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Lsi04G000210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G000210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionauxin-regulated gene involved in organ size
Genome locationchr04:311521..311775
RNA-Seq ExpressionLsi04G000210
SyntenyLsi04G000210
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5742459.1 putative transmembrane protein [Tripterygium wilfordii]1.7e-1476.92Show/hide
Query:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV
        MVRCF++ SV+VLAAVA SMVVLPL+LPPLPPPPL+LLFFPVGIM AL+ LAFSP ++  GNVVV
Subjt:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV

KAG2372512.1 uncharacterized protein HKW66_Vig0206190 [Vigna angularis]1.3e-1483.08Show/hide
Query:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV
        MVRCF+L SVL+LAA+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAFSPSD   GN VV
Subjt:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV

KAG6601123.1 Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. sororia]4.3e-2385.9Show/hide
Query:  AAAQGYDPISRCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGN
        AAAQG+D IS  RKIAMVRCFNLVS+ VLAAVAVSMVVL LVLPPLPPPP+VLLFFPVG+MAALL+LAFSPSDVGV N
Subjt:  AAAQGYDPISRCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGN

RDX63473.1 hypothetical protein CR513_58094, partial [Mucuna pruriens]9.7e-1577.78Show/hide
Query:  RCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGV-GNVVV
        R R  AMVR F  +S+L+LAAVA SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAF+PSDV V  NVVV
Subjt:  RCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGV-GNVVV

XP_007148923.1 hypothetical protein PHAVU_005G025500g [Phaseolus vulgaris]1.7e-1487.72Show/hide
Query:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSD
        MVRCF+L SVL+LAA+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAFSPSD
Subjt:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSD

TrEMBL top hitse value%identityAlignment
A0A0L9UI81 Uncharacterized protein6.1e-1583.08Show/hide
Query:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV
        MVRCF+L SVL+LAA+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAFSPSD   GN VV
Subjt:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV

A0A0S3SKI1 Uncharacterized protein6.1e-1583.08Show/hide
Query:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV
        MVRCF+L SVL+LAA+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAFSPSD   GN VV
Subjt:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV

A0A371EBR9 Uncharacterized protein (Fragment)4.7e-1577.78Show/hide
Query:  RCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGV-GNVVV
        R R  AMVR F  +S+L+LAAVA SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAF+PSDV V  NVVV
Subjt:  RCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGV-GNVVV

A0A7J7D881 Putative transmembrane protein8.0e-1576.92Show/hide
Query:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV
        MVRCF++ SV+VLAAVA SMVVLPL+LPPLPPPPL+LLFFPVGIM AL+ LAFSP ++  GNVVV
Subjt:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV

V7BSD6 Uncharacterized protein8.0e-1587.72Show/hide
Query:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSD
        MVRCF+L SVL+LAA+A SMVVLPL+LPPLPPPPLVLLFFPVGIMAAL+LLAFSPSD
Subjt:  MVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSD

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE3.5e-0749.21Show/hide
Query:  SRCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPS
        S+ R +     F+L S+++L  +  S+++LPLVLPPLPPPP +LL  P+GIM  L++LAF PS
Subjt:  SRCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPS

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.3e-0650.82Show/hide
Query:  FNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV
        F+L S+ +L  +  S+++LPLVLPPLPPPP +LL  P+GIM  L++LAF PS     N  V
Subjt:  FNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE1.5e-0553.85Show/hide
Query:  FNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPS
        F++ S+L+L  V  S+V+LPLVLPPLPPPP +L+  PV ++  LL LAF P+
Subjt:  FNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPS

Q8RXL7 ARGOS-like protein1.6e-0750Show/hide
Query:  RKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPS
        R++     F+L S++VL  +  S+++LPL+LPPLPPPP +LL  P+GIM  L++LAF PS
Subjt:  RKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPS

Arabidopsis top hitse value%identityAlignment
AT2G41230.1 unknown protein4.8e-0448.98Show/hide
Query:  SVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSD
        SV +L  +++ +++LP  LPPLPPPP  LL  P+ +M  L+ LAFSPS+
Subjt:  SVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSD

AT2G44080.1 ARGOS-like1.1e-0850Show/hide
Query:  RKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPS
        R++     F+L S++VL  +  S+++LPL+LPPLPPPP +LL  P+GIM  L++LAF PS
Subjt:  RKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPS

AT3G59900.1 auxin-regulated gene involved in organ size9.4e-0850.82Show/hide
Query:  FNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV
        F+L S+ +L  +  S+++LPLVLPPLPPPP +LL  P+GIM  L++LAF PS     N  V
Subjt:  FNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCATTGCCGCCGCTCAAGGATATGATCCAATCTCCCGCTGCCGGAAAATTGCTATGGTACGTTGCTTCAACTTAGTGTCCGTTCTCGTCCTCGCCGCCGTTGCGGT
TTCCATGGTCGTTCTGCCGTTGGTTCTTCCGCCGCTGCCTCCGCCACCGCTTGTGCTTCTCTTCTTTCCAGTTGGAATCATGGCGGCGCTTCTCCTCCTCGCTTTTTCCC
CTTCCGATGTCGGCGTCGGGAACGTCGTTGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCATTGCCGCCGCTCAAGGATATGATCCAATCTCCCGCTGCCGGAAAATTGCTATGGTACGTTGCTTCAACTTAGTGTCCGTTCTCGTCCTCGCCGCCGTTGCGGT
TTCCATGGTCGTTCTGCCGTTGGTTCTTCCGCCGCTGCCTCCGCCACCGCTTGTGCTTCTCTTCTTTCCAGTTGGAATCATGGCGGCGCTTCTCCTCCTCGCTTTTTCCC
CTTCCGATGTCGGCGTCGGGAACGTCGTTGTATGA
Protein sequenceShow/hide protein sequence
MRIAAAQGYDPISRCRKIAMVRCFNLVSVLVLAAVAVSMVVLPLVLPPLPPPPLVLLFFPVGIMAALLLLAFSPSDVGVGNVVV