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Lsi03G020610 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G020610
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein REVEILLE 8-like isoform X2
Genome locationchr03:31934770..31936435
RNA-Seq ExpressionLsi03G020610
SyntenyLsi03G020610
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038906057.1 protein REVEILLE 8 isoform X2 [Benincasa hispida]5.3e-3097.26Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

XP_038906059.1 protein REVEILLE 8 isoform X4 [Benincasa hispida]5.3e-3097.26Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

XP_038906061.1 protein REVEILLE 8 isoform X6 [Benincasa hispida]2.6e-29100Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ
        MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ

XP_038906062.1 protein REVEILLE 8 isoform X7 [Benincasa hispida]5.3e-3097.26Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

XP_038906063.1 protein REVEILLE 8 isoform X8 [Benincasa hispida]2.6e-29100Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ
        MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ

TrEMBL top hitse value%identityAlignment
A0A0A0LFP1 HTH myb-type domain-containing protein2.2e-2994.52Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        MNSNASNPNPSM +STAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

A0A1S3B5M6 protein REVEILLE 8-like isoform X11.1e-2897.18Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ
        MNSNASNPNPSM +STAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ

A0A1S3B648 protein REVEILLE 8-like isoform X22.2e-2994.52Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        MNSNASNPNPSM +STAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

A0A1S3B6W8 protein REVEILLE 8-like isoform X51.1e-2897.18Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ
        MNSNASNPNPSM +STAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ

A0A5D3DNC4 Protein REVEILLE 8-like isoform X22.2e-2994.52Show/hide
Query:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        MNSNASNPNPSM +STAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

SwissProt top hitse value%identityAlignment
Q54IF9 Myb-like protein G1.8e-1770.49Show/hide
Query:  ATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        A + AA ++  K RKPYTI+K RE+WT+EEH KFLEAL LFDRDWKKIE FVGSKTVIQ++
Subjt:  ATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

Q6R0G4 Protein REVEILLE 44.7e-2179.37Show/hide
Query:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        ++AT+ A ++  KKVRK YTITKSRESWTE EHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

Q6R0H0 Protein REVEILLE 31.7e-1873.02Show/hide
Query:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        S  T +  +   KKVRKPYTITKSRE+WTE+EHDKFLEAL LFDRDWKKI+ FVGSKTVIQ++
Subjt:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

Q8H0W3 Protein REVEILLE 65.7e-1962.96Show/hide
Query:  SNASNPNPSMATSTAADSS----------GKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        S++S+P  S      AD +           KK+RKPYTITKSRESWTE EHDKFLEALQLFDRDWKKIE F+GSKTVIQ++
Subjt:  SNASNPNPSMATSTAADSS----------GKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

Q8RWU3 Protein REVEILLE 87.7e-2481.82Show/hide
Query:  PNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        P P  +T   A+ S KKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  PNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

Arabidopsis top hitse value%identityAlignment
AT3G09600.1 Homeodomain-like superfamily protein5.5e-2581.82Show/hide
Query:  PNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        P P  +T   A+ S KKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  PNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

AT3G09600.2 Homeodomain-like superfamily protein5.5e-2581.82Show/hide
Query:  PNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        P P  +T   A+ S KKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  PNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

AT5G02840.1 LHY/CCA1-like 13.3e-2279.37Show/hide
Query:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        ++AT+ A ++  KKVRK YTITKSRESWTE EHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

AT5G02840.2 LHY/CCA1-like 13.3e-2279.37Show/hide
Query:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        ++AT+ A ++  KKVRK YTITKSRESWTE EHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK

AT5G02840.3 LHY/CCA1-like 13.3e-2279.37Show/hide
Query:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK
        ++AT+ A ++  KKVRK YTITKSRESWTE EHDKFLEALQLFDRDWKKIEDFVGSKTVIQ++
Subjt:  SMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCAACGCTTCGAATCCAAATCCTTCTATGGCGACCTCCACTGCTGCTGATTCCTCCGGCAAGAAGGTTCGCAAGCCCTACACCATTACCAAGTCCAGA
GAGAGCTGGACTGAAGAAGAGCACGATAAATTCCTCGAAGCTCTTCAGCTGTTTGATCGTGACTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAGACAGTTATT
CAGGTGAAAGACGGTCGATTTGGTTTGTTGGAGCTTTTGCTCTTTGATTTCTTCCCACAACATGTTCTTTACTCTACAGTCGATGCTGCAGATTCGGAGTCACGC
CCAAAAGTACTTTTTGAAAGTCCAAAAAAATGGAACGATAGCACATGTACCTCCGCCACGCCCCAAACGCAAGGCTTCACATCCTTATCCACAAAAGGCATCAAA
AAATGGTACGGCAATCTGATTCATAAGCAACACACATACTTCAAACCTCCTAATTACTGA
mRNA sequenceShow/hide mRNA sequence
CGATTAAATCGTTTCAATCGAACGCTCCCTAGTGGCCAACCAAACGAAAGGCGTCAAATTTCGCTCCACAAGTTCTCATTTCACACCTTGCCCGCCATTGCTACC
TTCCTCCGTCTCTGCTTCGATTCAGCCTTATCATGCTCTGATTAACCACATGAACTCCAACGCTTCGAATCCAAATCCTTCTATGGCGACCTCCACTGCTGCTGA
TTCCTCCGGCAAGAAGGTTCGCAAGCCCTACACCATTACCAAGTCCAGAGAGAGCTGGACTGAAGAAGAGCACGATAAATTCCTCGAAGCTCTTCAGCTGTTTGA
TCGTGACTGGAAGAAAATTGAAGATTTTGTAGGTTCAAAGACAGTTATTCAGGTGAAAGACGGTCGATTTGGTTTGTTGGAGCTTTTGCTCTTTGATTTCTTCCC
ACAACATGTTCTTTACTCTACAGTCGATGCTGCAGATTCGGAGTCACGCCCAAAAGTACTTTTTGAAAGTCCAAAAAAATGGAACGATAGCACATGTACCTCCGC
CACGCCCCAAACGCAAGGCTTCACATCCTTATCCACAAAAGGCATCAAAAAATGGTACGGCAATCTGATTCATAAGCAACACACATACTTCAAACCTCCTAATTA
CTGA
Protein sequenceShow/hide protein sequence
MNSNASNPNPSMATSTAADSSGKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQVKDGRFGLLELLLFDFFPQHVLYSTVDAADSESR
PKVLFESPKKWNDSTCTSATPQTQGFTSLSTKGIKKWYGNLIHKQHTYFKPPNY