG A
Subjt:  SSLKDIFVE---TQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNED-VDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHF
        FDD +++ VDLD+ISISFPKLS+LSL YD++HG   HNLQ++ +MENVTILELGWS+I     NWV KL+E CPKLKKLII GVVSE  THEECQTLA F
Subjt:  FDDSNED-VDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHF

Query:  TTSFVQLMRKYQHIEVQFDFE
        TTSFVQLMRKY HIEVQFDFE
Subjt:  TTSFVQLMRKYQHIEVQFDFE

XP_022925792.1 F-box/LRR-repeat protein At1g67190-like [Cucurbita moschata]

4.0e-118

56.43

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLI-
        MEHLPVEVIGNILS L+ ARDAVIAS TC+KWREAW+NHLH+L+F+S+DWP   +  T  LE++ITQTI QTT LQ+L+I M D+VD FSA+ V++WL+ 
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLI-

Query:  ------------------NII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                          NII                                        +S LDL+LLL  CPKLEKLALI+P+I MS     ME+SS
Subjt:  ------------------NII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
        SSLKDI+VE     KFILEADTLE +HLK+C L++FE+  KG LRVL+IDD S   LDIGE T+NLE+VDVCN  I+W KFY MISK+SKL+KLRLWG  
Subjt:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E VDL++I + FP+LS+LSLCYD++ GT  H+LQ +  + NV +LELGWS +S  FS W+ KLL +CP LKKLIICGVVSE  THEECQTLA+FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
         S VQLMRKY H++VQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

XP_038883045.1 F-box/LRR-repeat protein At1g67190 [Benincasa hispida]

8.9e-118

56.19

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLI-
        MEHLPVEVIGNILS L+ ARDAVIASVTC+KWREAW+NHLH+L+F+S DWP   +  T  LE++ITQTI QTT LQ+L+I M D+VD FSA+ V++WL+ 
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLI-

Query:  ------------------NII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                          NII                                        +S LDL+LLL  CPKLEKLALI+P+I MS     ME+SS
Subjt:  ------------------NII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
        SSLKDI+VE     KFILEADTLE++HLK+C L++FE+  KG LRVL+IDD S   LDIGE  +NLE+VDVCN  I+W KFY MISK+SKL+KLRLWG  
Subjt:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E VDL++I + FP+LS+LSLCYD++ G   H+LQ +  + NV +LELGWS +S  FS W+ KLL +CP LKKLIICGVVSE  TH+ECQTLA+FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
         S VQLMRKY H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

TrEMBL top hits

e value

%identity

Alignment

A0A5B7APK3 F-box domain-containing protein

6.6e-119

58.1

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDD--PMTLEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        ME LPVEVIGNILS L  ARD VIAS TCRKWREAW+NHLH+L FNSNDWP   D     LE++ITQTI QTTGLQ LSI M DDVD FSA+ VI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDD--PMTLEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         INI+                                        ISALDL+LLL  CPK+E LALIN +I MS  QTTMELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
          LKDI+VE     KFILEAD+LE LHLK+C L+ FEL GKGTLR+LKIDD S   LDIGE T+NLE+VDV N  I+W KF+ MIS++SKL++LRLWG  
Subjt:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E VDL++IS+ FP LS+LSLCYD+R G   + LQ  FQ+ENV +LELGW+ IS LFS WVA LL++CP L+KL+I GVVSE  THEECQ LA+FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
        +S V+LMRKY H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

A0A5B7AR14 F-box domain-containing protein

1.1e-118

57.62

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        ME+LPVEVIGNILS L  ARD VIAS TCRKWREAW+NHLH+L+FNSNDWP   D  T  LE++ITQTI QT GLQ LSI M DDVD FSA+ VI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         INI+                                        ISA+DL+LLL  CPK+E LALIN +I MS  QTTMELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
          LKDI+VE     KFILEAD+LE LHLK+C L++FEL GKGTLR+LKIDD S   LDIGE T+NLE+VDV N  I+W KF+ MIS++SKL++LRLWG  
Subjt:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FD+ +E VDL+++S+ FP LS+LSLCYD+R G   + LQ  FQ+ENV +LELGW+ IS LFS WVA LLE+CP L KL+I GVVSE  THEECQ LA+FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
        +S V+LMRKY H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

A0A5J4ZHC5 F-box domain-containing protein

5.6e-118

56.9

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        ME+LPVEVIGNILS L  ARD V+AS TCRKWREAW+NHLHSL+FNSNDWP   D  T  LE++ITQTI QTTGLQ LSI M DDVD FSA+ VI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         IN++                                        ISALDL+LLL  CPK+E LALIN +I MS  QT MELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
         SLKDI+ E     KFILE D+LE LH+K+C  ++FEL GKGTLR+LKIDD S   LDIGE T+NLE+VDV N  I+W KF+ MIS++SKL++LRLWG  
Subjt:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E VDL++IS+ FP LS+LSLCYD+R G   + LQ  FQ+ENV +LELGW+ IS LFS+WVA LLE+CP L+KL+I GVVSE  T EECQ LA+FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
        +S V+LMR+Y H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

A0A6J1CTB9 F-box/LRR-repeat protein At1g67190-like

2.4e-137

66.03

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDD--PMTLEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        MEHLPVEVIGNILSHLK ARD VIAS TC+KWREAW+NHLH+LTFNSNDWP P D    TLE+IITQTILQTTGLQNLS+FM DD DAFSASSVI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDD--PMTLEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         +NII                                        ISALDLNLLL ACPKLEKLALINPE+VMS  Q T+ELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVE---TQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
        SSLKD+FVE     KF L+AD LEILHL++C LD FEL GKG LRVLKIDD S   LDIGE T+NLEIVDVCN  I+W KFY  ISKAS LKKLRLWG A
Subjt:  SSLKDIFVE---TQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNED-VDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHF
        FDD +++ VDLD+ISISFPKLS+LSL YD++HG   HNLQ++ +MENVTILELGWS+I     NWV KL+E CPKLKKLII GVVSE  THEECQTLA F
Subjt:  FDDSNED-VDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHF

Query:  TTSFVQLMRKYQHIEVQFDFE
        TTSFVQLMRKY HIEVQFDFE
Subjt:  TTSFVQLMRKYQHIEVQFDFE

A0A6J1ECL6 F-box/LRR-repeat protein At1g67190-like

1.9e-118

56.43

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLI-
        MEHLPVEVIGNILS L+ ARDAVIAS TC+KWREAW+NHLH+L+F+S+DWP   +  T  LE++ITQTI QTT LQ+L+I M D+VD FSA+ V++WL+ 
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLI-

Query:  ------------------NII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                          NII                                        +S LDL+LLL  CPKLEKLALI+P+I MS     ME+SS
Subjt:  ------------------NII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
        SSLKDI+VE     KFILEADTLE +HLK+C L++FE+  KG LRVL+IDD S   LDIGE T+NLE+VDVCN  I+W KFY MISK+SKL+KLRLWG  
Subjt:  SSLKDIFVET---QKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGE-TQNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E VDL++I + FP+LS+LSLCYD++ GT  H+LQ +  + NV +LELGWS +S  FS W+ KLL +CP LKKLIICGVVSE  THEECQTLA+FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
         S VQLMRKY H++VQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

SwissProt top hits

e value

%identity

Alignment

Q9ZW88 F-box/LRR-repeat protein At1g67190

2.2e-103

50.71

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        M++LPVEVIGNILS L  ARD VIAS TCRKWREA + HL +L+FNS DWP   D  T  LE++ITQTI QT GLQ LSI M DD + FSA++VI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         +NI+                                        ISALDLNLLL+ACP +E L L++ EI MS  Q T+ELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIF---VETQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
         +LK ++   +   KFILEAD++E LH+K+C L++FEL G GTL+  K+DD S   LDI ET ++LE+VDV +  +VW KFY MIS++ KLKKLRLW   
Subjt:  SSLKDIF---VETQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E +D++SI+  F  L++LSL YD++ G   ++LQ   Q+ENVT+LELGW+ I+ +FS WV +LL +CP LKKLII GVVSET T  +CQ LA FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
         S VQLMRKY H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

Arabidopsis top hits

e value

%identity

Alignment

AT1G67190.1 F-box/RNI-like superfamily protein

1.6e-104

50.71

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Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        M++LPVEVIGNILS L  ARD VIAS TCRKWREA + HL +L+FNS DWP   D  T  LE++ITQTI QT GLQ LSI M DD + FSA++VI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         +NI+                                        ISALDLNLLL+ACP +E L L++ EI MS  Q T+ELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIF---VETQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
         +LK ++   +   KFILEAD++E LH+K+C L++FEL G GTL+  K+DD S   LDI ET ++LE+VDV +  +VW KFY MIS++ KLKKLRLW   
Subjt:  SSLKDIF---VETQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E +D++SI+  F  L++LSL YD++ G   ++LQ   Q+ENVT+LELGW+ I+ +FS WV +LL +CP LKKLII GVVSET T  +CQ LA FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
         S VQLMRKY H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

AT1G67190.2 F-box/RNI-like superfamily protein

1.6e-104

50.71

Show/hide

Query:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--
        M++LPVEVIGNILS L  ARD VIAS TCRKWREA + HL +L+FNS DWP   D  T  LE++ITQTI QT GLQ LSI M DD + FSA++VI+WL  
Subjt:  MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMT--LEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWL--

Query:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS
                         +NI+                                        ISALDLNLLL+ACP +E L L++ EI MS  Q T+ELSS
Subjt:  -----------------INII----------------------------------------ISALDLNLLLAACPKLEKLALINPEIVMSHEQTTMELSS

Query:  SSLKDIF---VETQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA
         +LK ++   +   KFILEAD++E LH+K+C L++FEL G GTL+  K+DD S   LDI ET ++LE+VDV +  +VW KFY MIS++ KLKKLRLW   
Subjt:  SSLKDIF---VETQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGET-QNLEIVDVCNLAIVWQKFYPMISKASKLKKLRLWGAA

Query:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT
        FDD +E +D++SI+  F  L++LSL YD++ G   ++LQ   Q+ENVT+LELGW+ I+ +FS WV +LL +CP LKKLII GVVSET T  +CQ LA FT
Subjt:  FDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQTLAHFT

Query:  TSFVQLMRKYQHIEVQFDFE
         S VQLMRKY H+EVQF++E
Subjt:  TSFVQLMRKYQHIEVQFDFE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAACACTTGCCAGTTGAAGTTATTGGAAACATACTTTCTCATCTAAAATATGCTAGAGATGCGGTGATTGCTTCAGTTACTTGTAGGAAATGGAGAGAGGCTTGGCA
GAATCACCTCCATTCTTTGACCTTCAACTCGAATGATTGGCCTGATCCTGATGACCCAATGACCTTGGAAGTTATAATAACACAAACAATACTTCAGACCACTGGACTTC
AGAACTTGTCCATTTTCATGGATGATGATGTAGATGCATTCTCGGCTTCCTCAGTGATTTCTTGGCTCATTAATATCATCATATCTGCATTAGATTTGAACCTTCTTCTC
GCAGCTTGTCCGAAGCTTGAAAAGTTAGCTCTAATCAACCCGGAAATTGTGATGTCACATGAGCAGACAACAATGGAACTTAGCAGTTCTTCATTGAAGGATATCTTTGT
TGAAACCCAGAAGTTCATATTAGAGGCTGATACCCTTGAAATTTTACATTTAAAAGAATGTGCTCTGGATATCTTTGAGCTAAATGGCAAAGGAACTCTAAGAGTCCTGA
AGATCGACGATTTTAGTGGTTTCCAACTGGATATAGGCGAGACTCAAAATCTTGAAATTGTGGACGTTTGCAATCTTGCTATAGTGTGGCAGAAATTCTATCCTATGATC
TCAAAGGCATCAAAGTTGAAGAAGCTTCGGCTATGGGGTGCAGCATTTGATGATAGTAATGAAGATGTGGATTTGGACTCAATTTCCATCTCTTTCCCCAAGTTAAGCTA
TTTATCTTTGTGTTATGATATAAGACATGGAACCTTTGATCATAACTTGCAGAAAGCGTTTCAGATGGAGAATGTGACCATACTAGAACTTGGATGGAGTGAGATTAGTT
ATCTCTTCTCTAACTGGGTGGCGAAGCTCCTTGAAAAATGTCCTAAGTTGAAGAAATTGATAATTTGTGGGGTTGTATCAGAGACTAATACCCACGAGGAATGCCAAACT
TTAGCACACTTTACCACATCTTTCGTTCAACTTATGAGAAAATATCAGCATATTGAGGTCCAGTTTGATTTTGAATAG

mRNA sequence

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Protein sequence

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MEHLPVEVIGNILSHLKYARDAVIASVTCRKWREAWQNHLHSLTFNSNDWPDPDDPMTLEVIITQTILQTTGLQNLSIFMDDDVDAFSASSVISWLINIIISALDLNLLL
AACPKLEKLALINPEIVMSHEQTTMELSSSSLKDIFVETQKFILEADTLEILHLKECALDIFELNGKGTLRVLKIDDFSGFQLDIGETQNLEIVDVCNLAIVWQKFYPMI
SKASKLKKLRLWGAAFDDSNEDVDLDSISISFPKLSYLSLCYDIRHGTFDHNLQKAFQMENVTILELGWSEISYLFSNWVAKLLEKCPKLKKLIICGVVSETNTHEECQT
LAHFTTSFVQLMRKYQHIEVQFDFE

Lsi03G018980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome