; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G022070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G022070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr03:33090052..33091690
RNA-Seq ExpressionLsi03G022070
SyntenyLsi03G022070
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3448904.1 hypothetical protein FNV43_RR09620 [Rhamnella rubrinervis]6.2e-14692.06Show/hide
Query:  AAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDV
        AA ASSF+GTRLP   S SGRVQARF FG +K PPKK+S KP +DRPLWYPGA APEWLDGSLVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKN+AGDV
Subjt:  AAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDV

Query:  IGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAE
        IGTRFENADVKSTPFQPY EVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQRNAE
Subjt:  IGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAE

Query:  LDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
        LDPEKRLYPGGK+FDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DT
Subjt:  LDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT

XP_004246325.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycopersicum]6.8e-14589.82Show/hide
Query:  MATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA
        MATAAA SSFIGTRLP   SGSGRVQARF FG++K+ PKK++KK I DRPLWYPGA APE+LDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKN+A
Subjt:  MATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA

Query:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR
        GD+IGTR E ADVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQR
Subjt:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS
        NAELDPEKRLYPGG +FDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DT  + S
Subjt:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS

XP_011095216.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Sesamum indicum]3.4e-14490.32Show/hide
Query:  ATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAG
        A AAAASSFIGTRLP  +SGSGRVQARF FG +KSPPKK++ KP SDRPLW+PGA AP++LDGSLVGDYGFDPFGLGKP EYLQFDLDSLDQNLAKN+AG
Subjt:  ATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAG

Query:  DVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN
        D+IGTR E++DVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN
Subjt:  DVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN

Query:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
        AELDPEKR+YPGG YFDPLGLAADPEKKA LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI+DT
Subjt:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT

XP_022151483.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Momordica charantia]8.9e-14590.49Show/hide
Query:  ATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAG
        ATAAA SSFIGTRLP  +  SGRVQARFSFGK+K+ PKKSSK+ ISDRPLW+PGA APEWLDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKNVAG
Subjt:  ATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAG

Query:  DVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN
        D+IGTRFEN+DVKSTPFQPY EVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQRN
Subjt:  DVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN

Query:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS
        AELDPEKRLYPGGK+FDPLGLA DPEKKA LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID+   SS
Subjt:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS

XP_038904041.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]1.3e-15696.81Show/hide
Query:  AAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDV
        AAAASSFIGTRLP+A +GSGRVQARFSFGKQKSPPKKSSKKP+SDRPLW+PGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDV
Subjt:  AAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDV

Query:  IGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAE
        IGTRFENADVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN E
Subjt:  IGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAE

Query:  LDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS
        LDPEKRLYPGGKYFDPLGLAADPEKK TLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT+FYSS
Subjt:  LDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS

TrEMBL top hitse value%identityAlignment
A0A3Q7I0X4 Chlorophyll a-b binding protein, chloroplastic3.3e-14589.82Show/hide
Query:  MATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA
        MATAAA SSFIGTRLP   SGSGRVQARF FG++K+ PKK++KK I DRPLWYPGA APE+LDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKN+A
Subjt:  MATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA

Query:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR
        GD+IGTR E ADVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQR
Subjt:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS
        NAELDPEKRLYPGG +FDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DT  + S
Subjt:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS

A0A6A1WHK8 Chlorophyll a-b binding protein, chloroplastic3.7e-14491.34Show/hide
Query:  AAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDV
        AAA SSF+GTRL    S SGRVQARF FG +KS P+K+S KP +DRPLWYPGA APEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKN+AGDV
Subjt:  AAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDV

Query:  IGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAE
        IGTRFE++DVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+ LIWIEVLVIGYIEFQRNAE
Subjt:  IGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAE

Query:  LDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
        LDPEKRLYPGGKYFDPLGLA+DPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
Subjt:  LDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT

A0A6I9UBH4 Chlorophyll a-b binding protein, chloroplastic1.6e-14490.32Show/hide
Query:  ATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAG
        A AAAASSFIGTRLP  +SGSGRVQARF FG +KSPPKK++ KP SDRPLW+PGA AP++LDGSLVGDYGFDPFGLGKP EYLQFDLDSLDQNLAKN+AG
Subjt:  ATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAG

Query:  DVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN
        D+IGTR E++DVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN
Subjt:  DVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN

Query:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
        AELDPEKR+YPGG YFDPLGLAADPEKKA LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI+DT
Subjt:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT

A0A6J1DCA5 Chlorophyll a-b binding protein, chloroplastic4.3e-14590.49Show/hide
Query:  ATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAG
        ATAAA SSFIGTRLP  +  SGRVQARFSFGK+K+ PKKSSK+ ISDRPLW+PGA APEWLDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKNVAG
Subjt:  ATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAG

Query:  DVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN
        D+IGTRFEN+DVKSTPFQPY EVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQRN
Subjt:  DVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRN

Query:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS
        AELDPEKRLYPGGK+FDPLGLA DPEKKA LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID+   SS
Subjt:  AELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS

A0A6N2C0L4 Chlorophyll a-b binding protein, chloroplastic3.3e-14589.82Show/hide
Query:  MATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA
        MATAAA SSFIGTRLP   SGSGRVQARF FG++K+ PKK++KK I DRPLWYPGA APE+LDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKN+A
Subjt:  MATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA

Query:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR
        GD+IGTR E ADVKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGALTVEWLTG+TWQDAGKVELVEGSSYLGQPLPFSI+TLIWIEVLVIGYIEFQR
Subjt:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS
        NAELDPEKRLYPGG +FDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTI DT  + S
Subjt:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic8.9e-3941.7Show/hide
Query:  WYPGAVAPEWLDGSLVGDYGFDPFGLGK-PAEYLQFDLDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALT
        W PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L 
Subjt:  WYPGAVAPEWLDGSLVGDYGFDPFGLGK-PAEYLQFDLDSLDQNLAKNVAGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALT

Query:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAF
         E L    W  A +   + G  ++YLG P+P+ ++ T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG + DP+K   L++ EIK+ RLA++AF
Subjt:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAF

Query:  LGFAVQAAA-TGKGPLNNWATHLSDPLHTTIIDTV
        +GF VQ +A  G GPL N ATHL+DP H  I D V
Subjt:  LGFAVQAAA-TGKGPLNNWATHLSDPLHTTIIDTV

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic2.0e-13986.83Show/hide
Query:  ATAAAASSFIGTRL-PIAQSGSGRVQARFSFGKQKSPPKKSSKKPI-SDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNV
        A AAAASS +GTR+ P    GSGR  A F FGK+K+ PKKS+KK + +DRPLWYPGA++P+WLDGSLVGDYGFDPFGLGKPAEYLQFD+DSLDQNLAKN+
Subjt:  ATAAAASSFIGTRL-PIAQSGSGRVQARFSFGKQKSPPKKSSKKPI-SDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNV

Query:  AGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQ
        AGDVIGTR E AD KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEFQ
Subjt:  AGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
        RNAELD EKRLYPGGK+FDPLGLAADPEK A LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT

Q93WD2 Chlorophyll a-b binding protein CP298.6e-6658.67Show/hide
Query:  LWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRFENADVKSTP--------FQPYNEVFGLQRFRECELIHGRWAM
        LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G V       A V++TP          PY+EVFGL RFRECELIHGRWAM
Subjt:  LWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRFENADVKSTP--------FQPYNEVFGLQRFRECELIHGRWAM

Query:  LATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA-TLQLAEIKHAR
        LA LGAL  E  TGV+W +AGKVEL +G+SY G  LPFSI+ LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL LA++ E++A  L+ AEIKHAR
Subjt:  LATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAADPEKKA-TLQLAEIKHAR

Query:  LAMVAFLGFAVQAAATGKGPLNNWA
        LAMV+F G+ VQA +TG+G L + A
Subjt:  LAMVAFLGFAVQAAATGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic1.5e-11074.44Show/hide
Query:  TAAAASSFIGTRLPIAQSGSGRVQAR--FSFGKQK--SPPKKSSK-KPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAK
        TAAAAS   G R+   + G+GRVQAR  FSFGK+K   PPKKS + +   DR +W+PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ+D D LDQNLAK
Subjt:  TAAAASSFIGTRLPIAQSGSGRVQAR--FSFGKQK--SPPKKSSK-KPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAK

Query:  NVAGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIE
        NVAGD+IG   E++++K TPFQPY EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELVEGSSYLGQPLPFS++TLIWIEVLV+GYIE
Subjt:  NVAGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT
        FQRN+ELDPEKR+YPGG YFDPLGLAADPEK  TL+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic1.3e-13385Show/hide
Query:  ATAAAASSFIGTR-LPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA
        +TAAAASS +GTR +    S S R  ARF FG +K+ PKK +K  ISDRPLW+PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKN+ 
Subjt:  ATAAAASSFIGTR-LPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA

Query:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR
        G+VIGTR E  D KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEFQR
Subjt:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
        NAELD EKRLYPGGK+FDPLGLA+DP KKA LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
Subjt:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II1.1e-11174.44Show/hide
Query:  TAAAASSFIGTRLPIAQSGSGRVQAR--FSFGKQK--SPPKKSSK-KPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAK
        TAAAAS   G R+   + G+GRVQAR  FSFGK+K   PPKKS + +   DR +W+PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ+D D LDQNLAK
Subjt:  TAAAASSFIGTRLPIAQSGSGRVQAR--FSFGKQK--SPPKKSSK-KPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAK

Query:  NVAGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIE
        NVAGD+IG   E++++K TPFQPY EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELVEGSSYLGQPLPFS++TLIWIEVLV+GYIE
Subjt:  NVAGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT
        FQRN+ELDPEKR+YPGG YFDPLGLAADPEK  TL+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II2.0e-6269.23Show/hide
Query:  TAAAASSFIGTRLPIAQSGSGRVQAR--FSFGKQK--SPPKKSSK-KPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAK
        TAAAAS   G R+   + G+GRVQAR  FSFGK+K   PPKKS + +   DR +W+PGA  PEWLDGS++GD GFDPFGLGKPAEYLQ+D D LDQNLAK
Subjt:  TAAAASSFIGTRLPIAQSGSGRVQAR--FSFGKQK--SPPKKSSK-KPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAK

Query:  NVAGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVE
        NVAGD+IG   E++++K TPFQPY EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVE
Subjt:  NVAGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II2.6e-7075Show/hide
Query:  ATAAAASSFIGTR-LPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA
        +TAAAASS +GTR +    S S R  ARF FG +K+ PKK +K  ISDRPLW+PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKN+ 
Subjt:  ATAAAASSFIGTR-LPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA

Query:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
        G+VIGTR E  D KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKV  +  SS L   L F
Subjt:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II8.9e-13585Show/hide
Query:  ATAAAASSFIGTR-LPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA
        +TAAAASS +GTR +    S S R  ARF FG +K+ PKK +K  ISDRPLW+PGA +PE+LDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKN+ 
Subjt:  ATAAAASSFIGTR-LPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVA

Query:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR
        G+VIGTR E  D KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEFQR
Subjt:  GDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
        NAELD EKRLYPGGK+FDPLGLA+DP KKA LQLAEIKHARLAMV FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
Subjt:  NAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT

AT5G01530.1 light harvesting complex photosystem II1.4e-14086.83Show/hide
Query:  ATAAAASSFIGTRL-PIAQSGSGRVQARFSFGKQKSPPKKSSKKPI-SDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNV
        A AAAASS +GTR+ P    GSGR  A F FGK+K+ PKKS+KK + +DRPLWYPGA++P+WLDGSLVGDYGFDPFGLGKPAEYLQFD+DSLDQNLAKN+
Subjt:  ATAAAASSFIGTRL-PIAQSGSGRVQARFSFGKQKSPPKKSSKKPI-SDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNV

Query:  AGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQ
        AGDVIGTR E AD KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSISTLIWIEVLVIGYIEFQ
Subjt:  AGDVIGTRFENADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
        RNAELD EKRLYPGGK+FDPLGLAADPEK A LQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACCGCCGCCGCCGCATCCTCCTTCATCGGAACTCGTCTTCCCATTGCCCAATCCGGGTCGGGTCGGGTACAAGCAAGATTTTCATTCGGCAAACAAAAAAGCCC
ACCAAAGAAATCGTCAAAAAAGCCCATTTCGGACCGGCCGCTGTGGTACCCAGGGGCCGTGGCGCCGGAGTGGCTGGATGGAAGCTTGGTGGGAGATTATGGGTTTGACC
CATTTGGGCTGGGCAAACCGGCCGAGTACTTGCAATTTGACCTGGACTCATTGGACCAGAACTTGGCTAAGAATGTGGCTGGTGATGTGATTGGTACTCGGTTCGAGAAT
GCGGATGTGAAATCCACACCGTTCCAGCCGTACAATGAGGTATTTGGATTGCAGAGGTTTCGTGAGTGCGAACTTATCCATGGAAGGTGGGCTATGTTGGCTACACTTGG
TGCCCTCACTGTTGAGTGGCTCACTGGTGTCACTTGGCAAGATGCCGGAAAGGTAGAGCTGGTGGAAGGATCCTCATATCTTGGGCAGCCACTTCCATTCTCCATATCAA
CATTGATATGGATAGAAGTTCTGGTAATTGGGTACATTGAGTTTCAAAGGAATGCTGAGCTTGATCCAGAGAAGAGACTTTACCCTGGAGGCAAATACTTTGATCCCCTT
GGCTTAGCGGCCGATCCCGAGAAGAAGGCGACACTTCAATTGGCCGAGATCAAGCACGCTCGCCTCGCCATGGTCGCGTTCCTCGGTTTCGCTGTTCAAGCTGCTGCCAC
TGGCAAAGGACCCCTCAATAACTGGGCAACCCATCTGAGTGACCCTCTCCACACCACCATTATTGATACAGTCTTCTATTCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACCGCCGCCGCCGCATCCTCCTTCATCGGAACTCGTCTTCCCATTGCCCAATCCGGGTCGGGTCGGGTACAAGCAAGATTTTCATTCGGCAAACAAAAAAGCCC
ACCAAAGAAATCGTCAAAAAAGCCCATTTCGGACCGGCCGCTGTGGTACCCAGGGGCCGTGGCGCCGGAGTGGCTGGATGGAAGCTTGGTGGGAGATTATGGGTTTGACC
CATTTGGGCTGGGCAAACCGGCCGAGTACTTGCAATTTGACCTGGACTCATTGGACCAGAACTTGGCTAAGAATGTGGCTGGTGATGTGATTGGTACTCGGTTCGAGAAT
GCGGATGTGAAATCCACACCGTTCCAGCCGTACAATGAGGTATTTGGATTGCAGAGGTTTCGTGAGTGCGAACTTATCCATGGAAGGTGGGCTATGTTGGCTACACTTGG
TGCCCTCACTGTTGAGTGGCTCACTGGTGTCACTTGGCAAGATGCCGGAAAGGTAGAGCTGGTGGAAGGATCCTCATATCTTGGGCAGCCACTTCCATTCTCCATATCAA
CATTGATATGGATAGAAGTTCTGGTAATTGGGTACATTGAGTTTCAAAGGAATGCTGAGCTTGATCCAGAGAAGAGACTTTACCCTGGAGGCAAATACTTTGATCCCCTT
GGCTTAGCGGCCGATCCCGAGAAGAAGGCGACACTTCAATTGGCCGAGATCAAGCACGCTCGCCTCGCCATGGTCGCGTTCCTCGGTTTCGCTGTTCAAGCTGCTGCCAC
TGGCAAAGGACCCCTCAATAACTGGGCAACCCATCTGAGTGACCCTCTCCACACCACCATTATTGATACAGTCTTCTATTCATCTTGAAATGGTTGAGCTCTTTGTTCTA
GCTCTGGTTTACATTTTATATTTGAAGAGGGCAAAATTGTAATTCTATTTATATCATATCATGTAAATTATTATATTTGAATTGTCTCCCAAACGATGGAGATAGGGTGG
TTGGATAAAATTTATGCATAATACATAAATATATATTTCTTTTATTGAATATTTGACATGTTATTAAATG
Protein sequenceShow/hide protein sequence
MATAAAASSFIGTRLPIAQSGSGRVQARFSFGKQKSPPKKSSKKPISDRPLWYPGAVAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGDVIGTRFEN
ADVKSTPFQPYNEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPL
GLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTVFYSS