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Lsi03G021690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G021690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein transport protein yos1-like
Genome locationchr03:32782173..32783497
RNA-Seq ExpressionLsi03G021690
SyntenyLsi03G021690
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR013880 - Yos1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV65485.1 hypothetical protein CFOL_v3_09000 [Cephalotus follicularis]3.2e-2358.21Show/hide
Query:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT-GFPSPPPPPVTTGAVIEIFS-------------------DLVMT
        F++F  TT SVAIP N TT  FLSPSS+ITTLSSTGLGASSAF YL G+ NC+VT  F SP P  VTTG VI IFS                   DLV+T
Subjt:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT-GFPSPPPPPVTTGAVIEIFS-------------------DLVMT

Query:  GAVMATFSDLMFCGWPMAPMYFANTVKPPSLLPL
        GAV+A FS LMF G P  P+Y A   KPPSL PL
Subjt:  GAVMATFSDLMFCGWPMAPMYFANTVKPPSLLPL

KAG5582823.1 hypothetical protein H5410_053450 [Solanum commersonii]8.3e-1965.35Show/hide
Query:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSPPPPPVTTGAVIEIFSD-LVMTGAVMATFSDLMFCGWPMAP
        FS F  T  S A+PLN TT  FLSPSS ITTLSS G GASSAF+Y  G  NCIVT F SP P  VTTGAV+ I SD LV+TGAVMA  S L F G P AP
Subjt:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSPPPPPVTTGAVIEIFSD-LVMTGAVMATFSDLMFCGWPMAP

Query:  M
        M
Subjt:  M

KHG20344.1 Lactate utilization B [Gossypium arboreum]8.6e-1660Show/hide
Query:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSPPPPPVTTGAVIEIFS-----DLVMTGAVMATFSDLMFCGW
        FS F +TT SVA P N TT  FLSPSS ITTLSS G GASSA LY+ G+ NC+VT       P VTTGAV+ IFS     DLV+TGAV+A FS   F G 
Subjt:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSPPPPPVTTGAVIEIFS-----DLVMTGAVMATFSDLMFCGW

Query:  PMAPM
        P APM
Subjt:  PMAPM

RDY00631.1 hypothetical protein CR513_16169, partial [Mucuna pruriens]3.6e-3853.7Show/hide
Query:  KMGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQEELSS------IFSDLK---------------------------------NP
        KMGFWTFLEG LLFANA AILNEDRFLA RGWTLAEM+ +RR++LKGQ++         IF+++                                  NP
Subjt:  KMGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQEELSS------IFSDLK---------------------------------NP

Query:  LF-------SNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT---GFPSPPPPP--VTTGAVIEIFS---DLVMTGAVM
         F       S F  TT S A P N TT  FLSPSSLITTLSS GLGASSAF Y  G TNCIVT    FPS PPPP  V TGAVI IFS     VMTGAVM
Subjt:  LF-------SNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT---GFPSPPPPP--VTTGAVIEIFS---DLVMTGAVM

Query:  ATFSDLMFCGWPMAPM
        A FS L+F G+P AP+
Subjt:  ATFSDLMFCGWPMAPM

XP_038906232.1 protein transport protein yos1-like [Benincasa hispida]6.6e-1697.87Show/hide
Query:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ
        MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERR+TLKGQ
Subjt:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ

TrEMBL top hitse value%identityAlignment
A0A0B0P8C7 Lactate utilization B4.1e-1660Show/hide
Query:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSPPPPPVTTGAVIEIFS-----DLVMTGAVMATFSDLMFCGW
        FS F +TT SVA P N TT  FLSPSS ITTLSS G GASSA LY+ G+ NC+VT       P VTTGAV+ IFS     DLV+TGAV+A FS   F G 
Subjt:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVTGFPSPPPPPVTTGAVIEIFS-----DLVMTGAVMATFSDLMFCGW

Query:  PMAPM
        P APM
Subjt:  PMAPM

A0A1Q3BC67 Uncharacterized protein1.6e-2358.21Show/hide
Query:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT-GFPSPPPPPVTTGAVIEIFS-------------------DLVMT
        F++F  TT SVAIP N TT  FLSPSS+ITTLSSTGLGASSAF YL G+ NC+VT  F SP P  VTTG VI IFS                   DLV+T
Subjt:  FSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT-GFPSPPPPPVTTGAVIEIFS-------------------DLVMT

Query:  GAVMATFSDLMFCGWPMAPMYFANTVKPPSLLPL
        GAV+A FS LMF G P  P+Y A   KPPSL PL
Subjt:  GAVMATFSDLMFCGWPMAPMYFANTVKPPSLLPL

A0A371HCV9 Uncharacterized protein (Fragment)1.7e-3853.7Show/hide
Query:  KMGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQEELSS------IFSDLK---------------------------------NP
        KMGFWTFLEG LLFANA AILNEDRFLA RGWTLAEM+ +RR++LKGQ++         IF+++                                  NP
Subjt:  KMGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQEELSS------IFSDLK---------------------------------NP

Query:  LF-------SNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT---GFPSPPPPP--VTTGAVIEIFS---DLVMTGAVM
         F       S F  TT S A P N TT  FLSPSSLITTLSS GLGASSAF Y  G TNCIVT    FPS PPPP  V TGAVI IFS     VMTGAVM
Subjt:  LF-------SNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYLLGSTNCIVT---GFPSPPPPP--VTTGAVIEIFS---DLVMTGAVM

Query:  ATFSDLMFCGWPMAPM
        A FS L+F G+P AP+
Subjt:  ATFSDLMFCGWPMAPM

A0A6J1F388 protein transport protein yos1-like1.3e-1491.49Show/hide
Query:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ
        MGFWTFLEGLLLFANAFAILNEDRFL+RRGWTL EMSR RR+TLKGQ
Subjt:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ

A0A6J1J7W2 protein transport protein yos1-like4.6e-1593.62Show/hide
Query:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ
        MGFWTFLEGLLLFANAFAILNEDRFL+RRGWTLAEMSR RR+TLKGQ
Subjt:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G37975.1 Yos1-like protein7.2e-1372.92Show/hide
Query:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRE-RRSTLKGQ
        MGFWT +EGLLLFANA AILNEDRFLA +GWTLAE+ +  +R++LKGQ
Subjt:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRE-RRSTLKGQ

AT3G54085.1 Yos1-like protein6.1e-1270.83Show/hide
Query:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSR-ERRSTLKGQ
        MGFWT L+GLLLFANA AILNEDRFL  RGWTL E+ + +RR++ KGQ
Subjt:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSR-ERRSTLKGQ

AT3G54085.2 Yos1-like protein6.1e-1270.83Show/hide
Query:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSR-ERRSTLKGQ
        MGFWT L+GLLLFANA AILNEDRFL  RGWTL E+ + +RR++ KGQ
Subjt:  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSR-ERRSTLKGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAAAATGGGATTCTGGACCTTCTTGGAAGGGCTTCTGCTGTTTGCAAACGCTTTTGCAATTCTGAACGAGGATCGTTTTCTTGCTCGGAGAGGATGGACATTAGC
AGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGGCAGGAAGAATTATCCAGCATATTCAGCGACCTTAAAAATCCTCTATTCTCCAACTTCTGTGCCACCACTCCCT
CCGTCGCAATTCCGCTGAATCTCACGACGGCGAATTTTCTCTCCCCTTCTTCCCTTATCACAACACTTTCATCCACTGGTTTAGGAGCCTCCTCCGCCTTCTTGTACTTG
CTAGGTAGCACAAACTGCATCGTCACCGGCTTCCCTTCGCCGCCACCGCCCCCCGTCACCACCGGAGCTGTCATCGAAATCTTCTCCGATTTGGTGATGACCGGCGCCGT
CATGGCCACCTTCTCGGACTTGATGTTCTGTGGCTGGCCAATGGCTCCGATGTATTTTGCTAATACGGTGAAGCCACCGTCTCTGTTGCCTCTGAACTGGGTCGGATCGT
AG
mRNA sequenceShow/hide mRNA sequence
ATGTTCAAAATGGGATTCTGGACCTTCTTGGAAGGGCTTCTGCTGTTTGCAAACGCTTTTGCAATTCTGAACGAGGATCGTTTTCTTGCTCGGAGAGGATGGACATTAGC
AGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGGCAGGAAGAATTATCCAGCATATTCAGCGACCTTAAAAATCCTCTATTCTCCAACTTCTGTGCCACCACTCCCT
CCGTCGCAATTCCGCTGAATCTCACGACGGCGAATTTTCTCTCCCCTTCTTCCCTTATCACAACACTTTCATCCACTGGTTTAGGAGCCTCCTCCGCCTTCTTGTACTTG
CTAGGTAGCACAAACTGCATCGTCACCGGCTTCCCTTCGCCGCCACCGCCCCCCGTCACCACCGGAGCTGTCATCGAAATCTTCTCCGATTTGGTGATGACCGGCGCCGT
CATGGCCACCTTCTCGGACTTGATGTTCTGTGGCTGGCCAATGGCTCCGATGTATTTTGCTAATACGGTGAAGCCACCGTCTCTGTTGCCTCTGAACTGGGTCGGATCGT
AG
Protein sequenceShow/hide protein sequence
MFKMGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQEELSSIFSDLKNPLFSNFCATTPSVAIPLNLTTANFLSPSSLITTLSSTGLGASSAFLYL
LGSTNCIVTGFPSPPPPPVTTGAVIEIFSDLVMTGAVMATFSDLMFCGWPMAPMYFANTVKPPSLLPLNWVGS