; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G022110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G022110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGTP cyclohydrolase II
Genome locationchr03:33157468..33158743
RNA-Seq ExpressionLsi03G022110
SyntenyLsi03G022110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4352118.1 hypothetical protein G4B88_015028 [Cannabis sativa]1.2e-3843.6Show/hide
Query:  VPHRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELR
        +P+ L+D+ G+ L LG+DH R   NT + L EV AAADE + E+V VDV+F + E ++ AL+ ++D++G E+L  +E+ DS L H+RN +SL DFLDEL 
Subjt:  VPHRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELR

Query:  VTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLL-RLSESTVPVHRYNTGSCHFRRKIKGRIWRRMREKGEDS
        VTHSGDA+LG++V RN+ + HDGA + L GD  LLGV  VH+ ++ EHL +++FHR+   L R     + V    +  CH+++K K ++   + +K E +
Subjt:  VTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLL-RLSESTVPVHRYNTGSCHFRRKIKGRIWRRMREKGEDS

Query:  AAVERLKKKKE
           E  KK  E
Subjt:  AAVERLKKKKE

KAF5930813.1 hypothetical protein HYC85_031686 [Camellia sinensis]1.1e-6853.41Show/hide
Query:  MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLN
        +S+GLNNR+ +PRR+ ALE+   DE+ +A +LHHQ  +    YT  G+++H +PPELLRL +QI+R SD L EG+DLIVVHV +  +I+H G +V HRL+
Subjt:  MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLN

Query:  DIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGD
        D+AG  LALG+DH   F +T +  A+V AAADE +AE+VFVDVV  +S+S++FAL+ ++D N  E+LS +E+ DS L HDR+ + L D LDEL V H+GD
Subjt:  DIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGD

Query:  AALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFH
        AALG+DV R++F+ HDGAG+GL  D SL+ VDDVH+ ++AEHL ++  H
Subjt:  AALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFH

KUI55903.1 hypothetical protein VP1G_03314 [Valsa mali var. pyri]1.5e-3336.05Show/hide
Query:  MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQ----PDISHHGPHVP
        M  GL++     RR++ LE   +D+  V ++LHHQ  +RRR +++S K+++ +  +L RL  +    + L  +  +  +    Q+     +I  H PHVP
Subjt:  MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQ----PDISHHGPHVP

Query:  HRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVT
        H L+D++   LALG+DH     N PQ LAEV A   E + E V +DV   +  S++  L+ ++D  G E+L+ +E+ D+ L HD + + + D LD  RV 
Subjt:  HRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVT

Query:  HSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGL
        H+  AA+ +DV R++ + HD AG+GL  D  LL VD VH+ A+ EHL ++    EG L
Subjt:  HSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGL

PUZ68123.1 hypothetical protein GQ55_2G000300 [Panicum hallii var. hallii]2.7e-5446.67Show/hide
Query:  NGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDI
        +GL++ +G+ RRVAALE  GADE AVA ELHH+  +  R  +  G+L+  E  +LL L +++VRR D LG G+DL+VVHV ++ D++H G  V H L+D+
Subjt:  NGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDI

Query:  AGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGDAA
        A   L LG+DH     +  QRL EV AAA E +AE+V VDVV  + E ++ AL+H++  +G ++L  +E+ D+ L HDR+ +   D  DE RV H+  AA
Subjt:  AGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGDAA

Query:  LGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLLRL
        L +DV  ++ + HDGAG GL GD  LL  DDVH+ A+A+HL Q++   EGG LRL
Subjt:  LGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLLRL

RHN72151.1 hypothetical protein MtrunA17_Chr2g0284571 [Medicago truncatula]9.3e-3950.84Show/hide
Query:  NDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSG
        NDI  +S   G++HR  F N+ +   EVT A +ERN EIVFVDV+ FIS+ KNFALI +ID+  F++LSFNEMTD+  RHD + +  FDF DELRV H+ 
Subjt:  NDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSG

Query:  DAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHRE-----GGLLRLSESTVPVHRYNTGSCH
        + AL +DV  ++ + HDGA +  F D SL GVDDVH+ A+AEHLS+++F  E     GG    SE TV V  Y++ S H
Subjt:  DAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHRE-----GGLLRLSESTVPVHRYNTGSCH

TrEMBL top hitse value%identityAlignment
A0A2T7EJX9 Uncharacterized protein1.3e-5446.67Show/hide
Query:  NGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDI
        +GL++ +G+ RRVAALE  GADE AVA ELHH+  +  R  +  G+L+  E  +LL L +++VRR D LG G+DL+VVHV ++ D++H G  V H L+D+
Subjt:  NGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDI

Query:  AGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGDAA
        A   L LG+DH     +  QRL EV AAA E +AE+V VDVV  + E ++ AL+H++  +G ++L  +E+ D+ L HDR+ +   D  DE RV H+  AA
Subjt:  AGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGDAA

Query:  LGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLLRL
        L +DV  ++ + HDGAG GL GD  LL  DDVH+ A+A+HL Q++   EGG LRL
Subjt:  LGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLLRL

A0A396J6G8 Uncharacterized protein4.5e-3950.84Show/hide
Query:  NDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSG
        NDI  +S   G++HR  F N+ +   EVT A +ERN EIVFVDV+ FIS+ KNFALI +ID+  F++LSFNEMTD+  RHD + +  FDF DELRV H+ 
Subjt:  NDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSG

Query:  DAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHRE-----GGLLRLSESTVPVHRYNTGSCH
        + AL +DV  ++ + HDGA +  F D SL GVDDVH+ A+AEHLS+++F  E     GG    SE TV V  Y++ S H
Subjt:  DAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHRE-----GGLLRLSESTVPVHRYNTGSCH

A0A7C9DZC8 Uncharacterized protein2.4e-4849.74Show/hide
Query:  MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLN
        M +GLNNR GS  RV ALEH  AD+H++A +LHHQ  IRRRR+ T G+L+H +PP+LL L +QI RR DLL +G+ LI+VHVPQ PD++HH PHV + L+
Subjt:  MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLN

Query:  DIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRV
        D++  SL LGS+H   F++  +RL ++ AA ++ + E++ VDVV  +   +N   + I+D+NGF++L  NEM +S LRHDR+ +     L+ELRV
Subjt:  DIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRV

A0A7J6E168 Uncharacterized protein5.9e-3943.6Show/hide
Query:  VPHRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELR
        +P+ L+D+ G+ L LG+DH R   NT + L EV AAADE + E+V VDV+F + E ++ AL+ ++D++G E+L  +E+ DS L H+RN +SL DFLDEL 
Subjt:  VPHRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELR

Query:  VTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLL-RLSESTVPVHRYNTGSCHFRRKIKGRIWRRMREKGEDS
        VTHSGDA+LG++V RN+ + HDGA + L GD  LLGV  VH+ ++ EHL +++FHR+   L R     + V    +  CH+++K K ++   + +K E +
Subjt:  VTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLL-RLSESTVPVHRYNTGSCHFRRKIKGRIWRRMREKGEDS

Query:  AAVERLKKKKE
           E  KK  E
Subjt:  AAVERLKKKKE

A0A7J7FR66 Uncharacterized protein5.4e-6953.41Show/hide
Query:  MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLN
        +S+GLNNR+ +PRR+ ALE+   DE+ +A +LHHQ  +    YT  G+++H +PPELLRL +QI+R SD L EG+DLIVVHV +  +I+H G +V HRL+
Subjt:  MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLN

Query:  DIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGD
        D+AG  LALG+DH   F +T +  A+V AAADE +AE+VFVDVV  +S+S++FAL+ ++D N  E+LS +E+ DS L HDR+ + L D LDEL V H+GD
Subjt:  DIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGD

Query:  AALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFH
        AALG+DV R++F+ HDGAG+GL  D SL+ VDDVH+ ++AEHL ++  H
Subjt:  AALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAACGGCCTGAACAATCGCTCTGGCTCGCCTCGCCGGGTCGCCGCTCTTGAACACACCGGAGCCGACGAACACGCCGTCGCAACCGAGCTGCATCATCAGTGCTG
CATCCGCCGGCGTCGCTACACCACCAGCGGCAAATTGAACCACTGGGAGCCTCCCGAGCTGCTTCGTTTGCAGAACCAAATCGTACGGCGCAGCGATCTTCTTGGCGAAG
GTAAAGACCTCATCGTCGTCCATGTTCCTCAACAACCTGATATCTCCCATCACGGACCGCACGTGCCGCACCGCCTCAATGATATTGCCGGTACCAGCCTCGCCCTTGGT
TCTGATCATCGCCGCCCCTTCACGAATACGCCGCAGCGCCTCGCCGAGGTTACGGCAGCCGCAGACGAAAGGAATGCGGAAATTGTGTTTGTTGATGTGGTTTTCTTCAT
CAGCGAGAGTAAGAACTTCGCTCTCATCCACATAATCGATACCAATGGCTTCGAGAATCTGAGCTTCAACGAAATGACCGATTCGAGCCTTCGCCATGACCGGAATCGTA
ACAGCTTGTTTGATTTCCTTGATGAGTTGAGGGTCACTCATTCTGGCGACGCCGCCTTGGGCTCGGATGTCTGCAGGAACTCTTTCAAGAGCCATGACGGCGCAGGCTCC
GGCCTCTTCGGCGACACGAGCCTGCTCGGCGTTGACGACGTCCATAATTACGCCTCCGCGGAGCATTTGAGCCAATCCAACTTTCACAGAGAAGGGGGATTGCTTCGTCT
CAGTGAGAGCACCGTTCCCGTACACCGCTACAACACCGGATCCTGCCATTTTCGCCGGAAAATAAAGGGAAGAATATGGCGGCGTATGAGAGAAAAGGGTGAAGATTCAG
CCGCAGTGGAAAGGCTGAAGAAGAAGAAGGAAGTGACGAGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTAACGGCCTGAACAATCGCTCTGGCTCGCCTCGCCGGGTCGCCGCTCTTGAACACACCGGAGCCGACGAACACGCCGTCGCAACCGAGCTGCATCATCAGTGCTG
CATCCGCCGGCGTCGCTACACCACCAGCGGCAAATTGAACCACTGGGAGCCTCCCGAGCTGCTTCGTTTGCAGAACCAAATCGTACGGCGCAGCGATCTTCTTGGCGAAG
GTAAAGACCTCATCGTCGTCCATGTTCCTCAACAACCTGATATCTCCCATCACGGACCGCACGTGCCGCACCGCCTCAATGATATTGCCGGTACCAGCCTCGCCCTTGGT
TCTGATCATCGCCGCCCCTTCACGAATACGCCGCAGCGCCTCGCCGAGGTTACGGCAGCCGCAGACGAAAGGAATGCGGAAATTGTGTTTGTTGATGTGGTTTTCTTCAT
CAGCGAGAGTAAGAACTTCGCTCTCATCCACATAATCGATACCAATGGCTTCGAGAATCTGAGCTTCAACGAAATGACCGATTCGAGCCTTCGCCATGACCGGAATCGTA
ACAGCTTGTTTGATTTCCTTGATGAGTTGAGGGTCACTCATTCTGGCGACGCCGCCTTGGGCTCGGATGTCTGCAGGAACTCTTTCAAGAGCCATGACGGCGCAGGCTCC
GGCCTCTTCGGCGACACGAGCCTGCTCGGCGTTGACGACGTCCATAATTACGCCTCCGCGGAGCATTTGAGCCAATCCAACTTTCACAGAGAAGGGGGATTGCTTCGTCT
CAGTGAGAGCACCGTTCCCGTACACCGCTACAACACCGGATCCTGCCATTTTCGCCGGAAAATAAAGGGAAGAATATGGCGGCGTATGAGAGAAAAGGGTGAAGATTCAG
CCGCAGTGGAAAGGCTGAAGAAGAAGAAGGAAGTGACGAGAAATTGAGGCAGAGAGAGGTGGTTTAAGTAAAGGATGTTCTCGAATGATCTTATCGAGAAGAGAAGCGTA
GTCCACACGTCAAGCCTACGCGCGTGGAATAGAAGATAGTGAGGCCCATTGAGTCGTTAATCGTTGAAAAAGGTATTCGAATCCAACGGCTGAAAATAAGAGATCAGGGA
GCGTTACAATGGACGTGGTTTCCATGTTTATTAGCTCCAATTGAAGCCACGCATTTTGATGACTGAAGCCCTCGTTTTGCGCACTCTGGAGTTTTGATACGTGGCAACCG
CTGGTTCGCTGGGTTCGTTTTCCTTCTTCTTTTATTTATTTATTTTTTTGAAATTACAGAATCACG
Protein sequenceShow/hide protein sequence
MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALG
SDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGS
GLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLLRLSESTVPVHRYNTGSCHFRRKIKGRIWRRMREKGEDSAAVERLKKKKEVTRN