CuGenDBv2

Gene ID	Lsi03G020760
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Unknown protein
Genome location	chr03:32043252..32043710
RNA-Seq Expression	Lsi03G020760
Synteny	Lsi03G020760
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6580574.1 hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-55

76.28

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTT YCIS   + RPPRAAYINL NWTD DNE  KSAIPR  RRV VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R    N NR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

KAG7017326.1 hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyrosperma]

7.0e-56

76.28

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTT YCIS   + RPPRAAYINL NWTDSDNE  KSAIPR  RRV VVDGVSCRQ+YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R    N NR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

XP_022934190.1 uncharacterized protein LOC111441435 [Cucurbita moschata]

2.4e-56

76.92

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTT YCIS   + RPPRAAYINL NWTDSDNE  KSAIPR  RRV VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R    N NR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

XP_022983914.1 uncharacterized protein LOC111482393 [Cucurbita maxima]

6.4e-57

77.56

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTT YCIS   + RPPRAAYINL NWTDSDNE  KSAIPR  RRV VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  ----RNLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
            RN NR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  ----RNLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

XP_023528009.1 uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo]

6.4e-57

77.56

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTT YCIS   + RPPRAAYINL NWTDSDNE  KSAIPR  RRV VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R    N NR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFM8 Uncharacterized protein

2.9e-55

73.29

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTTK+CIS A + R PRA YINL NWT+S+NEIVKSAIP+A RRV VVDGVSCRQMYLRSY FS KKESV EKT++CL KVKEKLGQRKRR  GE 
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  RNLN-----------RKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN
        RNL+           +KR +KCLIWKKMK+FSCSFI+FGIFRR+LSCAA+IDVVEQS GRN
Subjt:  RNLN-----------RKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN

A0A1S3B628 uncharacterized protein LOC103486422

6.4e-55

74.69

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTTK+CIS A + R PRA YINL NWTDS+NEIVKSA+P+  RRV VVDGVSCRQMYLRSYKFS KKESV EKT++CL KVKEKLGQRKR   GE 
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R---------NLNRKRKK---KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN
                  NLNRKRKK   KCLIWKKMK+FSCSFI+FGIFRRILSCAA+IDVVEQS GRN
Subjt:  R---------NLNRKRKK---KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN

A0A5D3DNA8 Uncharacterized protein

6.4e-55

74.69

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTTK+CIS A + R PRA YINL NWTDS+NEIVKSA+P+  RRV VVDGVSCRQMYLRSYKFS KKESV EKT++CL KVKEKLGQRKR   GE 
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R---------NLNRKRKK---KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN
                  NLNRKRKK   KCLIWKKMK+FSCSFI+FGIFRRILSCAA+IDVVEQS GRN
Subjt:  R---------NLNRKRKK---KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN

A0A6J1F6Z2 uncharacterized protein LOC111441435

1.2e-56

76.92

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTT YCIS   + RPPRAAYINL NWTDSDNE  KSAIPR  RRV VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R    N NR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  R----NLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

A0A6J1J8Y5 uncharacterized protein LOC111482393

3.1e-57

77.56

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Query:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MS VCTT YCIS   + RPPRAAYINL NWTDSDNE  KSAIPR  RRV VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  ----RNLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
            RN NR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  ----RNLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G46300.1 unknown protein

2.9e-07

34.68

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Query:  PRAAYINLYNWTDSDNEIVKSAIPRASR-RVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKRNLNRKRKKKCLIWKKMK
        P   Y NLY W  ++ E V+S     S+ R +VVD +SCRQMYLRSY FST+     E      G   E + +R  +         +K  K  +  +  K
Subjt:  PRAAYINLYNWTDSDNEIVKSAIPRASR-RVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKRNLNRKRKKKCLIWKKMK

Query:  EFSCSFILFGIFRRILSCAASIDV
         +SC   +F + R+ LSCA++  V
Subjt:  EFSCSFILFGIFRRILSCAASIDV

AT3G46310.1 unknown protein

9.3e-06

39.71

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Query:  CISAAGNS---RPPRAAYINLYNWTDSDNEIVKSAIPRAS-RRVSVVDGVSCRQMYLRSYKFSTKKES
        C++   N+   RP R  +  ++ W  ++ E V+S     S RR + V+ +SCRQMYLRSY FS K+E+
Subjt:  CISAAGNS---RPPRAAYINLYNWTDSDNEIVKSAIPRAS-RRVSVVDGVSCRQMYLRSYKFSTKKES

AT5G02640.1 unknown protein

3.3e-19

41.95

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Query:  MSGVCTTKYCISAAGNS----RPPRAAYINLYNWTDSDNEIVKS-----AIPRASRRVSVVDGVSCRQMYLRSYKFS-----TKKESVPEKTR-RCLGKV
        M+ VC +  CI+ A +     RP RA+Y+NLY W +SD E V+S      +P A     VVD +SCRQMYLRSY FS     +K E V   T+  CLG+V
Subjt:  MSGVCTTKYCISAAGNS----RPPRAAYINLYNWTDSDNEIVKS-----AIPRASRRVSVVDGVSCRQMYLRSYKFS-----TKKESVPEKTR-RCLGKV

Query:  KEKLGQRKR---------------RRSGEKRNLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVE
        K     R++               RR GEKR ++RK K         +E +CS IL  IFRR+LSCAA++DVV+
Subjt:  KEKLGQRKR---------------RRSGEKRNLNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVE

Sequences

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CDS sequence

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ATGAGCGGCGTCTGCACAACGAAGTACTGCATCAGCGCCGCCGGGAATAGCCGTCCGCCGCGCGCGGCGTATATCAACCTCTACAACTGGACGGATTCGGACAACGAGAT
CGTGAAATCGGCGATTCCGAGAGCGAGCCGCAGAGTTTCGGTAGTGGATGGAGTATCGTGCAGACAAATGTACTTGAGGAGCTATAAATTTTCGACGAAGAAGGAATCGG
TGCCGGAGAAAACGAGGAGGTGTTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAGAAAGAGGAGAAGATCAGGGGAGAAGAGGAATCTGAATCGGAAGAGGAAGAAGAAG
TGTTTGATTTGGAAGAAGATGAAGGAATTTTCGTGTAGTTTCATTCTGTTTGGGATTTTTCGAAGGATTTTGTCATGTGCTGCGAGTATTGATGTGGTGGAACAGAGTAG
TGGAAGAAATGGTAATTGA

mRNA sequence

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Protein sequence

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MSGVCTTKYCISAAGNSRPPRAAYINLYNWTDSDNEIVKSAIPRASRRVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKRNLNRKRKKK
CLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

Lsi03G020760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome