; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G021050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G021050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:32288730..32291798
RNA-Seq ExpressionLsi03G021050
SyntenyLsi03G021050
Gene Ontology termsNA
InterPro domainsIPR040344 - Uncharacterized protein At3g17950-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580547.1 hypothetical protein SDJN03_20549, partial [Cucurbita argyrosperma subsp. sororia]8.4e-8583.81Show/hide
Query:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE
        MLSDSTMA+QEDGWPLGLRLMN RVGLAGNHDLSASVSFNTL THSPSSFTDSSSDLDTE      STGSFYHDKSITLGSLIGVSS+ ELSRRSTKGN 
Subjt:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE

Query:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGEEESR
        VEIL+DKKKYKSKPWLFSLSLCIKLRPDAVSL+SSPSLEHSLEAE+RA      HNPT+YGPNDYSP+RP  VSGTNSLFSSDQVAPV  F PA  EESR
Subjt:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGEEESR

Query:  RSNEELVQDG
        RS  EL +DG
Subjt:  RSNEELVQDG

KAG7017299.1 hypothetical protein SDJN02_19162 [Cucurbita argyrosperma subsp. argyrosperma]8.4e-8583.81Show/hide
Query:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE
        MLSDSTMA+QEDGWPLGLRLMN RVGLAGNHDLSASVSFNTL THSPSSFTDSSSDLDTE      STGSFYHDKSITLGSLIGVSS+ ELSRRSTKGN 
Subjt:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE

Query:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGEEESR
        VEIL+DKKKYKSKPWLFSLSLCIKLRPDAVSL+SSPSLEHSLEAE+RA      HNPT+YGPNDYSP+RP  VSGTNSLFSSDQVAPV  F PA  EESR
Subjt:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGEEESR

Query:  RSNEELVQDG
        RS  EL +DG
Subjt:  RSNEELVQDG

XP_023527603.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]1.9e-8483.81Show/hide
Query:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE
        MLSDSTMA+QEDGWPLGLRLMN RVGLAGNHDLSASVSFNTL THSPSSFTDSSSDLDTE      STGSFYHDKSITLGSLIGVSS+ ELSRRSTKGN 
Subjt:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE

Query:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGEEESR
        VEIL+DKKKYKSKPWLFSLSLCIKLRPDAVSL+SSPSLEHSLEAE+RA      HNPT+YGPNDYSP+RP  VSGTNSLFSSDQVAPV  F PA  EESR
Subjt:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGEEESR

Query:  RSNEELVQDG
        RS  EL +DG
Subjt:  RSNEELVQDG

XP_038904630.1 uncharacterized protein LOC120090965 isoform X1 [Benincasa hispida]1.7e-8584.54Show/hide
Query:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE
        MLSDSTMA+Q+DGWPLGLRLMN R  +A NHDLSASVSFNTL THSPSSFTDSSSDLDTE      ST SFYHDKSITLGSLIGVSSIFELS+RST+GN+
Subjt:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE

Query:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRR
        VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSL+SSPSLEHSLEAE++ TRNHRIHNPTLYGPNDYSPIRP  VS TN+LFSS+QVAPVSF  AG+EESRR
Subjt:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRR

Query:  SNEELVQ
        S+ ELVQ
Subjt:  SNEELVQ

XP_038904631.1 uncharacterized protein LOC120090965 isoform X2 [Benincasa hispida]1.7e-8584.54Show/hide
Query:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE
        MLSDSTMA+Q+DGWPLGLRLMN R  +A NHDLSASVSFNTL THSPSSFTDSSSDLDTE      ST SFYHDKSITLGSLIGVSSIFELS+RST+GN+
Subjt:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE

Query:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRR
        VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSL+SSPSLEHSLEAE++ TRNHRIHNPTLYGPNDYSPIRP  VS TN+LFSS+QVAPVSF  AG+EESRR
Subjt:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRR

Query:  SNEELVQ
        S+ ELVQ
Subjt:  SNEELVQ

TrEMBL top hitse value%identityAlignment
A0A0A0LA63 Uncharacterized protein7.7e-8482.46Show/hide
Query:  MLSDSTMARQEDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGN
        ML DSTMA+QEDGWPLGLR+MNARV G+AGNHDLSASVSFNTL THSPSSFTDSSSDLDTE      STGSFY DKSITLGSLIGVSSI ELSRRSTKGN
Subjt:  MLSDSTMARQEDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGN

Query:  EVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESR
        +VEILEDKKKYKSKP LFSLSLCIKLRPDAVS +SSPSL+HSLEAE++ATRN R HNPTLYGPNDYSP     V G NSLFSSDQV PVSFE AGEEESR
Subjt:  EVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESR

Query:  RSNEELVQDGD
        RS+ ELV++G+
Subjt:  RSNEELVQDGD

A0A1S3B5Y9 uncharacterized protein LOC1034863925.9e-8482.46Show/hide
Query:  MLSDSTMARQEDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGN
        ML DSTMA QEDGWPLGLR+MNARV GLAGNHDLSASVSFNTL THSPSSFTDSSSDLDT+      STGSFY DKSITLGSLIGVSSI ELSRRSTKGN
Subjt:  MLSDSTMARQEDGWPLGLRLMNARV-GLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGN

Query:  EVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESR
        +VEILEDKKKYKSKPWLFSLSLCIKLRPDAVS +SSPSL+HSLEAE++ATRN R HN TLYGPNDYS + P  VSG NSLFSSD+V PVSF  AGEEESR
Subjt:  EVEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESR

Query:  RSNEELVQDGD
        RS+ ELVQ+G+
Subjt:  RSNEELVQDGD

A0A6J1CUV3 uncharacterized protein LOC111014995 isoform X23.2e-8283.92Show/hide
Query:  MARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNEVEILED
        MA+QEDGWPLGLRLMNARVGLAGN DLSASVSFNTL THSPSSFTDSSSDLDTE      STGSFYHDKSITLGSLIGVSSI ELSRRSTKGN+VE LED
Subjt:  MARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNEVEILED

Query:  KKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRRSNEEL
        KKK KSKPWLFSLSLCIKLRPDAVSL SSPSLEHSL AE+ ATRNHRI NPT+YGPND+SPIRP  VSGTNSLF+ DQVAP+SF P  EE +R+SN EL
Subjt:  KKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRRSNEEL

A0A6J1CVN1 uncharacterized protein LOC111014995 isoform X12.9e-8384.92Show/hide
Query:  MARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNEVEILED
        MA+QEDGWPLGLRLMNARVGLAGN DLSASVSFNTL THSPSSFTDSSSDLDTEV  F  STGSFYHDKSITLGSLIGVSSI ELSRRSTKGN+VE LED
Subjt:  MARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNEVEILED

Query:  KKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRRSNEEL
        KKK KSKPWLFSLSLCIKLRPDAVSL SSPSLEHSL AE+ ATRNHRI NPT+YGPND+SPIRP  VSGTNSLF+ DQVAP+SF P  EE +R+SN EL
Subjt:  KKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRRSNEEL

A0A6J1F3R7 uncharacterized protein At3g17950-like3.5e-8483.33Show/hide
Query:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE
        MLSDSTMA+QEDGWPLGLRLMN RVGLA NHDLSASVSFNTL THSPSSFTDSSSDLDTE      STGSFYHDKSITLGSLIGVSS+ ELSRRSTKGN 
Subjt:  MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNE

Query:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGEEESR
        VEIL+DKKKYKSKPWLFSLSLCIKLRPDAVSL+SSPSLEHSLEAE+RA      HNPT+YGPNDYSP+RP  VSGTNSLFSSDQVAPV  F PA  EESR
Subjt:  VEILEDKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVS-FEPAGEEESR

Query:  RSNEELVQDG
        RS  EL +DG
Subjt:  RSNEELVQDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17950.1 unknown protein1.6e-0460.98Show/hide
Query:  SPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVS
        SP+  + SSSDLDTE      STGSF+HD+SITLG+L+G S
Subjt:  SPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVS

AT5G02440.1 unknown protein3.5e-2040.33Show/hide
Query:  MARQEDGWPLGLRLMNARVG--LAGNHD-------LSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRS--
        MA QE+GWPLGLR +NAR+G    G H         + S+SF++LL+ SPSS   SSSDLD++      S GSF+ D+S TLG+LIG+SS  ELSRRS  
Subjt:  MARQEDGWPLGLRLMNARVG--LAGNHD-------LSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRS--

Query:  TKGNEVEILEDKKKYKS-----KPWLFSLSLCIKLRPDAVSL-------------NSSPSLEHSLEAEKRATRNHRIHNPT
        T+ ++     + + +K+     KPW+F  S+C KL  +A  +             N+  SL H L  E+RA  +     PT
Subjt:  TKGNEVEILEDKKKYKS-----KPWLFSLSLCIKLRPDAVSL-------------NSSPSLEHSLEAEKRATRNHRIHNPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCAGATTCAACTATGGCTCGACAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACGCTAGAGTTGGATTGGCGGGAAATCATGATCTCTCTGCG
TCGGTTTCTTTCAATACTTTGCTTACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGGTCTGTTACTTCCTTTTGTCAACTGGATCA
TTCTACCATGATAAGAGCATCACTCTTGGGAGTCTCATTGGAGTCTCTAGCATTTTTGAGCTATCGCGAAGATCGACGAAAGGAAATGAAGTGGAAATACTCGAA
GATAAAAAGAAGTACAAGTCCAAACCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAACAGCTCTCCTTCACTTGAGCAC
TCTCTTGAAGCAGAAAAGAGAGCTACAAGAAATCACAGGATTCACAACCCTACCCTTTATGGACCCAATGATTACTCACCTATTCGTCCTGTAACTGTTTCTGGA
ACAAACTCTTTGTTTTCCAGTGATCAAGTTGCTCCTGTCTCATTTGAACCGGCGGGGGAAGAAGAAAGCAGAAGATCAAATGAAGAACTTGTTCAAGATGGAGAC
TTACTTATCATAATCATCATTGAGCCATTGTGTTTGGGTCAGAGAAATCAAGGCATTCATTGCTGCTAA
mRNA sequenceShow/hide mRNA sequence
GAACAACCAAAATTACCACAATAAACCCTAGAGTAATGGGCGAAGAAGAAAAGGAGAGAGGGTATAATAGTAATTTGAGCGAAAAGAAAAGAGAATTTGGGAGTT
TCCTTCACTGGCCCTCCACTGGTCGTTAGTCCACCTTCAAATCGGATGCCAGTACGAAATTATTCTCTCACGTCCTTTCTTTCCACCAGCTCCCATGTCTGCTCC
ACACAAAACTGCATTTCTTCACACTTCAAACTTCACTCACCCTGTTCTTGCAGCGCCAAATGCCAGCCATGTCATGCAATTTTGCAAGACCTCAATCGTACATTC
TTGTTTTCTCTCTATAATTTACGGTTTTTTGCTTGTTTCTTCTTTGTCCATTCTTGTTCGTCGATTTCTTCCGTTTAATTATTGCTCCTTCCTTCTCCTCAATTC
TATTATGGTATCATCGGATTTGACTCTTCGTCGTATCTCTGAAACTCTGAACTGATCTCTTCCTCTTTCTTCTGGTTCATTATTGCACTTGATGCTTTCAGATTC
AACTATGGCTCGACAGGAAGATGGATGGCCATTAGGCTTGCGGCTTATGAACGCTAGAGTTGGATTGGCGGGAAATCATGATCTCTCTGCGTCGGTTTCTTTCAA
TACTTTGCTTACTCATTCTCCTAGTTCCTTCACCGACTCTTCCTCAGATCTTGATACAGAGGTCTGTTACTTCCTTTTGTCAACTGGATCATTCTACCATGATAA
GAGCATCACTCTTGGGAGTCTCATTGGAGTCTCTAGCATTTTTGAGCTATCGCGAAGATCGACGAAAGGAAATGAAGTGGAAATACTCGAAGATAAAAAGAAGTA
CAAGTCCAAACCATGGTTGTTTTCTTTATCTTTATGCATTAAACTCCGCCCTGATGCTGTGAGCTTGAACAGCTCTCCTTCACTTGAGCACTCTCTTGAAGCAGA
AAAGAGAGCTACAAGAAATCACAGGATTCACAACCCTACCCTTTATGGACCCAATGATTACTCACCTATTCGTCCTGTAACTGTTTCTGGAACAAACTCTTTGTT
TTCCAGTGATCAAGTTGCTCCTGTCTCATTTGAACCGGCGGGGGAAGAAGAAAGCAGAAGATCAAATGAAGAACTTGTTCAAGATGGAGACTTACTTATCATAAT
CATCATTGAGCCATTGTGTTTGGGTCAGAGAAATCAAGGCATTCATTGCTGCTAA
Protein sequenceShow/hide protein sequence
MLSDSTMARQEDGWPLGLRLMNARVGLAGNHDLSASVSFNTLLTHSPSSFTDSSSDLDTEVCYFLLSTGSFYHDKSITLGSLIGVSSIFELSRRSTKGNEVEILE
DKKKYKSKPWLFSLSLCIKLRPDAVSLNSSPSLEHSLEAEKRATRNHRIHNPTLYGPNDYSPIRPVTVSGTNSLFSSDQVAPVSFEPAGEEESRRSNEELVQDGD
LLIIIIIEPLCLGQRNQGIHCC