; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G021650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G021650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA double-strand break repair rad50 ATPase, putative isoform 1
Genome locationchr03:32768909..32769112
RNA-Seq ExpressionLsi03G021650
SyntenyLsi03G021650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580503.1 hypothetical protein SDJN03_20505, partial [Cucurbita argyrosperma subsp. sororia]3.0e-1985.94Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARK+E A KGIGNVTPIQVAFIVD+YLSDN YAETRSVFRVEASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

KAG7017253.1 hypothetical protein SDJN02_19116, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-1985.94Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARK+E A KGIGNVTPIQVAFIVD+YLSDN YAETRSVFRVEASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

XP_008442481.1 PREDICTED: uncharacterized protein LOC103486335 [Cucumis melo]1.8e-1985.94Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARKS+NA+KGI NVTPIQVAFIVDRYLSDN Y ETRSVFRVEASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

XP_022934274.1 uncharacterized protein LOC111441486 [Cucurbita moschata]3.0e-1985.94Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARK+E A KGIGNVTPIQVAFIVD+YLSDN YAETRSVFRVEASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

XP_038905640.1 uncharacterized protein LOC120091608 [Benincasa hispida]1.0e-1985.94Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARKSENASKG GNVTP+QVAFIVDRYLSDN YAETRS FR+EASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

TrEMBL top hitse value%identityAlignment
A0A1S3B5S4 uncharacterized protein LOC1034863358.6e-2085.94Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARKS+NA+KGI NVTPIQVAFIVDRYLSDN Y ETRSVFRVEASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

A0A5A7TMN6 DNA double-strand break repair rad50 ATPase, putative isoform 18.6e-2085.94Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARKS+NA+KGI NVTPIQVAFIVDRYLSDN Y ETRSVFRVEASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

A0A6J1F245 uncharacterized protein LOC1114414861.5e-1985.94Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARK+E A KGIGNVTPIQVAFIVD+YLSDN YAETRSVFRVEASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

A0A6J1I1N0 uncharacterized protein LOC1114700822.5e-1984.38Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTK+RKSE+ASKG  NVTP+QVAFIVDRYLSDN YAE+RSVFRVEASSLIANSPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

A0A6J1J2B7 uncharacterized protein LOC1114820665.6e-1984.38Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS
        MGKQTKARK+E A  GIGNVTPIQVAFIVD+YLSDN YAETRSVFRVEASSLIA SPIQE   S
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37960.1 unknown protein4.5e-1359.02Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEV
        M +  +++ SE    G G VTPIQVAF+VDRYL DN +++TRS+FR EASSLI+NSP++EV
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEV

AT2G37960.2 unknown protein4.5e-1359.02Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEV
        M +  +++ SE    G G VTPIQVAF+VDRYL DN +++TRS+FR EASSLI+NSP++EV
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEV

AT3G54060.1 unknown protein2.9e-1259.02Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEV
        MGK ++++ S    K  G VTP QVAFIVDRYL DN ++ETR++FR EASSLI++SPI+ V
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEV

AT3G54060.2 unknown protein2.9e-1259.02Show/hide
Query:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEV
        MGK ++++ S    K  G VTP QVAFIVDRYL DN ++ETR++FR EASSLI++SPI+ V
Subjt:  MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGCAAACCAAAGCTAGAAAATCTGAGAACGCTAGCAAGGGGATAGGCAACGTAACCCCTATTCAGGTCGCCTTCATTGTTGATAGATATCTCTCCGAT
AACTGTTACGCCGAAACGCGCTCTGTTTTTAGAGTTGAAGCTTCATCACTCATTGCAAATTCTCCCATCCAAGAGGTACAAGTTTCTGCTTATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGCAAACCAAAGCTAGAAAATCTGAGAACGCTAGCAAGGGGATAGGCAACGTAACCCCTATTCAGGTCGCCTTCATTGTTGATAGATATCTCTCCGAT
AACTGTTACGCCGAAACGCGCTCTGTTTTTAGAGTTGAAGCTTCATCACTCATTGCAAATTCTCCCATCCAAGAGGTACAAGTTTCTGCTTATTTGTAG
Protein sequenceShow/hide protein sequence
MGKQTKARKSENASKGIGNVTPIQVAFIVDRYLSDNCYAETRSVFRVEASSLIANSPIQEVQVSAYL