; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G019350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G019350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPhytosulfokine-beta
Genome locationchr03:30776646..30777409
RNA-Seq ExpressionLsi03G019350
SyntenyLsi03G019350
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:0008283 - cell population proliferation (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR009438 - Phytosulfokine


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580671.1 hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sororia]4.8e-3281Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHGFFFFFFF SFLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQA+SWPDFPHI+GGREKG     EEEEE WEKRKMMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN

XP_022935155.1 uncharacterized protein LOC111442110 [Cucurbita moschata]2.8e-3280.39Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHGFFFFFFF SFLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQA+SWPDFPHI+GGREKG     EEEEE WEKRKMMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN

Query:  EK
         K
Subjt:  EK

XP_022983167.1 uncharacterized protein LOC111481800 [Cucurbita maxima]3.1e-3178.43Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHGFFFFFF  SFLFIFLLF S S SARFP +KQG+ ETH+KL+HG+VQA+SW DFPHI+GGREKG    EEEEEE WEKRKMMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN

Query:  EK
         K
Subjt:  EK

XP_023528216.1 putative phytosulfokines 6 [Cucurbita pepo subsp. pepo]1.8e-3178.43Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHGFFFFFFF SFLFIFLLF S SASARFP +KQG+ ETH+KL+HG+VQA+SW DFPH++GGREKG     EEEEE WEKRKMMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN

Query:  EK
         K
Subjt:  EK

XP_038906014.1 uncharacterized protein LOC120091917 [Benincasa hispida]9.7e-4187.96Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREK-----GEEEEEEEEEEEWEKRKMMLEAHLDY
        MNQNSHG FFFFFF+SFLFIFLLFSSHSASARFP SKQGIEETHKK+SHGMVQA+SWPDFPHIMGGREK     G  EEEEEEEEEWEK KMMLEAHLDY
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREK-----GEEEEEEEEEEEWEKRKMMLEAHLDY

Query:  VYTQNEKP
        VYTQNEKP
Subjt:  VYTQNEKP

TrEMBL top hitse value%identityAlignment
A0A1S4DUI1 Phytosulfokine-beta2.8e-3075.93Show/hide
Query:  NQNSHG----FFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHG-MVQA-ESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDY
        N+NSHG    FFFFFFFISFLFI LLFSSHSASARFPPSK GIEETHKK+S+G MVQ+ +SWPDFPH+     K E++EEE EEEE EKRKMMLEAHLDY
Subjt:  NQNSHG----FFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHG-MVQA-ESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDY

Query:  VYTQNEKP
        VYTQ+E P
Subjt:  VYTQNEKP

A0A6J1F9T2 Phytosulfokine-beta1.4e-3280.39Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHGFFFFFFF SFLFIFLLF S SASARFP +KQG+ ETH+KL+HG VQA+SWPDFPHI+GGREKG     EEEEE WEKRKMMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN

Query:  EK
         K
Subjt:  EK

A0A6J1FSF0 Phytosulfokine-beta5.2e-2463.11Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHG FF F          L  S SA+ARF P+KQG EETH KLSHGM+Q +SWPDFP I+          EEEE+EEWEKR+MMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN

Query:  EKP
        EKP
Subjt:  EKP

A0A6J1IYI6 Phytosulfokine-beta1.5e-3178.43Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHGFFFFFF  SFLFIFLLF S S SARFP +KQG+ ETH+KL+HG+VQA+SW DFPHI+GGREKG    EEEEEE WEKRKMMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN

Query:  EK
         K
Subjt:  EK

A0A6J1KTY7 Phytosulfokine-beta1.5e-2669.9Show/hide
Query:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN
        MNQ+SHGF  FF+F    FIFLL  S SA+ARF P+KQG EETH KLSHGM+QA+SWPDFP I+         EEEEE+EEWEKR+MMLEAHLDYVYTQN
Subjt:  MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQN

Query:  EKP
        EKP
Subjt:  EKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTCTTCTTCATCTCTTTTCTTTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGCTCGTTTCCCACCATCCAA
ACAAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGAGTCATGGCCAGATTTCCCCCATATAATGGGAGGAAGAGAGAAGGGAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCGCACTTGGATTATGTTTACACACAAAATGAGAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
CTCCACTCCCACTGGACCTATTCCCCTGTTTTTCTTCTAATAATCATTTCTCTCATTCTCACTCCAAAAAACACAATTAAGAGACAGAGAAAAAATGAACCAGAATTCCC
ATGGCTTCTTCTTCTTCTTCTTCTTCATCTCTTTTCTTTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGCTCGTTTCCCACCATCCAAACAAGGTATAGAAGAA
ACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGAGTCATGGCCAGATTTCCCCCATATAATGGGAGGAAGAGAGAAGGGAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCGCACTTGGATTATGTTTACACACAAAATGAGAAGCCTTGAATCAAATTGAATTTTCAAAGATATGTTTTATGTA
CATATCCAAATACTAAAAGAATTGTTGCTGTTTTCATCATTTTATCATATGATACATAGTTTTATATTGTTTACATGGTTTTTTTTTTATATATATTATTAATTTCTTCT
CCC
Protein sequenceShow/hide protein sequence
MNQNSHGFFFFFFFISFLFIFLLFSSHSASARFPPSKQGIEETHKKLSHGMVQAESWPDFPHIMGGREKGEEEEEEEEEEEWEKRKMMLEAHLDYVYTQNEKP