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Lsi03G019930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G019930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontranscription factor MYB114-like
Genome locationchr03:31314306..31314942
RNA-Seq ExpressionLsi03G019930
SyntenyLsi03G019930
Gene Ontology termsNA
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651048.1 hypothetical protein Csa_001732 [Cucumis sativus]1.3e-6280.92Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG--VGSPRHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS
        WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLE  KV+  K+DKVSLKKCG  V   RH+HNE+KD     IS NHF+  FS+L ITSSPYEIRVSNWIS
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG--VGSPRHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS

Query:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        HQLTNEK EVN HHEDCNSL+FCFCY NMNFAERDD+TDHFWDSLASLWDME
Subjt:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

XP_004137980.1 transcription factor MYB27 [Cucumis sativus]1.3e-6280.92Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG--VGSPRHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS
        WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLE  KV+  K+DKVSLKKCG  V   RH+HNE+KD     IS NHF+  FS+L ITSSPYEIRVSNWIS
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG--VGSPRHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS

Query:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        HQLTNEK EVN HHEDCNSL+FCFCY NMNFAERDD+TDHFWDSLASLWDME
Subjt:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

XP_008442723.1 PREDICTED: transcription factor MYB114-like [Cucumis melo]1.6e-6584.21Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG-VGSP-RHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS
        WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLE  KV+HGKQDKVSLKKCG +GSP RH+HNE+KD     ISCNHF+  FS+ EITSSPYEIRVSNWIS
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG-VGSP-RHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS

Query:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        HQLTN K EV  HHEDCNSL+FCFCY NMNFAERDDLTDHFWDSLASLWDME
Subjt:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

XP_022144763.1 transcription factor MYB27-like [Momordica charantia]3.1e-5371.14Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGV-GSPRHNHNEKKDI-----SCNHFEFSSLEITSSPYEIRVSNWISHQL
        WSRIA+WLPGRTDNEIKNYWR+H+RKK PIQ EE KVKHGKQDK+S K+C + GSPR +HNE+KDI     S N F F + EITSSPYEIR+SNWI   L
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGV-GSPRHNHNEKKDI-----SCNHFEFSSLEITSSPYEIRVSNWISHQL

Query:  TNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        +NEK EVNH+ +  NSLEFCFC+ NMN A RDD TDH WDSLASLWDME
Subjt:  TNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

XP_038903011.1 transcription factor MYB27-like [Benincasa hispida]5.1e-7287.84Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKD-----ISCNHFEFSSLEITSSPYEIRVSNWISHQLT
        WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECK KHGKQDKVS KKCG GSPRH+HNE+KD     ISCNHF FS+ EITSSPYEIRVSNWISHQL 
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKD-----ISCNHFEFSSLEITSSPYEIRVSNWISHQLT

Query:  NEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        NEK EVNHHHEDCNSL+FCFCY NMNFAERDD TDHFWDSLASLWDME
Subjt:  NEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

TrEMBL top hitse value%identityAlignment
A0A1S3B717 transcription factor MYB114-like7.7e-6684.21Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG-VGSP-RHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS
        WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLE  KV+HGKQDKVSLKKCG +GSP RH+HNE+KD     ISCNHF+  FS+ EITSSPYEIRVSNWIS
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG-VGSP-RHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS

Query:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        HQLTN K EV  HHEDCNSL+FCFCY NMNFAERDDLTDHFWDSLASLWDME
Subjt:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

A0A5D3DPF8 Transcription factor MYB114-like protein7.7e-6684.21Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG-VGSP-RHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS
        WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLE  KV+HGKQDKVSLKKCG +GSP RH+HNE+KD     ISCNHF+  FS+ EITSSPYEIRVSNWIS
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCG-VGSP-RHNHNEKKD-----ISCNHFE--FSSLEITSSPYEIRVSNWIS

Query:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        HQLTN K EV  HHEDCNSL+FCFCY NMNFAERDDLTDHFWDSLASLWDME
Subjt:  HQLTNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

A0A6J1CU61 transcription factor MYB27-like1.5e-5371.14Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGV-GSPRHNHNEKKDI-----SCNHFEFSSLEITSSPYEIRVSNWISHQL
        WSRIA+WLPGRTDNEIKNYWR+H+RKK PIQ EE KVKHGKQDK+S K+C + GSPR +HNE+KDI     S N F F + EITSSPYEIR+SNWI   L
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGV-GSPRHNHNEKKDI-----SCNHFEFSSLEITSSPYEIRVSNWISHQL

Query:  TNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        +NEK EVNH+ +  NSLEFCFC+ NMN A RDD TDH WDSLASLWDME
Subjt:  TNEKQEVNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

A0A6J1FF95 transcription factor MYB27-like isoform X24.9e-5271.33Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEITSSPYEIRVSNWISHQLTNEKQE
        WSRIA+WLPGRTDNEIKNYWRSHLRKKFPIQLE+CKVKHGK +K+SL        RH+ NE+     NHFE S+LEITSSPYE R+SNWIS+ L NEKQE
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEITSSPYEIRVSNWISHQLTNEKQE

Query:  VNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        VN HHE+CN+ EFCF Y NMN+A RDD +DHFWDSL  LWD+E
Subjt:  VNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

A0A6J1KW53 transcription factor MYB114-like3.7e-5273.43Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEITSSPYEIRVSNWISHQLTNEKQE
        WSRIA+WLPGRTDNEIKNYWRSHLRKKFPI LE CKVKHGKQDK+SL        RH+ NE+   S NHF  S+LEITSSPYEIR+SNWIS+QL NEKQE
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEITSSPYEIRVSNWISHQLTNEKQE

Query:  VNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME
        VN HHE CNSLEFCF Y NMN+A R D  DHFWDS   LWD+E
Subjt:  VNHHHEDCNSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME

SwissProt top hitse value%identityAlignment
Q4JL76 Myb-related protein MYBAS23.5e-0785.19Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKK
        WSRIA+ LPGRTDNEIKNYWR+H+RKK
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKK

Q53NK6 Myb-related protein MYBAS13.5e-0785.19Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKK
        WSRIA+ LPGRTDNEIKNYWR+H+RKK
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKK

Q9LX82 Transcription factor MYB483.5e-0730.82Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEI-------TSSPYEIRVSNWISHQ
        WS+IA+ LPGRTDNEIKNYWR+H+RKK        + K       S   C   S        +D SC H   SS E+       + S  E+   N   + 
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEI-------TSSPYEIRVSNWISHQ

Query:  LTNEKQEVNHH--------HEDCNSLEFCFCYSNMNFAERDDLTDHFWD-SLASLWDME
        L +  +E++H          +  +    C  Y N        L    W+ SL S+W+M+
Subjt:  LTNEKQEVNHH--------HEDCNSLEFCFCYSNMNFAERDDLTDHFWD-SLASLWDME

Q9M0K4 Transcription factor LAF11.6e-0750Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKF--PIQLEECK-VKHGKQDKVSLKKCGVGSP
        WS+IA++LPGRTDNEIKNYW SHL+KK+     L++ K +        SL  CG  +P
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKF--PIQLEECK-VKHGKQDKVSLKKCGVGSP

Q9SCP1 Transcription factor MYB271.4e-0835.16Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQ----LEECKVKHG-----KQDKVSLKKCGVGSPRHNHNE------KKDISCNHFEFSSLEITSSPYEIR
        WS+IA+ LPGRTDNEIKNYWR+H RKK   Q    L E +   G     K  +  + +    S  H   E       K+ +       S  +  SPYE R
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQ----LEECKVKHG-----KQDKVSLKKCGVGSPRHNHNE------KKDISCNHFEFSSLEITSSPYEIR

Query:  VSNWISHQLTNEKQEVN----HHHEDCN
        +S+WIS +++ ++ E N    H    C+
Subjt:  VSNWISHQLTNEKQEVN----HHHEDCN

Arabidopsis top hitse value%identityAlignment
AT3G30210.1 myb domain protein 1211.5e-0854.9Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHG---KQDKVSLK
        WS IA++LPGRTDNEIKNYWR+H +K      ++ KVK     KQ +V LK
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHG---KQDKVSLK

AT3G46130.1 myb domain protein 482.5e-0830.82Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEI-------TSSPYEIRVSNWISHQ
        WS+IA+ LPGRTDNEIKNYWR+H+RKK        + K       S   C   S        +D SC H   SS E+       + S  E+   N   + 
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEI-------TSSPYEIRVSNWISHQ

Query:  LTNEKQEVNHH--------HEDCNSLEFCFCYSNMNFAERDDLTDHFWD-SLASLWDME
        L +  +E++H          +  +    C  Y N        L    W+ SL S+W+M+
Subjt:  LTNEKQEVNHH--------HEDCNSLEFCFCYSNMNFAERDDLTDHFWD-SLASLWDME

AT3G46130.2 myb domain protein 482.5e-0830.82Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEI-------TSSPYEIRVSNWISHQ
        WS+IA+ LPGRTDNEIKNYWR+H+RKK        + K       S   C   S        +D SC H   SS E+       + S  E+   N   + 
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEI-------TSSPYEIRVSNWISHQ

Query:  LTNEKQEVNHH--------HEDCNSLEFCFCYSNMNFAERDDLTDHFWD-SLASLWDME
        L +  +E++H          +  +    C  Y N        L    W+ SL S+W+M+
Subjt:  LTNEKQEVNHH--------HEDCNSLEFCFCYSNMNFAERDDLTDHFWD-SLASLWDME

AT3G53200.1 myb domain protein 271.0e-0935.16Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQ----LEECKVKHG-----KQDKVSLKKCGVGSPRHNHNE------KKDISCNHFEFSSLEITSSPYEIR
        WS+IA+ LPGRTDNEIKNYWR+H RKK   Q    L E +   G     K  +  + +    S  H   E       K+ +       S  +  SPYE R
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQ----LEECKVKHG-----KQDKVSLKKCGVGSPRHNHNE------KKDISCNHFEFSSLEITSSPYEIR

Query:  VSNWISHQLTNEKQEVN----HHHEDCN
        +S+WIS +++ ++ E N    H    C+
Subjt:  VSNWISHQLTNEKQEVN----HHHEDCN

AT4G25560.1 myb domain protein 181.1e-0850Show/hide
Query:  WSRIAQWLPGRTDNEIKNYWRSHLRKKF--PIQLEECK-VKHGKQDKVSLKKCGVGSP
        WS+IA++LPGRTDNEIKNYW SHL+KK+     L++ K +        SL  CG  +P
Subjt:  WSRIAQWLPGRTDNEIKNYWRSHLRKKF--PIQLEECK-VKHGKQDKVSLKKCGVGSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGTCGAGAATTGCACAATGGCTTCCGGGAAGAACTGATAATGAGATCAAGAACTACTGGAGAAGCCATTTGAGAAAGAAGTTCCCAATTCAACTAGAAGAGTG
CAAAGTAAAACATGGGAAACAGGACAAAGTCTCATTGAAGAAATGTGGTGTAGGAAGTCCAAGGCATAACCATAATGAAAAGAAGGATATATCCTGCAATCATTTCGAGT
TCTCGAGCCTCGAGATCACGAGTTCGCCTTATGAAATTCGGGTATCGAATTGGATTTCGCATCAGTTGACAAATGAGAAGCAGGAAGTGAATCATCATCATGAAGATTGC
AACAGTTTAGAATTCTGTTTTTGTTATTCAAATATGAACTTTGCAGAGAGAGATGATCTGACAGATCATTTCTGGGACTCATTGGCTTCTCTTTGGGATATGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATGGTCGAGAATTGCACAATGGCTTCCGGGAAGAACTGATAATGAGATCAAGAACTACTGGAGAAGCCATTTGAGAAAGAAGTTCCCAATTCAACTAGAAGAGTG
CAAAGTAAAACATGGGAAACAGGACAAAGTCTCATTGAAGAAATGTGGTGTAGGAAGTCCAAGGCATAACCATAATGAAAAGAAGGATATATCCTGCAATCATTTCGAGT
TCTCGAGCCTCGAGATCACGAGTTCGCCTTATGAAATTCGGGTATCGAATTGGATTTCGCATCAGTTGACAAATGAGAAGCAGGAAGTGAATCATCATCATGAAGATTGC
AACAGTTTAGAATTCTGTTTTTGTTATTCAAATATGAACTTTGCAGAGAGAGATGATCTGACAGATCATTTCTGGGACTCATTGGCTTCTCTTTGGGATATGGAATAA
Protein sequenceShow/hide protein sequence
MGWSRIAQWLPGRTDNEIKNYWRSHLRKKFPIQLEECKVKHGKQDKVSLKKCGVGSPRHNHNEKKDISCNHFEFSSLEITSSPYEIRVSNWISHQLTNEKQEVNHHHEDC
NSLEFCFCYSNMNFAERDDLTDHFWDSLASLWDME