; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G000650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G000650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationchr04:829122..829715
RNA-Seq ExpressionLsi04G000650
SyntenyLsi04G000650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601160.1 hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia]9.5e-2964.85Show/hide
Query:  IPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGG
        +PAFCPPLSPFES PPFSFNAL V GAGGGDE TSG GAGGE++V               GG GGLSVV +   GGGGG  VVLDGGGGGG  V LDG G
Subjt:  IPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGG

Query:  GGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGG
        GGG  V L G GGGG  V L G GGGG  V LDG GGGGL V L DGGG G  SV  +GGGGGGG
Subjt:  GGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGG

XP_016900208.1 PREDICTED: loricrin-like [Cucumis melo]1.8e-2769.93Show/hide
Query:  GGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDG
        GGGGGDELVVLDGG  GG+SVVL+GGGGG     VV DGGGGGG SV  DGGGGGG SV   GGGGGG SV   GGGGGG  V LDGGGGGG+SV  D G
Subjt:  GGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDG

Query:  ---------GGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGGDAS
                 GG GG+SV LD GGGGGG+SV LDG GGGG+SV LDGGGGGDAS
Subjt:  ---------GGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGGDAS

XP_022957272.1 loricrin-like [Cucurbita moschata]3.6e-2868.97Show/hide
Query:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSV
        +ITPNA+PAFCPPLSPFES PPFSFNAL V GAGGGDE TSG GAGGE++V   GGGG   VV DGGG GGL VVL+  GGGGGG  VVLDG GGGG  V
Subjt:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSV

Query:  ALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGG
         LDG GGGG  V L GGG         GGGGG PSV  +GGGGGG
Subjt:  ALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGG

XP_023549817.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]8.9e-2765.07Show/hide
Query:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSV
        MITPNA+PAFCPPLSPFES PPFSFNAL V GAG GDE TSG GAGGE++V               GG GGLSVV +   GGGGGP VV +GGGGGG  V
Subjt:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSV

Query:  ALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG
         LD  GGGG  V L G GGGG  V L GGGGGG PSV  +GGGGGG
Subjt:  ALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG

XP_031741791.1 glycine-rich protein 23-like [Cucumis sativus]2.2e-5475.12Show/hide
Query:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGG----------GEGGLSVVLEGG----------G
        MITPNAIPAFCPPL+PFE PPPFSFNA L  G GGGDEP  GGGAGG++ V LGGGGG ELVVLDGG          G GG SVVL GG          G
Subjt:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGG----------GEGGLSVVLEGG----------G

Query:  GGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGGLSVALDGDG
        GGGGG  V LDGGGGGG SVALDGGGGGG SVAL GGGGGG SVAL GGGGGG SVALDGGGGGG SVAL DGGG GG SVALDGGGGGG  SVALDG G
Subjt:  GGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGGLSVALDGDG

Query:  GGGLSVALDGGGGGDAS
        GGG SVALDGGGGG AS
Subjt:  GGGLSVALDGGGGGDAS

TrEMBL top hitse value%identityAlignment
A0A1S4DW63 loricrin-like8.7e-2869.93Show/hide
Query:  GGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDG
        GGGGGDELVVLDGG  GG+SVVL+GGGGG     VV DGGGGGG SV  DGGGGGG SV   GGGGGG SV   GGGGGG  V LDGGGGGG+SV  D G
Subjt:  GGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDG

Query:  ---------GGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGGDAS
                 GG GG+SV LD GGGGGG+SV LDG GGGG+SV LDGGGGGDAS
Subjt:  ---------GGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGGDAS

A0A2B7ZNF9 Uncharacterized protein (Fragment)7.4e-1152.91Show/hide
Query:  LVGGAGGGDEPTSG--GGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVAL
        +V GAGGG     G  GG GG +++  GGGGG   VVL  GG GG      GGGGGGGG  V+  GGGGGG    + G GGGG  V   GGGGGG SV L
Subjt:  LVGGAGGGDEPTSG--GGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVAL

Query:  VGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALD----GGGGGGGLSVALDGDGGGGLSVALDGGGGG
          GGGG   +   GGGGGG +  L  GGG GG+SV L     GGGGGGG  V   G GGGG  V   GGGGG
Subjt:  VGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALD----GGGGGGGLSVALDGDGGGGLSVALDGGGGG

A0A6I8T397 Cysteine-rich venom protein, putative2.3e-1252.73Show/hide
Query:  GGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVV-LDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGG
        GG GG    + GGG GG +    GGGGG  +V   GGG GG+ V  +GGGGGGGG +VV   GGGGGG  V   GGGGGG  V   GGGG G  +   GG
Subjt:  GGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVV-LDGGGGGGPSVALDGGGGGGPSVALVGGGGGGPSVALVGG

Query:  GGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGG
        GGGG  V   GGGGGG  V +   GG GG  V+   GGGGGG+ V   G GGGG+ V   GGGGG
Subjt:  GGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGG

A0A6J1GYP3 loricrin-like1.7e-2868.97Show/hide
Query:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSV
        +ITPNA+PAFCPPLSPFES PPFSFNAL V GAGGGDE TSG GAGGE++V   GGGG   VV DGGG GGL VVL+  GGGGGG  VVLDG GGGG  V
Subjt:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSV

Query:  ALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGG
         LDG GGGG  V L GGG         GGGGG PSV  +GGGGGG
Subjt:  ALDGGGGGGPSVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGG

A0A6J1JS83 glycine-rich cell wall structural protein 1.0-like1.3e-2363.01Show/hide
Query:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSV
        +ITP  +PAFCPPLSPFES PPFSFNA  V GAGGGDE TSG GA                     GG GG+SVV +GGGGGGG P  VLDGGGGGG  V
Subjt:  MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSV

Query:  ALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG
         LDGGGGGG  V L G GGGG  V L GGGGGG PSV  +GGGGGG
Subjt:  ALDGGGGGGPSVALVGGGGGGPSVALVGGGGGG-PSVALDGGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACTCCAAACGCAATCCCTGCCTTTTGTCCACCGCTCAGTCCTTTTGAATCTCCACCACCCTTTTCATTCAATGCTTTATTAGTTGGCGGTGCCGGTGGCGGAGA
TGAACCCACATCAGGCGGTGGCGCCGGTGGTGAGATAATGGTGCCACTGGGTGGCGGTGGTGGAGATGAGTTGGTTGTATTGGATGGTGGTGGTGAAGGTGGACTGTCAG
TTGTGTTGGAGGGCGGCGGTGGTGGCGGCGGCGGACCATTAGTTGTGTTGGATGGCGGTGGAGGTGGCGGACCGTCAGTTGCGTTGGATGGCGGCGGAGGTGGTGGACCG
TCAGTTGCGTTGGTTGGCGGCGGAGGTGGTGGACCGTCAGTTGCGTTGGTTGGCGGCGGCGGGGGTGGACCGTCAGTTGCGTTGGATGGTGGCGGCGGTGGTGGACTGTC
AGTTGCGTTGGATGATGGCGGCGGCAGTGGTGGACTGTCAGTTGCGTTGGATGGTGGCGGCGGCGGTGGTGGACTGTCAGTTGCGTTGGATGGCGATGGAGGTGGTGGAC
TGTCAGTTGCGTTGGATGGCGGTGGAGGAGGAGATGCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCACTCCAAACGCAATCCCTGCCTTTTGTCCACCGCTCAGTCCTTTTGAATCTCCACCACCCTTTTCATTCAATGCTTTATTAGTTGGCGGTGCCGGTGGCGGAGA
TGAACCCACATCAGGCGGTGGCGCCGGTGGTGAGATAATGGTGCCACTGGGTGGCGGTGGTGGAGATGAGTTGGTTGTATTGGATGGTGGTGGTGAAGGTGGACTGTCAG
TTGTGTTGGAGGGCGGCGGTGGTGGCGGCGGCGGACCATTAGTTGTGTTGGATGGCGGTGGAGGTGGCGGACCGTCAGTTGCGTTGGATGGCGGCGGAGGTGGTGGACCG
TCAGTTGCGTTGGTTGGCGGCGGAGGTGGTGGACCGTCAGTTGCGTTGGTTGGCGGCGGCGGGGGTGGACCGTCAGTTGCGTTGGATGGTGGCGGCGGTGGTGGACTGTC
AGTTGCGTTGGATGATGGCGGCGGCAGTGGTGGACTGTCAGTTGCGTTGGATGGTGGCGGCGGCGGTGGTGGACTGTCAGTTGCGTTGGATGGCGATGGAGGTGGTGGAC
TGTCAGTTGCGTTGGATGGCGGTGGAGGAGGAGATGCATCTTGA
Protein sequenceShow/hide protein sequence
MITPNAIPAFCPPLSPFESPPPFSFNALLVGGAGGGDEPTSGGGAGGEIMVPLGGGGGDELVVLDGGGEGGLSVVLEGGGGGGGGPLVVLDGGGGGGPSVALDGGGGGGP
SVALVGGGGGGPSVALVGGGGGGPSVALDGGGGGGLSVALDDGGGSGGLSVALDGGGGGGGLSVALDGDGGGGLSVALDGGGGGDAS