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Lsi03G022010 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G022010
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr03:33052847..33059396
RNA-Seq ExpressionLsi03G022010
SyntenyLsi03G022010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8006279.1 hypothetical protein BT93_K0541 [Corymbia citriodora subsp. variegata]1.1e-0740.78Show/hide
Query:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP
        +L S LL  KY+L +  +LP ++G  P N FP + R T FL FPI  G+LP         TCK  +F+  VGM+P N+F  K S V   E+L    G  P
Subjt:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP

Query:  PKL
         +L
Subjt:  PKL

KAG2589757.1 hypothetical protein PVAP13_5NG381923 [Panicum virgatum]8.4e-0531.78Show/hide
Query:  DSSRDTRLLHSPKLAGILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVS
        D S+   LL  P L  I  S+LL+    + R  + PME GI P      RY S  F+SFP+L G+ P   L       +L +F I  GM P  +      
Subjt:  DSSRDTRLLHSPKLAGILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVS

Query:  AVSWFERLAMDEGSTPPKLPTILDKDFGI
             +RL  + GS P  L +++ + F +
Subjt:  AVSWFERLAMDEGSTPPKLPTILDKDFGI

KCW71987.1 hypothetical protein EUGRSUZ_E00440 [Eucalyptus grandis]3.9e-1043Show/hide
Query:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP
        +L S LLL K+  +    LPM EG+ P N F P++R  KF S PI  G+LP  MLP     C+L +F I  G+LP  +F    S  SW E+L  + GS P
Subjt:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP

KDO39231.1 hypothetical protein CISIN_1g031187mg [Citrus sinensis]2.1e-1144.12Show/hide
Query:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP
        ++ S+L     SL+   KLP E+GI P N  P     +  LS PI  G LP  +LPS PR  KL +F IP GM P    SP V    W ER AM+ G +P
Subjt:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP

Query:  PK
        PK
Subjt:  PK

THU44325.1 hypothetical protein C4D60_Mb02t06230 [Musa balbisiana]3.2e-0432.52Show/hide
Query:  SLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSP---------KVSAVSWFERLAMDEGSTPPK
        S+ + D+ P   GI P  SF  +YR     SFP  GGI P     +  R  +L++F    GMLP +   P          +S+   F    +D     P+
Subjt:  SLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSP---------KVSAVSWFERLAMDEGSTPPK

Query:  LPTI-----LDKDFGIGPWKLLP
          TI     LD+  G GP KLLP
Subjt:  LPTI-----LDKDFGIGPWKLLP

TrEMBL top hitse value%identityAlignment
A0A059C0V7 Uncharacterized protein1.9e-1043Show/hide
Query:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP
        +L S LLL K+  +    LPM EG+ P N F P++R  KF S PI  G+LP  MLP     C+L +F I  G+LP  +F    S  SW E+L  + GS P
Subjt:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP

A0A067DKW7 Uncharacterized protein1.0e-1144.12Show/hide
Query:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP
        ++ S+L     SL+   KLP E+GI P N  P     +  LS PI  G LP  +LPS PR  KL +F IP GM P    SP V    W ER AM+ G +P
Subjt:  ILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTP

Query:  PK
        PK
Subjt:  PK

A0A4S8I8P4 Uncharacterized protein1.5e-0432.52Show/hide
Query:  SLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSP---------KVSAVSWFERLAMDEGSTPPK
        S+ + D+ P   GI P  SF  +YR     SFP  GGI P     +  R  +L++F    GMLP +   P          +S+   F    +D     P+
Subjt:  SLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSP---------KVSAVSWFERLAMDEGSTPPK

Query:  LPTI-----LDKDFGIGPWKLLP
          TI     LD+  G GP KLLP
Subjt:  LPTI-----LDKDFGIGPWKLLP

B6SXP9 Uncharacterized protein5.9e-0433.06Show/hide
Query:  LLLKYSL-VREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTPPKL--
        LLL  S+ VR D+LPM+ G+ P +    R R+ +F++ P  GGI P  +      T  ++  +   G++P+ +F  K  AV  F  +A  +G+ P KL  
Subjt:  LLLKYSL-VREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGILPFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTPPKL--

Query:  PTILDKDF-------GIGPWK
         T  +  F       GIGP K
Subjt:  PTILDKDF-------GIGPWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTCTCGAAGACCAGAGATGTTGGAAAACGACGTGGGAATAGAACCTGTGAAATTATTGCCACCACCGACAAAGTTCTGAAGATTGGGAATTTTCGAGCTTCCAA
GTCCAAGACCACAACTCTTCCGATGGTGGAATTGCAAGTAACGCCAACCCAATCACATAAACGCTTAGAATCGTTCCAAGAGCTCACGATTTTGAGCGGGTCGTTGAGTG
CCCTCAAGGAGCATGACAAGCCGATTCTCAAGATTGAGACTAGACATTCTTCCATCCATCTTGGCACAAACCCTTTAGAAGATGAAGTAGAAGTATCCTTCCTTGATTTC
TTAAGCAGAAAACATACAAAAAAGACGCTGACCAAAATAACAGTAAAGGTAACTGTAGATACTATAGAGATTAGCACCTTTGATGCTCGAGACCGCTTATTGGACGAATA
TGTTTGGTTAGATGTGCACGGAGATAGCTCAAGAGATACGAGGCTTTTGCATTCTCCTAAGCTGGCTGGTATACTTTCGTCAAGTTTGTTATTACTCAAGTATAGCTTAG
TGAGGGAAGATAAGTTACCAATGGAGGAAGGGATTGGCCCATTTAATTCATTTCCACCCAGGTACAGAAGCACCAAGTTTTTAAGCTTCCCTATATTGGGAGGGATACTA
CCATTCATAATGTTGCCTTCCACTCCAAGAACTTGCAAGTTGATCAAGTTTATAATCCCTGTAGGAATGCTCCCACTTAACATATTCTCACCCAAGGTTAGCGCTGTTAG
TTGGTTTGAAAGGTTGGCAATGGACGAAGGCAGTACTCCTCCAAAATTGCCGACGATATTAGACAAGGACTTTGGAATTGGCCCATGGAAATTATTGCCTGGACACCCAA
ATGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTCTCGAAGACCAGAGATGTTGGAAAACGACGTGGGAATAGAACCTGTGAAATTATTGCCACCACCGACAAAGTTCTGAAGATTGGGAATTTTCGAGCTTCCAA
GTCCAAGACCACAACTCTTCCGATGGTGGAATTGCAAGTAACGCCAACCCAATCACATAAACGCTTAGAATCGTTCCAAGAGCTCACGATTTTGAGCGGGTCGTTGAGTG
CCCTCAAGGAGCATGACAAGCCGATTCTCAAGATTGAGACTAGACATTCTTCCATCCATCTTGGCACAAACCCTTTAGAAGATGAAGTAGAAGTATCCTTCCTTGATTTC
TTAAGCAGAAAACATACAAAAAAGACGCTGACCAAAATAACAGTAAAGGTAACTGTAGATACTATAGAGATTAGCACCTTTGATGCTCGAGACCGCTTATTGGACGAATA
TGTTTGGTTAGATGTGCACGGAGATAGCTCAAGAGATACGAGGCTTTTGCATTCTCCTAAGCTGGCTGGTATACTTTCGTCAAGTTTGTTATTACTCAAGTATAGCTTAG
TGAGGGAAGATAAGTTACCAATGGAGGAAGGGATTGGCCCATTTAATTCATTTCCACCCAGGTACAGAAGCACCAAGTTTTTAAGCTTCCCTATATTGGGAGGGATACTA
CCATTCATAATGTTGCCTTCCACTCCAAGAACTTGCAAGTTGATCAAGTTTATAATCCCTGTAGGAATGCTCCCACTTAACATATTCTCACCCAAGGTTAGCGCTGTTAG
TTGGTTTGAAAGGTTGGCAATGGACGAAGGCAGTACTCCTCCAAAATTGCCGACGATATTAGACAAGGACTTTGGAATTGGCCCATGGAAATTATTGCCTGGACACCCAA
ATGCCTGA
Protein sequenceShow/hide protein sequence
MEFSKTRDVGKRRGNRTCEIIATTDKVLKIGNFRASKSKTTTLPMVELQVTPTQSHKRLESFQELTILSGSLSALKEHDKPILKIETRHSSIHLGTNPLEDEVEVSFLDF
LSRKHTKKTLTKITVKVTVDTIEISTFDARDRLLDEYVWLDVHGDSSRDTRLLHSPKLAGILSSSLLLLKYSLVREDKLPMEEGIGPFNSFPPRYRSTKFLSFPILGGIL
PFIMLPSTPRTCKLIKFIIPVGMLPLNIFSPKVSAVSWFERLAMDEGSTPPKLPTILDKDFGIGPWKLLPGHPNA