; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi03G022600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi03G022600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTPRXL protein
Genome locationchr03:33536219..33536815
RNA-Seq ExpressionLsi03G022600
SyntenyLsi03G022600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN66732.1 hypothetical protein VITISV_032666 [Vitis vinifera]4.7e-2841.84Show/hide
Query:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY--YSISESMPVPQPTWSTTAPSVLRSP----VA
        ++RRS +R+  + + IN+AEARR++A AL LHRSS SSP+S + S    S  Y     K  +    Y  YS+ E++P+P+PTWSTT P++  +P      
Subjt:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY--YSISESMPVPQPTWSTTAPSVLRSP----VA

Query:  PMEEQEMFEWGDG-QASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNN
        P+ E   FEW +   ASYAWWLGFLK+LD  S+ +++Y      + V  +S +  Q QDG   GE+  L+A+D +S+ DEWL+IP  ED   + N+
Subjt:  PMEEQEMFEWGDG-QASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNN

EOY07033.1 Uncharacterized protein TCM_021567 [Theobroma cacao]4.7e-2844.85Show/hide
Query:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFE-------KKPIFSGSY--YSISES--MPVPQPTWSTTAPSVL
        ++RRSHTRK+ + +VINMAEARR+IA AL LHRSS SS  S++++  +       E E        KP  + SY  YS++E+  MPVP P WSTT PSV 
Subjt:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFE-------KKPIFSGSY--YSISES--MPVPQPTWSTTAPSVL

Query:  RSPVAPMEEQEMFEWGDGQA-SYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGED
         +P +  E  E FEWG+ +A SY WWL FL+ALDVN+   TE+  A   + +  +SMVL +           F+ ASD  +  DEWL+ P  ED
Subjt:  RSPVAPMEEQEMFEWGDGQA-SYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGED

KAA0044211.1 TPRXL protein [Cucumis melo var. makuwa]9.1e-8889.42Show/hide
Query:  EAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPMEEQEMFEWGDGQA
        EAVINMAEARRQIA+ALQLHRSSLSS F TTTSMAEPSGCYV +FEKKPI SGS    YSI ESMPVPQPTWSTT PSV+RSPVAPMEEQE+FEWGDGQA
Subjt:  EAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPMEEQEMFEWGDGQA

Query:  SYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN
        SYAWWLGFLKALDVNSSN+TEY+NA  GSAVGMSSMVLTQCQDGL SGEALFLEASDHTS ADEWLIIPIGEDGGFIDNNCLGNDLASN
Subjt:  SYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN

KAG6580440.1 hypothetical protein SDJN03_20442, partial [Cucurbita argyrosperma subsp. sororia]1.7e-8985.57Show/hide
Query:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPME
        MKRRSHTRK+PRE+V+ MAEARRQIAQALQLHRSS++S FSTT SMAEP GC   +FEKK +FSGS    YSI ESMPVPQPTWSTTAPSVLRSP APME
Subjt:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPME

Query:  EQEMFEWGDGQASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLAS
        EQE+FEWGDGQASYAWWLGFLKALDV+SSNDTEY NAG+G+AVGMSSMVLTQCQDGL SGEALFLEASD+TSF DEWLIIPIGEDGGFIDNNCLGNDLAS
Subjt:  EQEMFEWGDGQASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLAS

Query:  N
        N
Subjt:  N

KGN58710.1 hypothetical protein Csa_002623 [Cucumis sativus]1.1e-9390Show/hide
Query:  KRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPMEE
        KRRSHTRKVP EAVINMAEARRQIA+ALQLHRSSLSS  STTTSMAEPSGCYV +FEKKPI SGS    YSI ESMPVPQPTWSTT PSV+RSPVAPMEE
Subjt:  KRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPMEE

Query:  QEMFEWGDGQASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN
        QE+FEWGDGQASYAWWLGFLKALDVN SNDTEY+NAGSGSAVGMSSMVLT+CQDGL SGEALFLEASDHTS ADEWLIIPIGEDGGFIDNNCLGNDLASN
Subjt:  QEMFEWGDGQASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN

TrEMBL top hitse value%identityAlignment
A0A061EQS8 Uncharacterized protein2.3e-2844.85Show/hide
Query:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFE-------KKPIFSGSY--YSISES--MPVPQPTWSTTAPSVL
        ++RRSHTRK+ + +VINMAEARR+IA AL LHRSS SS  S++++  +       E E        KP  + SY  YS++E+  MPVP P WSTT PSV 
Subjt:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFE-------KKPIFSGSY--YSISES--MPVPQPTWSTTAPSVL

Query:  RSPVAPMEEQEMFEWGDGQA-SYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGED
         +P +  E  E FEWG+ +A SY WWL FL+ALDVN+   TE+  A   + +  +SMVL +           F+ ASD  +  DEWL+ P  ED
Subjt:  RSPVAPMEEQEMFEWGDGQA-SYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGED

A0A0A0L9R9 Uncharacterized protein5.4e-9490Show/hide
Query:  KRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPMEE
        KRRSHTRKVP EAVINMAEARRQIA+ALQLHRSSLSS  STTTSMAEPSGCYV +FEKKPI SGS    YSI ESMPVPQPTWSTT PSV+RSPVAPMEE
Subjt:  KRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPMEE

Query:  QEMFEWGDGQASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN
        QE+FEWGDGQASYAWWLGFLKALDVN SNDTEY+NAGSGSAVGMSSMVLT+CQDGL SGEALFLEASDHTS ADEWLIIPIGEDGGFIDNNCLGNDLASN
Subjt:  QEMFEWGDGQASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN

A0A2N9G9P4 Uncharacterized protein1.8e-2845.41Show/hide
Query:  RRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY--YSISES--MPVPQPTWSTTAPSVLRSPVAP---
        RR HTRK  ++ VINM +ARR+IA ALQLHRSS SS  +TTT     +  ++     +P F+G+   YS+ ES  MP+P+P WSTTAPS+L +P  P   
Subjt:  RRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY--YSISES--MPVPQPTWSTTAPSVLRSPVAP---

Query:  -MEEQEMFEWGD-GQASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNN
         ME  E FEWG+  QAS+ WWLGFL+ LD   + + +Y        +G S +V +Q    L  GE  F++ SD + F DEWLI P  ED G + N+
Subjt:  -MEEQEMFEWGD-GQASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNN

A0A5A7TRK0 TPRXL protein4.4e-8889.42Show/hide
Query:  EAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPMEEQEMFEWGDGQA
        EAVINMAEARRQIA+ALQLHRSSLSS F TTTSMAEPSGCYV +FEKKPI SGS    YSI ESMPVPQPTWSTT PSV+RSPVAPMEEQE+FEWGDGQA
Subjt:  EAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY---YSISESMPVPQPTWSTTAPSVLRSPVAPMEEQEMFEWGDGQA

Query:  SYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN
        SYAWWLGFLKALDVNSSN+TEY+NA  GSAVGMSSMVLTQCQDGL SGEALFLEASDHTS ADEWLIIPIGEDGGFIDNNCLGNDLASN
Subjt:  SYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN

A5AGY2 Uncharacterized protein2.3e-2841.84Show/hide
Query:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY--YSISESMPVPQPTWSTTAPSVLRSP----VA
        ++RRS +R+  + + IN+AEARR++A AL LHRSS SSP+S + S    S  Y     K  +    Y  YS+ E++P+P+PTWSTT P++  +P      
Subjt:  MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSY--YSISESMPVPQPTWSTTAPSVLRSP----VA

Query:  PMEEQEMFEWGDG-QASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNN
        P+ E   FEW +   ASYAWWLGFLK+LD  S+ +++Y      + V  +S +  Q QDG   GE+  L+A+D +S+ DEWL+IP  ED   + N+
Subjt:  PMEEQEMFEWGDG-QASYAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGAAGGTCCCACACTAGGAAGGTTCCAAGGGAAGCTGTAATCAATATGGCGGAGGCTAGAAGACAGATAGCTCAAGCTTTGCAACTTCACAGATCGTCGTTGTC
GTCTCCGTTTTCGACGACAACGTCTATGGCTGAACCAAGTGGCTGCTATGTCTGTGAGTTTGAGAAAAAGCCCATATTTTCAGGTTCTTACTATTCGATATCGGAGTCTA
TGCCAGTTCCTCAACCGACATGGTCAACCACAGCACCTTCTGTGCTGCGTTCGCCAGTGGCACCAATGGAAGAGCAGGAAATGTTTGAGTGGGGAGATGGGCAAGCTTCT
TACGCTTGGTGGCTTGGATTTTTGAAGGCTTTGGATGTTAATAGCAGCAACGACACAGAGTATCAAAATGCAGGGAGTGGAAGTGCGGTGGGGATGAGCTCAATGGTGTT
GACTCAGTGTCAGGATGGCTTGGGAAGTGGAGAAGCACTGTTTCTGGAAGCGAGTGACCACACCTCGTTTGCAGATGAATGGTTGATAATTCCAATTGGTGAAGACGGGG
GGTTTATTGATAACAATTGCCTTGGGAATGATTTGGCATCTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGAAGGTCCCACACTAGGAAGGTTCCAAGGGAAGCTGTAATCAATATGGCGGAGGCTAGAAGACAGATAGCTCAAGCTTTGCAACTTCACAGATCGTCGTTGTC
GTCTCCGTTTTCGACGACAACGTCTATGGCTGAACCAAGTGGCTGCTATGTCTGTGAGTTTGAGAAAAAGCCCATATTTTCAGGTTCTTACTATTCGATATCGGAGTCTA
TGCCAGTTCCTCAACCGACATGGTCAACCACAGCACCTTCTGTGCTGCGTTCGCCAGTGGCACCAATGGAAGAGCAGGAAATGTTTGAGTGGGGAGATGGGCAAGCTTCT
TACGCTTGGTGGCTTGGATTTTTGAAGGCTTTGGATGTTAATAGCAGCAACGACACAGAGTATCAAAATGCAGGGAGTGGAAGTGCGGTGGGGATGAGCTCAATGGTGTT
GACTCAGTGTCAGGATGGCTTGGGAAGTGGAGAAGCACTGTTTCTGGAAGCGAGTGACCACACCTCGTTTGCAGATGAATGGTTGATAATTCCAATTGGTGAAGACGGGG
GGTTTATTGATAACAATTGCCTTGGGAATGATTTGGCATCTAACTAA
Protein sequenceShow/hide protein sequence
MKRRSHTRKVPREAVINMAEARRQIAQALQLHRSSLSSPFSTTTSMAEPSGCYVCEFEKKPIFSGSYYSISESMPVPQPTWSTTAPSVLRSPVAPMEEQEMFEWGDGQAS
YAWWLGFLKALDVNSSNDTEYQNAGSGSAVGMSSMVLTQCQDGLGSGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN