CuGenDBv2

Gene ID	Lsi04G000310
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	cytochrome c oxidase assembly factor 5
Genome location	chr04:463388..465670
RNA-Seq Expression	Lsi04G000310
Synteny	Lsi04G000310
Gene Ontology terms	GO:0033617 - mitochondrial respiratory chain complex IV assembly (biological process) GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR018793 - Cytochrome c oxidase assembly protein PET191

Homology

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GenBank top hits

e value

%identity

Alignment

ADN34196.1 hypothetical protein [Cucumis melo subsp. melo]

1.5e-12

100

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

KAG7031931.1 hypothetical protein SDJN02_05973 [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-12

94.59

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQA+
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

XP_008446948.1 PREDICTED: cytochrome c oxidase assembly factor 5 [Cucumis melo]

1.5e-12

94.59

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ +
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

XP_022956695.1 cytochrome c oxidase assembly factor 5 [Cucurbita moschata]

3.3e-12

91.89

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ +
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

XP_031405462.1 mitochondrial protein pet191 homolog [Punica granatum]

2.2e-11

89.19

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        VQ R+YRECAGEKSPCIPSECVGLRETYFNCKRGQ +
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRS4 Uncharacterized protein

7.2e-13

94.59

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ +
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

A0A1S3BGA9 cytochrome c oxidase assembly factor 5

7.2e-13

94.59

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ +
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

A0A6J1CDL1 cytochrome c oxidase assembly factor 5

7.2e-13

94.59

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ +
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

A0A6J1IEJ6 cytochrome c oxidase assembly factor 5

1.6e-12

91.89

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        VQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ +
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

E5GCJ7 Uncharacterized protein

7.2e-13

100

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Query:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  VQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G10865.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

7.1e-13

77.78

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Query:  QNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN
        + R+ R+C GEKSPCIPSECVGLRETYFNCKRGQ +
Subjt:  QNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQAN

AT1G10865.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

9.3e-13

82.35

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Query:  QNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ
        + R+ R+C GEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  QNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQ

Sequences

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CDS sequence

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ATGGAACTGGTTCAGAACAGAACTTACAGGGAATGTGCTGGAGAGAAGAGTCCTTGTATACCTAGCGAATGTGTGGGATTAAGGGAAACATATTTCAATTGTAAAAGAGG
CCAGGCAAATAATGCTCCCAATACCTGCAATTTGAGTCTAATTCATACTTCTAGAAGCGGTGCTTTTGAAATTCCATTAGGGACTGAGACTAACTGGCTGGCTTTATTTG
GATATGCTCCATACACTGCAGAATGA

mRNA sequence

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Protein sequence

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MELVQNRTYRECAGEKSPCIPSECVGLRETYFNCKRGQANNAPNTCNLSLIHTSRSGAFEIPLGTETNWLALFGYAPYTAE

Lsi04G000310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome