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Lsi03G020860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G020860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:32154391..32154975
RNA-Seq ExpressionLsi03G020860
SyntenyLsi03G020860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596424.1 hypothetical protein SDJN03_09604, partial [Cucurbita argyrosperma subsp. sororia]4.9e-7883.87Show/hide
Query:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH
        MGRLQI P +NNNPL +QSLE+LLFDAA+L DDDNDENKTQLAKEE  LE EIIRVI  GN DSLKPNSGQAVTIGEHH+CVGF EEKDSDYRVWEWHGH
Subjt:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH

Query:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        IMLFDEENGYSPEYIYGNYFERLQGK NRELNK+   E  E+EEEE++DEKEE+VG LGLRELIDGG SS GRILHRNVNASSQRF
Subjt:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

XP_022145740.1 uncharacterized protein LOC111015123 [Momordica charantia]1.7e-8387.77Show/hide
Query:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH
        MGRLQI PPNNNNPL SQSLE+LLFDAA+L DDDND+NKTQLAKEE KLE EIIRVI +GNTDSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGH
Subjt:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH

Query:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEE--EEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        IMLFDEENGYSPEYIYGNYFERLQGK NRELNKR+EE+E+E+EE  EEE+DEK+EKVG LGLRELIDGG SS GRILHRNVNASSQRF
Subjt:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEE--EEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

XP_022934613.1 uncharacterized protein LOC111441746 [Cucurbita moschata]8.3e-7883.87Show/hide
Query:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH
        MGRLQI P +NNNPL +QSLE+LLFDAA+L DDDNDENKTQLAKEE  LE EIIRVI  GN DSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGH
Subjt:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH

Query:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        IMLFDEENGYSPEYIYGNYFERLQGK NRELNK+   E  E+EEE+++DEKEE+VG LGLRELIDGG SS GRILHRNVNASSQRF
Subjt:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

XP_038905388.1 AT-rich interactive domain-containing protein 4B isoform X1 [Benincasa hispida]4.4e-7985.56Show/hide
Query:  MGRLQIGPPNN--NNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWH
        M RL I P NN  NNPL SQSLEELLFDAA+L DDDNDENKTQLAKEE KLE EIIRVI +GNTDSLKPNSGQAVTIGEHHICV F EEKDSD+RVWEWH
Subjt:  MGRLQIGPPNN--NNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWH

Query:  GHIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQR
        GH+MLFDEE+GYSPEYIYGNYFERL+GK NRELNKR+EEEEEEDEEEEE+DEKEEKVG LGLRELIDGG S+A RILHRNV+ASSQR
Subjt:  GHIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQR

XP_038905389.1 AT-rich interactive domain-containing protein 4B isoform X2 [Benincasa hispida]8.9e-8085.64Show/hide
Query:  MGRLQIGPPNN--NNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWH
        M RL I P NN  NNPL SQSLEELLFDAA+L DDDNDENKTQLAKEE KLE EIIRVI +GNTDSLKPNSGQAVTIGEHHICV F EEKDSD+RVWEWH
Subjt:  MGRLQIGPPNN--NNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWH

Query:  GHIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        GH+MLFDEE+GYSPEYIYGNYFERL+GK NRELNKR+EEEEEEDEEEEE+DEKEEKVG LGLRELIDGG S+A RILHRNV+ASSQRF
Subjt:  GHIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

TrEMBL top hitse value%identityAlignment
A0A6J1CVB7 uncharacterized protein LOC1110151238.4e-8487.77Show/hide
Query:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH
        MGRLQI PPNNNNPL SQSLE+LLFDAA+L DDDND+NKTQLAKEE KLE EIIRVI +GNTDSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGH
Subjt:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH

Query:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEE--EEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        IMLFDEENGYSPEYIYGNYFERLQGK NRELNKR+EE+E+E+EE  EEE+DEK+EKVG LGLRELIDGG SS GRILHRNVNASSQRF
Subjt:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEE--EEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

A0A6J1F6Q3 uncharacterized protein LOC1114413741.2e-7482.35Show/hide
Query:  MGRLQIGPPN-NNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHG
        MGRLQI PPN NNNPL SQSLE+LLFD A+L DDDNDENKTQLAKEE KLE EIIR+I +GN+DSLKPNSGQAVTIGEHHICVGF EE DS YRVWEWHG
Subjt:  MGRLQIGPPN-NNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHG

Query:  HIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        HIMLFDEENGY+PEYIYGNYFE L GK  REL+K +EEEE+E+EEEE+ +E EEKVG LGLRELI+GG SSAGRILHRNVNASSQRF
Subjt:  HIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

A0A6J1F855 uncharacterized protein LOC1114417464.0e-7883.87Show/hide
Query:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH
        MGRLQI P +NNNPL +QSLE+LLFDAA+L DDDNDENKTQLAKEE  LE EIIRVI  GN DSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGH
Subjt:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH

Query:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        IMLFDEENGYSPEYIYGNYFERLQGK NRELNK+   E  E+EEE+++DEKEE+VG LGLRELIDGG SS GRILHRNVNASSQRF
Subjt:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

A0A6J1J2Z9 uncharacterized protein LOC1114813905.5e-7582.35Show/hide
Query:  MGRLQIGPPN-NNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHG
        MGRLQI  PN NNNPL SQSLE+LLFD A+L DDDNDENKTQLAKEE KLE EIIR+I +GN+DSLKPNSGQAVTIGEHHICVGF EEKDS YRVWEWHG
Subjt:  MGRLQIGPPN-NNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHG

Query:  HIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        HIMLFDEENGY+PEYIYGNYFE LQGKF REL+K +EEE +E+EEEE     EEKVG LGLRELI+GG SSAGRILHRNVNASSQRF
Subjt:  HIMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

A0A6J1KW97 uncharacterized protein LOC1114987615.3e-7883.33Show/hide
Query:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH
        MGRLQI P +NNNP+ +QSLE+LLFDAA+L DDDNDENKTQLAKEE  LE EIIRVI  GNTDSLKPNSGQAVTIGEHHICVGF EEKDSDYRVWEWHGH
Subjt:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH

Query:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF
        IMLFDEENGYSPEYIYGNYFERLQGK NRELNK+    E E+EEEE++DEKEE +  LGLRELIDGG SS GRILHRNVNASSQRF
Subjt:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55710.1 unknown protein5.9e-0551.39Show/hide
Query:  YGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHR-NVNASSQRF
        + NYFERL  K    L   R  E+E+ +E +EED     V N GLRELIDGG  + GRILHR N+N  S RF
Subjt:  YGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHR-NVNASSQRF

AT3G53342.1 unknown protein1.1e-0650Show/hide
Query:  YGNYFERLQGKF--NRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHR-NVNASSQRF
        +GNYFERL  K   NR +           E+E++++ KEE+V N GLRELIDGG  + GRILHR N+N  S RF
Subjt:  YGNYFERLQGKF--NRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHR-NVNASSQRF

AT3G53630.1 unknown protein5.6e-5663.44Show/hide
Query:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH
        +GRLQI PPN++    SQSL++LLF + D   DD+ E +T L +EE +LE E+IRVI SG +DSLKPNSGQAVT+ EHHICVGF E+++SDYRVWEWHGH
Subjt:  MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGH

Query:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHR-NVNASSQR
        IMLFDEENGY+PEYIYGNYFERL  K     N RR E+E++ E       KEE+V NLGLRELIDGG ++ GRILHR N+N  S R
Subjt:  IMLFDEENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHR-NVNASSQR

AT4G18692.1 unknown protein4.8e-0750Show/hide
Query:  YGNYFERLQGKF--NRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHR-NVNASSQRF
        +GNYFERL  K   NR +           E+E++++ KEE+V N GLRELIDGG ++ GRILHR N+N  S RF
Subjt:  YGNYFERLQGKF--NRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHR-NVNASSQRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGGCTCCAAATTGGGCCTCCAAACAACAACAATCCCCTTCCCTCCCAATCCCTCGAAGAACTTCTCTTCGACGCCGCCGATCTCTTCGACGATGACAAC
GACGAAAACAAAACCCAGCTCGCGAAAGAGGAATTGAAGCTCGAGCTTGAGATTATTCGCGTTATTTTCTCCGGAAATACCGATTCCCTAAAACCCAATTCCGGT
CAGGCCGTCACAATCGGCGAGCACCACATATGCGTGGGGTTTCAAGAGGAGAAGGATTCAGATTATCGAGTTTGGGAATGGCACGGGCATATCATGTTGTTTGAT
GAAGAAAATGGGTACTCGCCGGAGTATATCTATGGGAACTACTTTGAGAGGCTTCAGGGAAAGTTCAACCGTGAGTTGAATAAACGAAGAGAGGAAGAAGAGGAG
GAGGACGAGGAGGAGGAAGAAGAAGATGAAAAAGAGGAGAAGGTGGGCAACTTGGGACTTCGGGAGCTGATTGATGGCGGTGGTTCGAGTGCCGGTCGGATTCTT
CATCGTAATGTCAACGCCAGTTCTCAAAGGTTCCGCATAATTTACTGTCAATTTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGGCTCCAAATTGGGCCTCCAAACAACAACAATCCCCTTCCCTCCCAATCCCTCGAAGAACTTCTCTTCGACGCCGCCGATCTCTTCGACGATGACAAC
GACGAAAACAAAACCCAGCTCGCGAAAGAGGAATTGAAGCTCGAGCTTGAGATTATTCGCGTTATTTTCTCCGGAAATACCGATTCCCTAAAACCCAATTCCGGT
CAGGCCGTCACAATCGGCGAGCACCACATATGCGTGGGGTTTCAAGAGGAGAAGGATTCAGATTATCGAGTTTGGGAATGGCACGGGCATATCATGTTGTTTGAT
GAAGAAAATGGGTACTCGCCGGAGTATATCTATGGGAACTACTTTGAGAGGCTTCAGGGAAAGTTCAACCGTGAGTTGAATAAACGAAGAGAGGAAGAAGAGGAG
GAGGACGAGGAGGAGGAAGAAGAAGATGAAAAAGAGGAGAAGGTGGGCAACTTGGGACTTCGGGAGCTGATTGATGGCGGTGGTTCGAGTGCCGGTCGGATTCTT
CATCGTAATGTCAACGCCAGTTCTCAAAGGTTCCGCATAATTTACTGTCAATTTTGCTGA
Protein sequenceShow/hide protein sequence
MGRLQIGPPNNNNPLPSQSLEELLFDAADLFDDDNDENKTQLAKEELKLELEIIRVIFSGNTDSLKPNSGQAVTIGEHHICVGFQEEKDSDYRVWEWHGHIMLFD
EENGYSPEYIYGNYFERLQGKFNRELNKRREEEEEEDEEEEEEDEKEEKVGNLGLRELIDGGGSSAGRILHRNVNASSQRFRIIYCQFC