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Lsi03G021490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G021490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDynein light chain
Genome locationchr03:32627410..32629487
RNA-Seq ExpressionLsi03G021490
SyntenyLsi03G021490
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9455574.1 hypothetical protein C3L33_12517, partial [Rhododendron williamsianum]4.7e-1386.96Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
        MLEGKAVVRETDMP+G+QSH +ELAY+ALD HEVSDCQSIAHFIKQ
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ

KAF3449059.1 hypothetical protein FNV43_RR09783 [Rhamnella rubrinervis]4.7e-1385.11Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE
        MLEGKAVVRETDMP+ +QSHV+ELAYKALD HEVSDCQSIAH+IKQ+
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE

KGN58830.1 hypothetical protein Csa_001625 [Cucumis sativus]5.9e-16100Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ

XP_008442502.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]5.9e-16100Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ

XP_022145583.1 dynein light chain-like [Momordica charantia]1.2e-1391.3Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
        MLEGKA VRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQ
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LA26 Dynein light chain2.8e-16100Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ

A0A0B2PBT5 Dynein light chain3.8e-1381.25Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQEV
        MLEGKAVVRETDMP+G+QS+V+ELA++ALD HEVSDCQSIAHFIKQ++
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQEV

A0A1S3B5U2 Dynein light chain2.8e-16100Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
        MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ

A0A6A4LGI7 Dynein light chain (Fragment)2.3e-1386.96Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
        MLEGKAVVRETDMP+G+QSH +ELAY+ALD HEVSDCQSIAHFIKQ
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ

A0A6J1CWC6 Dynein light chain5.9e-1491.3Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ
        MLEGKA VRETDMP+GIQSHVLELAYKALD HEVSDCQSIA FIKQ
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52240.1 RHO guanyl-nucleotide exchange factor 114.5e-0651.06Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE
        MLEGKA+V ++DMP  +Q   +  A +ALD  +V DC+SIA  IK+E
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE

AT1G52240.2 RHO guanyl-nucleotide exchange factor 114.5e-0651.06Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE
        MLEGKA+V ++DMP  +Q   +  A +ALD  +V DC+SIA  IK+E
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE

AT3G16120.1 Dynein light chain type 1 family protein5.0e-0551.06Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE
        MLEGKA V ETDMP  +Q   +++A ++LD  +V D  SIA  IK+E
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE

AT4G27360.1 Dynein light chain type 1 family protein1.0e-0553.19Show/hide
Query:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE
        MLEGKAV+ +TDM Q ++   L LA KALD  +V++   IA FIK+E
Subjt:  MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCCGACTG
TCAATCTATTGCACATTTCATCAAACAGGAAGTTCCCATGTTCATCATTTCTTCCTTTTTGCTGCTTTGTGAACAATCTCATTATGATAATGAGAAAAAGGTGTTCGATA
TCAAATTACATACTATCCACTGGACCAACGCAGGTTTGACGAAGCTTATGGCCCGGCATGGCATTGTGTGGTGGGCAAAGCGTTTGGAGGTTGCATTACACATCTGTGCG
GGAGTTTCATCTTCTTCCATGTGGATAGGATGGAGTTTCTCATCTTTAAGGATGGAAGAGACTGCTGCAAAAGCGTTGAAGAGACCGTTGGAGTTGGCCAGAAATGTTAA
TCTCAGGGATCTTTATTTACATCTTCTGGTGATATCATCCATTTGCAGAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCACAGGGGATCCAGAGCCATGTCCTTGAGTTGGCTTATAAAGCACTTGATCAACACGAAGTTTCCGACTG
TCAATCTATTGCACATTTCATCAAACAGGAAGTTCCCATGTTCATCATTTCTTCCTTTTTGCTGCTTTGTGAACAATCTCATTATGATAATGAGAAAAAGGTGTTCGATA
TCAAATTACATACTATCCACTGGACCAACGCAGGTTTGACGAAGCTTATGGCCCGGCATGGCATTGTGTGGTGGGCAAAGCGTTTGGAGGTTGCATTACACATCTGTGCG
GGAGTTTCATCTTCTTCCATGTGGATAGGATGGAGTTTCTCATCTTTAAGGATGGAAGAGACTGCTGCAAAAGCGTTGAAGAGACCGTTGGAGTTGGCCAGAAATGTTAA
TCTCAGGGATCTTTATTTACATCTTCTGGTGATATCATCCATTTGCAGAGATTAAGGATAATGAGGTTACATACACTACACACAGTCAGTCTTATTGTTAGTGATATTTA
GCACTTTTATGTTTTTTTTTCTAGTACAACATGTGGGATATGGAATTTGAGAGAAGGAGTACATGTTAGTTATGGTTAAGTTATGTTCACCTTAGCTTTATTTTGTTTTG
TTTTTTGGGTTAAAATTTGAACAAGTAATAATATAGAGGCCATAAAGATTGATATTGAATTGTGGTATAGCTCTAAGTGAAAAGATTGGCCTTTTCTTAGAAAAGAAGGT
TAATAAAACAAGCTTATTAGTTAAGCAAACAGAAGACAAAAAATCAATTGCATCAACATTTGCATCAAAGAAAGCTTACATGGGTGTGACAGAAGAATAAACATCACCAT
CACCATCACCATGTTCATAACATGAAACCTTGAGAGAACATAAAATTAGAAAAGAAGAACAGGAGGAAAAGCAGAGTTACCTTGAGGGAGAGTTGATAATCTGATTGGCA
AATCCAGCATTGTCAGCAAGGAAGAGAAAAGAAAAAAGAAATAAATGGCAGAGAGTAGAGAGTTTTGACTGGGGAAGAAGCTTTGGTTTTAGAAAGAGCTGAACTTCATA
TGGAAAAGGTGCATAAAGGAGA
Protein sequenceShow/hide protein sequence
MLEGKAVVRETDMPQGIQSHVLELAYKALDQHEVSDCQSIAHFIKQEVPMFIISSFLLLCEQSHYDNEKKVFDIKLHTIHWTNAGLTKLMARHGIVWWAKRLEVALHICA
GVSSSSMWIGWSFSSLRMEETAAKALKRPLELARNVNLRDLYLHLLVISSICRD