; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G019640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G019640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPLATZ transcription factor family protein
Genome locationchr03:31051684..31052787
RNA-Seq ExpressionLsi03G019640
SyntenyLsi03G019640
Gene Ontology termsNA
InterPro domainsIPR006734 - PLATZ transcription factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442761.1 PREDICTED: uncharacterized protein LOC103486541 isoform X1 [Cucumis melo]1.1e-7499.26Show/hide
Query:  QKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLN
        QKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLN
Subjt:  QKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLN

Query:  ERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        ERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  ERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

XP_008442762.1 PREDICTED: uncharacterized protein LOC103486541 isoform X2 [Cucumis melo]4.1e-7499.25Show/hide
Query:  KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE
        KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE
Subjt:  KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE

Query:  RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

XP_022144595.1 uncharacterized protein LOC111014242 isoform X1 [Momordica charantia]7.0e-7495.65Show/hide
Query:  MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVM
        MMKQKS+MSAPPWLEPLL T FFSICHTHGDAARSERNMYCLDCH+DAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIED+LDISGVQTYVINSARVM
Subjt:  MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

XP_038903534.1 uncharacterized protein LOC120090101 isoform X1 [Benincasa hispida]2.6e-7699.28Show/hide
Query:  MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVM
        MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVM
Subjt:  MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

XP_038903535.1 uncharacterized protein LOC120090101 isoform X2 [Benincasa hispida]9.8e-7699.27Show/hide
Query:  MKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMF
        MKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMF
Subjt:  MKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMF

Query:  LNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        LNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  LNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

TrEMBL top hitse value%identityAlignment
A0A0A0LDT6 Uncharacterized protein4.4e-7498.51Show/hide
Query:  KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE
        KSVMSAPPWLEPLLTTPFFSICHTHGD+ARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE
Subjt:  KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE

Query:  RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

A0A1S3B5Z6 uncharacterized protein LOC103486541 isoform X22.0e-7499.25Show/hide
Query:  KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE
        KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE
Subjt:  KSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNE

Query:  RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  RPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

A0A1S3B782 uncharacterized protein LOC103486541 isoform X15.2e-7599.26Show/hide
Query:  QKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLN
        QKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLN
Subjt:  QKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLN

Query:  ERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        ERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  ERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

A0A6J1CS33 uncharacterized protein LOC111014242 isoform X13.4e-7495.65Show/hide
Query:  MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVM
        MMKQKS+MSAPPWLEPLL T FFSICHTHGDAARSERNMYCLDCH+DAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIED+LDISGVQTYVINSARVM
Subjt:  MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVM

Query:  FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  FLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

A0A6J1CU41 uncharacterized protein LOC111014242 isoform X21.3e-7395.62Show/hide
Query:  MKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMF
        MKQKS+MSAPPWLEPLL T FFSICHTHGDAARSERNMYCLDCH+DAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIED+LDISGVQTYVINSARVMF
Subjt:  MKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMF

Query:  LNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        LNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCK+
Subjt:  LNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKV

SwissProt top hitse value%identityAlignment
Q1G3Q4 Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 11.0e-2746.09Show/hide
Query:  PPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKA
        P WL+ L    FF  C  H  A ++ERN+ CLDC   + C +C  S H  H+++Q+RR  YHDVVR+ +++  +D S VQ Y INSA+V+F+ +RPQ + 
Subjt:  PPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKA

Query:  GKGGAHICEICGRSLLDPFRFCSLGCKV
         KG  + C  C RSL +P+  CSLGCKV
Subjt:  GKGGAHICEICGRSLLDPFRFCSLGCKV

Arabidopsis top hitse value%identityAlignment
AT1G21000.1 PLATZ transcription factor family protein1.4e-4360Show/hide
Query:  SAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQP
        ++PPWL P+L   +F  C  H D+ ++E N++CLDC  +AFC YC    H DH+V+QIRRSSYH+VVRV EI+  +DI+ VQTY+INSA+++FLNERPQP
Subjt:  SAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQP

Query:  KAGKGGAHICEICGRSLLDPFRFCSLGCKV
        + GKG  + CEIC RSLLD FRFCSLGCK+
Subjt:  KAGKGGAHICEICGRSLLDPFRFCSLGCKV

AT1G32700.1 PLATZ transcription factor family protein7.3e-4564.34Show/hide
Query:  PPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKA
        P WL+PLL   FF  C  H D+ +SE NMYCLDC +   C  C  S H DH  IQIRRSSYHDV+RV+EI+  LDI+GVQTYVINSA+V+FLNERPQP+ 
Subjt:  PPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKA

Query:  GKGGAHICEICGRSLLDPFRFCSLGCKVS
        GKG  + CE+C RSL+D FRFCSLGCK+S
Subjt:  GKGGAHICEICGRSLLDPFRFCSLGCKVS

AT1G76590.1 PLATZ transcription factor family protein7.3e-4562.6Show/hide
Query:  MSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQ
        ++ PPWL P+L   +F  C  H  + +SE NM+CLDC S+AFC YC  +H N H+V+QIRRSSYH+VVRV EI+  +DIS VQTY+INSAR++FLNERPQ
Subjt:  MSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQ

Query:  PKAGKGGAHICEICGRSLLDPFRFCSLGCKV
        P+ GKG  + CEIC RSLLD FRFCSLGCK+
Subjt:  PKAGKGGAHICEICGRSLLDPFRFCSLGCKV

AT2G27930.1 PLATZ transcription factor family protein5.7e-5067.86Show/hide
Query:  MSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQ
        M  P WLE LL T FFSIC  H +  R+E NM+CL C + AFCFYCRSS H DH V+QIRRSSYHDVVRV+EIE+ALDI GVQTYVINSARV+FLNERPQ
Subjt:  MSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQ

Query:  PKAGKGGA---------HICEICGRSLLDPFRFCSLGCKV
        PK    GA         + CE C R+LLDPFRFCSLGCKV
Subjt:  PKAGKGGA---------HICEICGRSLLDPFRFCSLGCKV

AT4G17900.1 PLATZ transcription factor family protein1.2e-4463.08Show/hide
Query:  PPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKA
        PPWL+PLL   FF  C  HGD+ +SE NMYCLDC +   C  C  +HH DH+ IQIRRSSYHDV+RV EI+  LDI G+QTYVINSA+V+FLNERPQP+ 
Subjt:  PPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKA

Query:  GKGGAHICEICGRSLL-DPFRFCSLGCKVS
        GKG  + C++C RSL+ D FRFCSLGCK++
Subjt:  GKGGAHICEICGRSLL-DPFRFCSLGCKVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAGCAAAAATCAGTAATGTCGGCGCCGCCGTGGCTTGAGCCATTACTGACAACGCCGTTCTTCTCAATCTGCCACACGCACGGCGATGCCGCCAGAAGCGAGCG
CAATATGTATTGTCTTGATTGCCATTCTGACGCATTTTGCTTTTACTGCCGCTCATCACACCACAACGACCATCAAGTCATTCAGATAAGGAGATCTTCATATCATGATG
TGGTGAGAGTTGCAGAAATTGAAGATGCTTTGGATATAAGTGGAGTACAAACATATGTGATTAATAGTGCTAGAGTAATGTTTTTGAATGAAAGACCTCAGCCAAAAGCT
GGTAAAGGAGGAGCTCATATTTGTGAAATTTGTGGAAGAAGCTTATTGGATCCTTTTCGTTTCTGTTCACTTGGCTGTAAGGTTAGCATTTCTCTCTAA
mRNA sequenceShow/hide mRNA sequence
TAAGCGCCAAACTTTGCCATCTCTGTCAATTCCATCTAACGGTTGTGATTACTCCTGTGCCACCAAATCCCATCTCCACCGTCCACTACATAATTAACCTTGTCCCTTCA
GTCTTGGCCTATTCAATTTTGTTCCAATTCTCTCACAAATTGGCATCTCTTTCTTCTTTCTTCTTTCTTCTTTCTCTCTCTCATTTCTCTCGTGAGAGAGTTATGATAAT
AAGGCAAAAGATCACATTGTTTCCGATTCCCACTTTCATTTTCGCACATTGAGCTTCCTCAAAGGAATATAATTTATAATGATGAAGCAAAAATCAGTAATGTCGGCGCC
GCCGTGGCTTGAGCCATTACTGACAACGCCGTTCTTCTCAATCTGCCACACGCACGGCGATGCCGCCAGAAGCGAGCGCAATATGTATTGTCTTGATTGCCATTCTGACG
CATTTTGCTTTTACTGCCGCTCATCACACCACAACGACCATCAAGTCATTCAGATAAGGAGATCTTCATATCATGATGTGGTGAGAGTTGCAGAAATTGAAGATGCTTTG
GATATAAGTGGAGTACAAACATATGTGATTAATAGTGCTAGAGTAATGTTTTTGAATGAAAGACCTCAGCCAAAAGCTGGTAAAGGAGGAGCTCATATTTGTGAAATTTG
TGGAAGAAGCTTATTGGATCCTTTTCGTTTCTGTTCACTTGGCTGTAAGGTTAGCATTTCTCTCTAATTTTTATTTTTTTTAAAAAAATTGTTTGGTTCTTCATTACCAT
CATCATCATTCATAATTCATGATAAGTTAGTGACCCATCACTCACACATCATCACCCA
Protein sequenceShow/hide protein sequence
MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHNDHQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKA
GKGGAHICEICGRSLLDPFRFCSLGCKVSISL