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Lsi04G000460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G000460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCYSTM domain-containing protein
Genome locationchr04:609803..613611
RNA-Seq ExpressionLsi04G000460
SyntenyLsi04G000460
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0005544 - calcium-dependent phospholipid binding (molecular function)
InterPro domainsIPR018502 - Annexin repeat
IPR037104 - Annexin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034744.1 cysteine-rich and transmembrane domain-containing protein A [Cucumis melo var. makuwa]5.0e-2275.71Show/hide
Query:  MAHEDARNNECFHVADGPNKPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVT
        MAHEDAR N+C HV D P++PQPLPSG KSFRC  TQKKGN++ LEG    IFALCCCWICDACFDVSVT
Subjt:  MAHEDARNNECFHVADGPNKPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVT
KAF4347676.1 hypothetical protein G4B88_011093 [Cannabis sativa]9.4e-0551.92Show/hide
Query:  KPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVTA
        K  P     K+  C+ T+KKG+R  +EG    +FALCCCW+CDACFDV+V A
Subjt:  KPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVTA
KAG6601144.1 hypothetical protein SDJN03_06377, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1977.46Show/hide
Query:  MAHEDARNNECFHV-ADGPNKPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVT
        MA EDA+N EC HV AD PN+PQ  PS KKSFRC HTQKKGNRN LEG    IFALCCCWICDACFDVSVT
Subjt:  MAHEDARNNECFHV-ADGPNKPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVT
XP_011656268.1 annexin D4 [Cucumis sativus]6.1e-0460.42Show/hide
Query:  EVGFHRIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLL
        E    RIIIT   +DLDKIK KFK+ + I+L E+I+L CKG YKDLLL
Subjt:  EVGFHRIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLL
TrEMBL top hitse value%identityAlignment
A0A1S4DW61 uncharacterized protein LOC1079903105.1e-0454.55Show/hide
Query:  RIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLLKQEVVSNCSQSE
        RIIITRRG+DLD+I  KF     +SL E+I+L CKG Y+ LLLK  +  N   SE
Subjt:  RIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLLKQEVVSNCSQSE
A0A5A7SY08 Annexin D4-like isoform X25.1e-0454.55Show/hide
Query:  RIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLLKQEVVSNCSQSE
        RIIITRRG+DLD+I  KF     +SL E+I+L CKG Y+ LLLK  +  N   SE
Subjt:  RIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLLKQEVVSNCSQSE
A0A5D3CBC6 Cysteine-rich and transmembrane domain-containing protein A2.4e-2275.71Show/hide
Query:  MAHEDARNNECFHVADGPNKPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVT
        MAHEDAR N+C HV D P++PQPLPSG KSFRC  TQKKGN++ LEG    IFALCCCWICDACFDVSVT
Subjt:  MAHEDARNNECFHVADGPNKPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVT
A0A5D3CDB5 Annexin D4-like isoform X25.1e-0454.55Show/hide
Query:  RIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLLKQEVVSNCSQSE
        RIIITRRG+DLD+I  KF     +SL E+I+L CKG Y+ LLLK  +  N   SE
Subjt:  RIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLLKQEVVSNCSQSE
A0A7J6DNZ5 CYSTM domain-containing protein4.6e-0551.92Show/hide
Query:  KPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVTA
        K  P     K+  C+ T+KKG+R  +EG    +FALCCCW+CDACFDV+V A
Subjt:  KPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVTA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G04080.1 unknown protein1.0e-0452.63Show/hide
Query:  KKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACF
        KK  R   T++KG+R  +EG    +FALCCCWIC+ CF
Subjt:  KKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACATGAAGACGCAAGAAACAACGAGTGCTTCCATGTAGCTGATGGTCCAAACAAACCTCAGCCTCTGCCATCAGGTAAAAAGAGTTTTCGGTGCTCACATACACA
AAAGAAAGGGAACAGAAACTCCCTTGAAGGATGGTCAGTATACATCTTTGCTTTGTGCTGTTGTTGGATTTGTGATGCTTGCTTTGATGTTAGTGTAACTGCTTCAGGCA
GCTGTACACATTTTATAATGCCATGGAATAAGAACACATGTAGTAAAACCTTAAGCTTTAGCATAGTTTCATTTCAGAACCGATCCGAATCCGACGAATGCAATGAAACT
CGCAATTGGATTAGTATCGACCCAGACATCTTGTTGATATACTGGTATCCTCTTGGTCTCCGGCTTAATCCCAAGCCTGCTGACCAATGTCTCTTTCTTTCTGATGTTAA
GTGTGTGCCAATCAATCCGGAAGTTGGATTCCACAGAATCATCATAACCAGACGTGGCCTTGATCTTGATAAGATCAAGGACAAGTTTAAGGATATCGCTGGAATTTCAC
TCCATGAACAAATTCAACTTTCTTGCAAAGGAATGTATAAGGATTTGTTGCTCAAACAAGAAGTTGTTTCAAACTGCTCACAAAGTGAAAACCCAGCTCTTCCTTTATTG
CCCAACATACTTTTGAGAAGGAATGTGGTTTCCTTAAACAATGGTTTCAAGACAGTCTCAAGAATTCTTCCAGGTGTTGTTCTTATGTTGCTCTTCTATGATTAG
mRNA sequenceShow/hide mRNA sequence
GAGAGAACTAACCATTCCTTTGCAACAGGATACAAAGTAGTGAACCTCGGGACGACTGATCTGTCGTTGTTCCGATGGCACATGAAGACGCAAGAAACAACGAGTGCTTC
CATGTAGCTGATGGTCCAAACAAACCTCAGCCTCTGCCATCAGGTAAAAAGAGTTTTCGGTGCTCACATACACAAAAGAAAGGGAACAGAAACTCCCTTGAAGGATGGTC
AGTATACATCTTTGCTTTGTGCTGTTGTTGGATTTGTGATGCTTGCTTTGATGTTAGTGTAACTGCTTCAGGCAGCTGTACACATTTTATAATGCCATGGAATAAGAACA
CATGTAGTAAAACCTTAAGCTTTAGCATAGTTTCATTTCAGAACCGATCCGAATCCGACGAATGCAATGAAACTCGCAATTGGATTAGTATCGACCCAGACATCTTGTTG
ATATACTGGTATCCTCTTGGTCTCCGGCTTAATCCCAAGCCTGCTGACCAATGTCTCTTTCTTTCTGATGTTAAGTGTGTGCCAATCAATCCGGAAGTTGGATTCCACAG
AATCATCATAACCAGACGTGGCCTTGATCTTGATAAGATCAAGGACAAGTTTAAGGATATCGCTGGAATTTCACTCCATGAACAAATTCAACTTTCTTGCAAAGGAATGT
ATAAGGATTTGTTGCTCAAACAAGAAGTTGTTTCAAACTGCTCACAAAGTGAAAACCCAGCTCTTCCTTTATTGCCCAACATACTTTTGAGAAGGAATGTGGTTTCCTTA
AACAATGGTTTCAAGACAGTCTCAAGAATTCTTCCAGGTGTTGTTCTTATGTTGCTCTTCTATGATTAG
Protein sequenceShow/hide protein sequence
MAHEDARNNECFHVADGPNKPQPLPSGKKSFRCSHTQKKGNRNSLEGWSVYIFALCCCWICDACFDVSVTASGSCTHFIMPWNKNTCSKTLSFSIVSFQNRSESDECNET
RNWISIDPDILLIYWYPLGLRLNPKPADQCLFLSDVKCVPINPEVGFHRIIITRRGLDLDKIKDKFKDIAGISLHEQIQLSCKGMYKDLLLKQEVVSNCSQSENPALPLL
PNILLRRNVVSLNNGFKTVSRILPGVVLMLLFYD