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Lsi03G021530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G021530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationchr03:32682670..32684246
RNA-Seq ExpressionLsi03G021530
SyntenyLsi03G021530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016899678.1 PREDICTED: uncharacterized protein LOC103486348 isoform X3 [Cucumis melo]5.5e-1544.44Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH--------QAEKWFRFIRN------------REQAHVILVLQ
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS      + +N+ +  ++H        +    ++  +N            +EQ      L 
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH--------QAEKWFRFIRN------------REQAHVILVLQ

Query:  STMV-------------------LKRDGGEDDSGGASRGNWWQG
        S++                    LKRDGGEDDSGGASRGNWWQG
Subjt:  STMV-------------------LKRDGGEDDSGGASRGNWWQG
XP_016899679.1 PREDICTED: uncharacterized protein LOC103486348 isoform X4 [Cucumis melo]5.5e-1545.71Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVF---SSSFKKA-------------------IPNIRNARIRAHQAEKWFRFIRNREQAHV-----
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVF   SSSFK +                       +N    + +   +++  R     H+     
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVF---SSSFKKA-------------------IPNIRNARIRAHQAEKWFRFIRNREQAHV-----

Query:  -----ILVLQS-----TMVLKRDGGEDDSGGASRGNWWQG
             I   Q+        LKRDGGEDDSGGASRGNWWQG
Subjt:  -----ILVLQS-----TMVLKRDGGEDDSGGASRGNWWQG
XP_038905456.1 uncharacterized protein LOC120091479 isoform X1 [Benincasa hispida]1.1e-1544.6Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARIRAH------QAEKWFRFIRN------------REQAHVILVLQSTMV
        MS+KK SDGSSFSFTSDLFGT+DTS LSS HIFGP++SSSFK +  +    + +A       +    ++  +N            +EQ      L S++ 
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARIRAH------QAEKWFRFIRN------------REQAHVILVLQSTMV

Query:  ------------------LKRDGGEDDSGGASRGNWWQG
                          LKRDGGEDDSGGASRGNWWQG
Subjt:  ------------------LKRDGGEDDSGGASRGNWWQG
XP_038905457.1 uncharacterized protein LOC120091479 isoform X2 [Benincasa hispida]2.6e-1745.07Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARIRAH------QAEKWFRFIRN------------REQAHVILVLQSTMV
        MS+KK SDGSSFSFTSDLFGT+DTS LSS HIFGP++SSSFK +  +    + +A       +    ++  +N            +EQ      L S++ 
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARIRAH------QAEKWFRFIRN------------REQAHVILVLQSTMV

Query:  ------------------LKRDGGEDDSGGASRGNWWQGICR
                          LKRDGGEDDSGGASRGNWWQG CR
Subjt:  ------------------LKRDGGEDDSGGASRGNWWQGICR
XP_038905460.1 uncharacterized protein LOC120091479 isoform X3 [Benincasa hispida]1.1e-1544.93Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARIRAHQAE-----KWFRFIRN------------REQAHVILVLQSTMV-
        MS+KK SDGSSFSFTSDLFGT+DTS LSS HIFGP++SSSFK +  +    + +A           ++  +N            +EQ      L S++  
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARIRAHQAE-----KWFRFIRN------------REQAHVILVLQSTMV-

Query:  -----------------LKRDGGEDDSGGASRGNWWQG
                         LKRDGGEDDSGGASRGNWWQG
Subjt:  -----------------LKRDGGEDDSGGASRGNWWQG
TrEMBL top hitse value%identityAlignment
A0A1S3B5B7 uncharacterized protein LOC103486348 isoform X13.5e-1544.44Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH--------QAEKWFRFIRN------------REQAHVILVLQ
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS   +    +N+ +  ++H        +    ++  +N            +EQ      L 
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH--------QAEKWFRFIRN------------REQAHVILVLQ

Query:  STMV-------------------LKRDGGEDDSGGASRGNWWQG
        S++                    LKRDGGEDDSGGASRGNWWQG
Subjt:  STMV-------------------LKRDGGEDDSGGASRGNWWQG
A0A1S3B5T7 uncharacterized protein LOC103486348 isoform X25.9e-1544.76Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH-------QAEKWFRFIRN------------REQAHVILVLQS
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS   +    +N+ +  ++H            ++  +N            +EQ      L S
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH-------QAEKWFRFIRN------------REQAHVILVLQS

Query:  TMV-------------------LKRDGGEDDSGGASRGNWWQG
        ++                    LKRDGGEDDSGGASRGNWWQG
Subjt:  TMV-------------------LKRDGGEDDSGGASRGNWWQG
A0A1S4DUM2 uncharacterized protein LOC103486348 isoform X42.7e-1545.71Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVF---SSSFKKA-------------------IPNIRNARIRAHQAEKWFRFIRNREQAHV-----
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVF   SSSFK +                       +N    + +   +++  R     H+     
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVF---SSSFKKA-------------------IPNIRNARIRAHQAEKWFRFIRNREQAHV-----

Query:  -----ILVLQS-----TMVLKRDGGEDDSGGASRGNWWQG
             I   Q+        LKRDGGEDDSGGASRGNWWQG
Subjt:  -----ILVLQS-----TMVLKRDGGEDDSGGASRGNWWQG
A0A1S4DUN5 uncharacterized protein LOC103486348 isoform X32.7e-1544.44Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH--------QAEKWFRFIRN------------REQAHVILVLQ
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS      + +N+ +  ++H        +    ++  +N            +EQ      L 
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH--------QAEKWFRFIRN------------REQAHVILVLQ

Query:  STMV-------------------LKRDGGEDDSGGASRGNWWQG
        S++                    LKRDGGEDDSGGASRGNWWQG
Subjt:  STMV-------------------LKRDGGEDDSGGASRGNWWQG
A0A5D3DN19 Uncharacterized protein3.5e-1544.44Show/hide
Query:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH--------QAEKWFRFIRN------------REQAHVILVLQ
        MS+KK SDGSSFSFTSDLFG +DTSSLSSNHIFGPVFSSS   +    +N+ +  ++H        +    ++  +N            +EQ      L 
Subjt:  MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARI--RAH--------QAEKWFRFIRN------------REQAHVILVLQ

Query:  STMV-------------------LKRDGGEDDSGGASRGNWWQG
        S++                    LKRDGGEDDSGGASRGNWWQG
Subjt:  STMV-------------------LKRDGGEDDSGGASRGNWWQG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).2.7e-0429.63Show/hide
Query:  TSDGSSFSFTSDLFGTKDT-SSLSSNHIFGPVFSSSFK----------------------KAIPNIRNARIRAHQAEKWFRFIRNREQAHVILVL-----
        +S  SS S TS+LFG+++  SS SS+ I G +F    K                      K   N+   R +       ++  +  +  H+   +     
Subjt:  TSDGSSFSFTSDLFGTKDT-SSLSSNHIFGPVFSSSFK----------------------KAIPNIRNARIRAHQAEKWFRFIRNREQAHVILVL-----

Query:  ---------QSTMVLKRDGGEDDSGGASRGNWWQG
                  S    K+DGGEDDSG ASRGNWWQG
Subjt:  ---------QSTMVLKRDGGEDDSGGASRGNWWQG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATAAGAAAACATCTGATGGGTCATCTTTTTCCTTCACTTCTGATCTATTTGGGACCAAAGACACTTCTTCACTCTCATCTAATCACATTTTTGGCCCTGTATT
CTCATCTTCTTTCAAGAAGGCAATTCCAAATATAAGGAATGCAAGAATCAGAGCACATCAAGCAGAGAAATGGTTTCGTTTTATCAGGAACAGAGAGCAGGCCCATGTCA
TCTTAGTTCTTCAATCTACTATGGTGTTGAAGAGAGATGGAGGAGAAGATGATTCTGGTGGTGCTTCCAGAGGAAATTGGTGGCAAGGTATATGCCGATGA
mRNA sequenceShow/hide mRNA sequence
CAAAAATTTAAGTTGATTTAATATTATAGGTCTAAGCATTTAAAAATTATACATATAATAGGTCGGTGGGTTGCTACGATTTGTTTCTATAAATAGGTGGGTATGCAATA
CAATGGCTTTCACTAATCCTCTCCGTCTCTACTCCCTGTTTTTTGTTCTCCTTCTCCATCTAACTTCCGGCGACGGCAAGTGATTGAAGTTTTGAAAGATGTCGGATAAG
AAAACATCTGATGGGTCATCTTTTTCCTTCACTTCTGATCTATTTGGGACCAAAGACACTTCTTCACTCTCATCTAATCACATTTTTGGCCCTGTATTCTCATCTTCTTT
CAAGAAGGCAATTCCAAATATAAGGAATGCAAGAATCAGAGCACATCAAGCAGAGAAATGGTTTCGTTTTATCAGGAACAGAGAGCAGGCCCATGTCATCTTAGTTCTTC
AATCTACTATGGTGTTGAAGAGAGATGGAGGAGAAGATGATTCTGGTGGTGCTTCCAGAGGAAATTGGTGGCAAGGTATATGCCGATGAGGTGTTTGATTAAGTGTCGCA
ACCAAAATTTTATCAGTACAGCAGCCAAAATTTTGAGAACATTTACTCTTTTTTTTTTCATTGAAATTGGAAACGGACTTACGCTTCTTTATCTTCTTTCCACGATTTTC
TAAAAATGCAGGGTCGCTGTACTACTGAGAATCTCACCCCGTCATCAAGGTTTTACTTTACAAATCCTATGGTTAACTGCTATAAATATTAAACTCAAAAGGCTAGTTAA
TTAGCTATTTGATCCTTTTATTCAGAGTACTTATTCTCTGCTTCATATGCTTTTTTGCAGGTGCATGATACATACTATTGCTATAAATATAGTAATGAAGATCAATGATA
TAGAATTTTACCTGCCAAAATGAGTTTAACTCATTAGTAATGACTTGTAATTATAAGTTAGAGGTTTAAATTTTCATACCTCACATTGTATTTAAGGACATGTTATTGCC
TATTATTACATCATCCAACAAAGAACTGGTCATAGTTATCAAATAAATAATGTTTGAAGTGTATGTATATAAAATATATATTTGGTAAAGAAATGAATATGAAGACGAGG
GAATCTGGAACTGTTTGCGCA
Protein sequenceShow/hide protein sequence
MSDKKTSDGSSFSFTSDLFGTKDTSSLSSNHIFGPVFSSSFKKAIPNIRNARIRAHQAEKWFRFIRNREQAHVILVLQSTMVLKRDGGEDDSGGASRGNWWQGICR