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Lsi03G019910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G019910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCarbonic anhydrase
Genome locationchr03:31292338..31301835
RNA-Seq ExpressionLsi03G019910
SyntenyLsi03G019910
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0004089 - carbonate dehydratase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001148 - Alpha carbonic anhydrase domain
IPR023561 - Carbonic anhydrase, alpha-class
IPR036398 - Alpha carbonic anhydrase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442725.1 PREDICTED: alpha carbonic anhydrase 7-like [Cucumis melo]9.8e-3955.43Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        VKWE +AGS+EINGT+YLLQQAHWHSPSEHTLNGR           SSNPNAKYPIAVVG FYKIGRPDSFLS                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   KIGTVS +QVKLLRSAVHDSAEKNARP+QPHNGR V LYDPNPT   N
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

XP_011652844.2 alpha carbonic anhydrase 7 [Cucumis sativus]6.2e-4156.57Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        VKWE +AGS+EINGTDYLLQQAHWHSPSEHTLNGR           SSNPNAKYPIAVVG FYKIGRPDSFLS                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   KIGTVSR+QVKLLRSAVHDSAEKNARP+QPHNGR +DLYDPNPT   N
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

XP_022144728.1 alpha carbonic anhydrase 7-like [Momordica charantia]2.9e-3853.71Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        +KWEGNAGS++IN T+YLLQQ HWHSPSEHTLNGR           SS+ + KYPIAVVGIFYK+GRPD FLS                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   KIGTVSREQVKLLRSAVHDSAEKNARP+QP NGRQVDLYDPNPT  PN
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

XP_023527587.1 alpha carbonic anhydrase 7-like [Cucurbita pepo subsp. pepo]8.3e-3852.57Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFL----------------------------
        +KWEG+AGS+EINGT+Y+LQQAHWHS SEHTLNGR           SSNP+AKYPIAVVG+FYKIGRPD+FL                            
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFL----------------------------

Query:  --------------------------SKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   K+ TVSREQV LLRSAVHDSAE+NARP+QPHNGR VDLYDPNPT I N
Subjt:  --------------------------SKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

XP_038905903.1 alpha carbonic anhydrase 7-like [Benincasa hispida]6.6e-4358.86Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        VKWE NAG +EINGTDYLLQQAHWHSPSEHTLNGR           SSNPNAKYPIAVVGIFY IGRPDSFLS                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   KIGTVSREQVKLLRSAVHDSAEKNARP+QPHNGRQVDLY+PNPTQ PN
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

TrEMBL top hitse value%identityAlignment
A0A0A0LAM4 Carbonic anhydrase3.0e-4156.57Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        VKWE +AGS+EINGTDYLLQQAHWHSPSEHTLNGR           SSNPNAKYPIAVVG FYKIGRPDSFLS                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   KIGTVSR+QVKLLRSAVHDSAEKNARP+QPHNGR +DLYDPNPT   N
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

A0A1S3B5W3 Carbonic anhydrase4.8e-3955.43Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        VKWE +AGS+EINGT+YLLQQAHWHSPSEHTLNGR           SSNPNAKYPIAVVG FYKIGRPDSFLS                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   KIGTVS +QVKLLRSAVHDSAEKNARP+QPHNGR V LYDPNPT   N
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

A0A5A7TM78 Carbonic anhydrase4.8e-3955.43Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        VKWE +AGS+EINGT+YLLQQAHWHSPSEHTLNGR           SSNPNAKYPIAVVG FYKIGRPDSFLS                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   KIGTVS +QVKLLRSAVHDSAEKNARP+QPHNGR V LYDPNPT   N
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

A0A6J1CU30 Carbonic anhydrase1.4e-3853.71Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        +KWEGNAGS++IN T+YLLQQ HWHSPSEHTLNGR           SS+ + KYPIAVVGIFYK+GRPD FLS                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   KIGTVSREQVKLLRSAVHDSAEKNARP+QP NGRQVDLYDPNPT  PN
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

A0A6J1J682 Carbonic anhydrase4.0e-3852.57Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------
        +KWEG+AGS+EINGT+Y+LQQAHWHS SEHTLNGR           SSNP+ KYPIAVVG+FYKIGRPDSFL+                           
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-----------SSNPNAKYPIAVVGIFYKIGRPDSFLS---------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN
                                   K+ TVSREQ+ LLRSAVHDSAE+NARP+QPHNGRQVDLYDPNPT I N
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQIPN

SwissProt top hitse value%identityAlignment
F4HUC4 Alpha carbonic anhydrase 55.6e-1333.13Show/hide
Query:  GNAG-SMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFL-----------------------------------
        GNAG  + INGT+Y LQQ HWHSPSEHTLNG+         + +     AVV  FYK+G+PD FL                                   
Subjt:  GNAG-SMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFL-----------------------------------

Query:  ---------------------SKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDP
                              ++ TV+ +Q+ +LR  VHD +  NARP+Q  N R V LY P
Subjt:  ---------------------SKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDP

F4JIK2 Alpha carbonic anhydrase 41.7e-1733.54Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNG-------RSSNPNAKYPIAVVGIFYKIGRPDSFLSK------------------------------
        V W+G+AG M I  TD+ L Q HWHSPSEHT+NG          + +A+   AV+G+ YK+G P+ FL+K                              
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNG-------RSSNPNAKYPIAVVGIFYKIGRPDSFLSK------------------------------

Query:  -----------------------IGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPN
                               + T+S EQ+  LR AV D  E N+RPVQ   GR V  YDPN
Subjt:  -----------------------IGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPN

Q8L817 Alpha carbonic anhydrase 71.2e-1836.75Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFL--------------------------------
        +K+E  AG+++ING +Y LQQ HWHSPSEHT+NGR         +      +AVV + YKIGR D+F+                                
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFL--------------------------------

Query:  ------------------------SKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDP
                                 K+ TV+R+QVKLLR AVHD A  NARPVQP N R V LY P
Subjt:  ------------------------SKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDP

Q9FYE3 Alpha carbonic anhydrase 35.4e-1632.18Show/hide
Query:  MRVKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFLS-----------------------------
        M+VKWE +AG + IN TDY L Q+HWH+PSEH L+G+         + + +  +AV+G+ ++ G P++F+S                             
Subjt:  MRVKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFLS-----------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYD---PNPT
                                   K+GTVSREQ+ +L  A     EKNARP QP NGR V L +   P+PT
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYD---PNPT

Q9SUB4 Alpha carbonic anhydrase 63.3e-1349.3Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGRS-------SNPNAKYPIAVVGIFYKIGRPDSFLSKI
        V W+G+ G + I+ TDY L Q HWHSPSEHT+NG S        + +A     VVG+ YK+G PD FL+KI
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGRS-------SNPNAKYPIAVVGIFYKIGRPDSFLSKI

Arabidopsis top hitse value%identityAlignment
AT1G08080.1 alpha carbonic anhydrase 78.3e-2036.75Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFL--------------------------------
        +K+E  AG+++ING +Y LQQ HWHSPSEHT+NGR         +      +AVV + YKIGR D+F+                                
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFL--------------------------------

Query:  ------------------------SKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDP
                                 K+ TV+R+QVKLLR AVHD A  NARPVQP N R V LY P
Subjt:  ------------------------SKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDP

AT4G20990.1 alpha carbonic anhydrase 41.2e-1833.54Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNG-------RSSNPNAKYPIAVVGIFYKIGRPDSFLSK------------------------------
        V W+G+AG M I  TD+ L Q HWHSPSEHT+NG          + +A+   AV+G+ YK+G P+ FL+K                              
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNG-------RSSNPNAKYPIAVVGIFYKIGRPDSFLSK------------------------------

Query:  -----------------------IGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPN
                               + T+S EQ+  LR AV D  E N+RPVQ   GR V  YDPN
Subjt:  -----------------------IGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPN

AT4G21000.1 alpha carbonic anhydrase 62.3e-1449.3Show/hide
Query:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGRS-------SNPNAKYPIAVVGIFYKIGRPDSFLSKI
        V W+G+ G + I+ TDY L Q HWHSPSEHT+NG S        + +A     VVG+ YK+G PD FL+KI
Subjt:  VKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGRS-------SNPNAKYPIAVVGIFYKIGRPDSFLSKI

AT5G04180.1 alpha carbonic anhydrase 33.9e-1732.18Show/hide
Query:  MRVKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFLS-----------------------------
        M+VKWE +AG + IN TDY L Q+HWH+PSEH L+G+         + + +  +AV+G+ ++ G P++F+S                             
Subjt:  MRVKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGR-------SSNPNAKYPIAVVGIFYKIGRPDSFLS-----------------------------

Query:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYD---PNPT
                                   K+GTVSREQ+ +L  A     EKNARP QP NGR V L +   P+PT
Subjt:  ---------------------------KIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYD---PNPT

AT5G56330.1 alpha carbonic anhydrase 86.0e-1843.65Show/hide
Query:  GNAG-SMEINGTDYLLQQAHWHSPSEHTLNGR---------SSNPNAKYPIAVVGIFYKIGRPDSFL-----------------SKIGTVSREQVKLLRS
        GN G  + I GT Y LQQ HWHSPSEHT+NG+           + + +Y  AVV   Y +G  D FL                   I TVS +QVKLLR 
Subjt:  GNAG-SMEINGTDYLLQQAHWHSPSEHTLNGR---------SSNPNAKYPIAVVGIFYKIGRPDSFL-----------------SKIGTVSREQVKLLRS

Query:  AVHDSAEKNARPVQPHNGRQVDLYDP
        AVHD+++ NARP+Q  N R+V LY P
Subjt:  AVHDSAEKNARPVQPHNGRQVDLYDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTTAAATGGGAGGGAAATGCAGGATCAATGGAGATTAATGGCACAGATTATCTTCTTCAACAAGCTCATTGGCACTCTCCTTCCGAACATACTCTTAATGGAAG
AAGCTCAAACCCAAATGCCAAATATCCGATTGCTGTTGTTGGCATCTTCTACAAGATTGGTCGTCCTGACTCTTTCCTCTCCAAGATTGGAACGGTCTCACGGGAACAAG
TGAAACTTCTAAGATCAGCTGTTCATGATTCTGCAGAGAAGAATGCAAGACCAGTCCAACCACATAATGGGCGACAAGTCGACCTCTATGACCCAAACCCAACGCAGATA
CCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTTAAATGGGAGGGAAATGCAGGATCAATGGAGATTAATGGCACAGATTATCTTCTTCAACAAGCTCATTGGCACTCTCCTTCCGAACATACTCTTAATGGAAG
AAGCTCAAACCCAAATGCCAAATATCCGATTGCTGTTGTTGGCATCTTCTACAAGATTGGTCGTCCTGACTCTTTCCTCTCCAAGATTGGAACGGTCTCACGGGAACAAG
TGAAACTTCTAAGATCAGCTGTTCATGATTCTGCAGAGAAGAATGCAAGACCAGTCCAACCACATAATGGGCGACAAGTCGACCTCTATGACCCAAACCCAACGCAGATA
CCCAATTGAAATTTATTTTTTGTCTTCTTTTCTTTGTAGGATAATTGAGAATTTAATTATTTCCTTCCTTCATTTATTATCTATAATCTCATTTTTATCCACAAATAATA
ATAATGAGCTATGCTCTTTAATTATTTTATCATTTTCTTTTTATGCACGAGACACGTGGGCATGTCATTGGGCATAAATTAATATTATTTTATCATAA
Protein sequenceShow/hide protein sequence
MRVKWEGNAGSMEINGTDYLLQQAHWHSPSEHTLNGRSSNPNAKYPIAVVGIFYKIGRPDSFLSKIGTVSREQVKLLRSAVHDSAEKNARPVQPHNGRQVDLYDPNPTQI
PN