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Lsi03G021100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G021100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionmitochondrial import inner membrane translocase subunit Tim9
Genome locationchr03:32326469..32329326
RNA-Seq ExpressionLsi03G021100
SyntenyLsi03G021100
Gene Ontology termsNA
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON38573.1 Tim10/DDP family zinc finger [Parasponia andersonii]1.1e-4092.47Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+ LPEEDK++M+TMIDQLQIRDSLRMYNSLVERCFTDCID FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_004137789.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucumis sativus]1.1e-4398.92Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022145535.1 mitochondrial import inner membrane translocase subunit Tim9-like [Momordica charantia]4.6e-4294.62Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+MLADL+GLP+EDK+KMA+MIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022934857.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita moschata]3.2e-4397.85Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_042940042.1 mitochondrial import inner membrane translocase subunit Tim9 [Carya illinoinensis]2.5e-4090.32Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+MLADLE LPEEDK++M+TMI+QLQIRDSLRMYNSLVERCFTDC+D FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAAT+D
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

TrEMBL top hitse value%identityAlignment
A0A0A0LFK3 zf-Tim10_DDP domain-containing protein5.3e-4498.92Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A1S3B5G6 mitochondrial import inner membrane translocase subunit Tim95.3e-4498.92Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A5D3DN53 Mitochondrial import inner membrane translocase subunit Tim95.3e-4498.92Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1F3Y8 mitochondrial import inner membrane translocase subunit Tim91.5e-4397.85Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1IZ98 mitochondrial import inner membrane translocase subunit Tim91.5e-4397.85Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

SwissProt top hitse value%identityAlignment
O74700 Mitochondrial import inner membrane translocase subunit TIM95.3e-1746.15Show/hide
Query:  LEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L  +++ +   +++Q Q++D +R+Y++LVERCFTDC+++F    LT +E+TC+ +C+EKFLKHS RVG RF E N
Subjt:  LEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

P57745 Mitochondrial import inner membrane translocase subunit Tim93.1e-1747.44Show/hide
Query:  LEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L   ++ + + +I+  Q++D +R+Y++LVERCFTDC+++F    LT +E+TC+ RC+EKFLKHS RVG+RF E N
Subjt:  LEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

Q9XGX7 Mitochondrial import inner membrane translocase subunit Tim92.6e-4083.87Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+ML DL+GLPEEDK++MA M+DQLQIRDSLRMYNSLVERCFTDC+D F+RK+L KQEE+CVRRCAEKFLKHSMRVGMRFAELNQG AT D
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX8 Mitochondrial import inner membrane translocase subunit Tim91.2e-4083.87Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNML DL+ LPEEDK+KMA+MI+QLQIRDSLRMYN+LVERCFTDC+D+F+RK+L KQEETCV+RCAEKFLKHSMRVG+RFAELNQGAAT+D
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX9 Mitochondrial import inner membrane translocase subunit TIM91.6e-3780.65Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD +M+A L+GLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DC+D+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Arabidopsis top hitse value%identityAlignment
AT3G46560.1 Tim10/DDP family zinc finger protein1.1e-3880.65Show/hide
Query:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD +M+A L+GLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DC+D+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAACATGCTTGCTGATTTGGAGGGTCTTCCTGAAGAAGACAAGATCAAAATGGCCACCATGATCGACCAGCTCCAGATCCGAGACAGCCTGAGAATGTACAA
CTCATTGGTCGAGAGATGCTTCACAGATTGTATAGATAACTTTCAGCGAAAATCCTTGACCAAGCAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAGTTCTTGAAGC
ACTCAATGCGCGTTGGAATGAGATTTGCTGAGCTCAACCAAGGAGCCGCTACCTCAGATTAA
mRNA sequenceShow/hide mRNA sequence
TATAGGGGTTGAAGTGGGAGACAAGATCGGAATTATATAAACATTCAAGGACCATTTAGCAACAAAACCACTACTTCGCTTTCTTCAACCTACCATACTAATTTAGCTAA
TAGCGGCGATACAAGAAAAGAAACCAGAGAAGTTAAACCCTAAACCCTTTGCTTTCATTGGAATCGAAGATGGACAAGAACATGCTTGCTGATTTGGAGGGTCTTCCTGA
AGAAGACAAGATCAAAATGGCCACCATGATCGACCAGCTCCAGATCCGAGACAGCCTGAGAATGTACAACTCATTGGTCGAGAGATGCTTCACAGATTGTATAGATAACT
TTCAGCGAAAATCCTTGACCAAGCAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAGTTCTTGAAGCACTCAATGCGCGTTGGAATGAGATTTGCTGAGCTCAACCAA
GGAGCCGCTACCTCAGATTAATGTTGCATCAGAGGACACCCCGGACATATTCTCAAGACCTTCAGTTCTTTCGCCTTCTGGTTTATTAGATGTTTGAGATTATTCCATCG
CCTCAACATATAAGGAGTAAAAATTCGATCCTACAATCTTCAAGTGAGTTGTTTTAGCCAAACAGTGGTTCGTTATTTTCTTATTAAGCCAAGTATACTTATTTTGCTAA
GTGATAGAATGGCTTTTTAAGTGGTTAAAAATCCTCTTTTTTTTTTCCACTTAAAAGTACTTACAGCACTTAAAAAAAAAACCAAATCACTCTAGAACACCCGTCTCATT
GGTTATGAGGGGAAAATGCAC
Protein sequenceShow/hide protein sequence
MDKNMLADLEGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD