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Lsi04G000100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G000100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:156028..157584
RNA-Seq ExpressionLsi04G000100
SyntenyLsi04G000100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAD4888433.1 hypothetical protein E3N88_20506 [Mikania micrantha]5.0e-1373.33Show/hide
Query:  TREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPG
        T  DG  I+   D   GPGFESNRPSLSSQGEARNS KC  FN+SAAQEVGLAAPPTR G
Subjt:  TREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPG

KAD4888435.1 hypothetical protein E3N88_20508 [Mikania micrantha]2.2e-2441.92Show/hide
Query:  RIEITNDGWRLSLEHVQCLALVSFAYDCLEWSSYRFRGIVPLWAPNTLVETKSPSRHREEISTSGSPLDHPSLSPELVERDEFVPHTFYNLRIETPNP--
        RIEITNDGWRL +EHV+ LAL+SFA                                  E +  G+P+D          ++E   +    LR+E   P  
Subjt:  RIEITNDGWRLSLEHVQCLALVSFAYDCLEWSSYRFRGIVPLWAPNTLVETKSPSRHREEISTSGSPLDHPSLSPELVERDEFVPHTFYNLRIETPNP--

Query:  -----LNFRLELRKRARPRRGGLD--------GTREDGWIIEL-GADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRR
             + + +EL  +  P   G+D          R+   I  L G  +  GPGFESNRPS   + EARNS KC  FN+SAAQEVGLAAPPT  GVDS   
Subjt:  -----LNFRLELRKRARPRRGGLD--------GTREDGWIIEL-GADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRR

Query:  EGRAEPHLAVGGFSLLGRGFQTGLKGGGI
         GRAE  LAVG  SLLGR  QTGLKGGGI
Subjt:  EGRAEPHLAVGGFSLLGRGFQTGLKGGGI

KAD4981915.1 hypothetical protein E3N88_18586 [Mikania micrantha]3.9e-1367.16Show/hide
Query:  TREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRRE
        T  DG  I+   D   GPGFESNRPSLSSQGEARNS KC  FN+SAAQEVGLAAPPTR G   +  E
Subjt:  TREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRRE

KAF1856895.1 hypothetical protein Lal_00001891 [Lupinus albus]2.4e-1553.6Show/hide
Query:  LNFRLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFS
        L  RLELRKRARPR GGL GT              EGPGFESNRPSLSSQGEA  S                ++   R G+ SR   GRAEPHLAVG FS
Subjt:  LNFRLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFS

Query:  LLGRGFQTGLKGGGIPYSNLTGDSS
        LLGR      KGGG+  S+LTGDSS
Subjt:  LLGRGFQTGLKGGGIPYSNLTGDSS

KAF1893125.1 hypothetical protein Lal_00015556 [Lupinus albus]3.7e-1654.4Show/hide
Query:  LNFRLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFS
        L  RLELRKRARPR GGL GTR             EGPGFESNRPSLSSQGEA  S                ++   R G+ SR   GRAEPHLAVG FS
Subjt:  LNFRLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFS

Query:  LLGRGFQTGLKGGGIPYSNLTGDSS
        LLGR      KGGG+  S+LTGDSS
Subjt:  LLGRGFQTGLKGGGIPYSNLTGDSS

TrEMBL top hitse value%identityAlignment
A0A5N6NJ20 Uncharacterized protein2.4e-1373.33Show/hide
Query:  TREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPG
        T  DG  I+   D   GPGFESNRPSLSSQGEARNS KC  FN+SAAQEVGLAAPPTR G
Subjt:  TREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPG

A0A5N6NJT0 Uncharacterized protein1.1e-2441.92Show/hide
Query:  RIEITNDGWRLSLEHVQCLALVSFAYDCLEWSSYRFRGIVPLWAPNTLVETKSPSRHREEISTSGSPLDHPSLSPELVERDEFVPHTFYNLRIETPNP--
        RIEITNDGWRL +EHV+ LAL+SFA                                  E +  G+P+D          ++E   +    LR+E   P  
Subjt:  RIEITNDGWRLSLEHVQCLALVSFAYDCLEWSSYRFRGIVPLWAPNTLVETKSPSRHREEISTSGSPLDHPSLSPELVERDEFVPHTFYNLRIETPNP--

Query:  -----LNFRLELRKRARPRRGGLD--------GTREDGWIIEL-GADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRR
             + + +EL  +  P   G+D          R+   I  L G  +  GPGFESNRPS   + EARNS KC  FN+SAAQEVGLAAPPT  GVDS   
Subjt:  -----LNFRLELRKRARPRRGGLD--------GTREDGWIIEL-GADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRR

Query:  EGRAEPHLAVGGFSLLGRGFQTGLKGGGI
         GRAE  LAVG  SLLGR  QTGLKGGGI
Subjt:  EGRAEPHLAVGGFSLLGRGFQTGLKGGGI

A0A5N6NMJ0 Uncharacterized protein1.9e-1367.16Show/hide
Query:  TREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRRE
        T  DG  I+   D   GPGFESNRPSLSSQGEARNS KC  FN+SAAQEVGLAAPPTR G   +  E
Subjt:  TREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRRE

A0A6A5L9Z5 Uncharacterized protein1.2e-1553.6Show/hide
Query:  LNFRLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFS
        L  RLELRKRARPR GGL GT              EGPGFESNRPSLSSQGEA  S                ++   R G+ SR   GRAEPHLAVG FS
Subjt:  LNFRLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFS

Query:  LLGRGFQTGLKGGGIPYSNLTGDSS
        LLGR      KGGG+  S+LTGDSS
Subjt:  LLGRGFQTGLKGGGIPYSNLTGDSS

A0A6A5P6N5 Uncharacterized protein1.8e-1654.4Show/hide
Query:  LNFRLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFS
        L  RLELRKRARPR GGL GTR             EGPGFESNRPSLSSQGEA  S                ++   R G+ SR   GRAEPHLAVG FS
Subjt:  LNFRLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFS

Query:  LLGRGFQTGLKGGGIPYSNLTGDSS
        LLGR      KGGG+  S+LTGDSS
Subjt:  LLGRGFQTGLKGGGIPYSNLTGDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTCATGGGCTCACCAATGGAAGGATTGAGATTACTAATGACGGATGGAGGTTGAGTCTCGAGCATGTTCAGTGCCTCGCCCTTGTCTCCTTCGCCTACGACTG
CTTAGAATGGTCATCCTATCGATTCAGAGGCATAGTCCCTCTCTGGGCCCCCAACACACTCGTCGAGACGAAATCACCCTCTCGCCATAGAGAAGAGATCTCGACGTCTG
GGTCCCCTCTCGATCACCCTTCCCTTTCACCTGAACTGGTCGAGAGAGATGAATTCGTACCACATACATTTTATAACCTTCGAATCGAAACCCCCAACCCGCTGAACTTT
AGACTCGAGTTGAGAAAGAGGGCTAGGCCCAGGAGAGGAGGGCTTGATGGGACTAGGGAAGACGGGTGGATTATAGAGCTAGGGGCAGATTGGATCGAAGGTCCAGGATT
CGAGTCAAATCGACCTTCCCTCTCATCTCAGGGTGAGGCAAGGAATTCCATCAAATGTTTGTTGTTCAATATCTCGGCTGCTCAAGAAGTTGGACTAGCTGCTCCTCCGA
CCCGACCCGGAGTGGATTCTAGGAGAAGGGAAGGGCGGGCAGAGCCTCACCTTGCAGTAGGAGGGTTTTCGTTGCTGGGACGGGGGTTTCAAACAGGACTGAAGGGAGGA
GGAATTCCATACTCCAATCTTACTGGGGATTCAAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAACTCATGGGCTCACCAATGGAAGGATTGAGATTACTAATGACGGATGGAGGTTGAGTCTCGAGCATGTTCAGTGCCTCGCCCTTGTCTCCTTCGCCTACGACTG
CTTAGAATGGTCATCCTATCGATTCAGAGGCATAGTCCCTCTCTGGGCCCCCAACACACTCGTCGAGACGAAATCACCCTCTCGCCATAGAGAAGAGATCTCGACGTCTG
GGTCCCCTCTCGATCACCCTTCCCTTTCACCTGAACTGGTCGAGAGAGATGAATTCGTACCACATACATTTTATAACCTTCGAATCGAAACCCCCAACCCGCTGAACTTT
AGACTCGAGTTGAGAAAGAGGGCTAGGCCCAGGAGAGGAGGGCTTGATGGGACTAGGGAAGACGGGTGGATTATAGAGCTAGGGGCAGATTGGATCGAAGGTCCAGGATT
CGAGTCAAATCGACCTTCCCTCTCATCTCAGGGTGAGGCAAGGAATTCCATCAAATGTTTGTTGTTCAATATCTCGGCTGCTCAAGAAGTTGGACTAGCTGCTCCTCCGA
CCCGACCCGGAGTGGATTCTAGGAGAAGGGAAGGGCGGGCAGAGCCTCACCTTGCAGTAGGAGGGTTTTCGTTGCTGGGACGGGGGTTTCAAACAGGACTGAAGGGAGGA
GGAATTCCATACTCCAATCTTACTGGGGATTCAAGCTAG
Protein sequenceShow/hide protein sequence
MQTHGLTNGRIEITNDGWRLSLEHVQCLALVSFAYDCLEWSSYRFRGIVPLWAPNTLVETKSPSRHREEISTSGSPLDHPSLSPELVERDEFVPHTFYNLRIETPNPLNF
RLELRKRARPRRGGLDGTREDGWIIELGADWIEGPGFESNRPSLSSQGEARNSIKCLLFNISAAQEVGLAAPPTRPGVDSRRREGRAEPHLAVGGFSLLGRGFQTGLKGG
GIPYSNLTGDSS