CuGenDBv2

Gene ID	Lsi04G000900
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Vacuolar acid trehalase
Genome location	chr04:1055313..1059297
RNA-Seq Expression	Lsi04G000900
Synteny	Lsi04G000900
Gene Ontology terms	NA
InterPro domains	IPR016621 - Uncharacterised conserved protein UCP014543

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601181.1 hypothetical protein SDJN03_06414, partial [Cucurbita argyrosperma subsp. sororia]

7.8e-56

61.86

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        MA SLTFSP PFLNSRALP TFFHFI G PS+IP LSVS  SNPLKLKL R  RASSE      GAPN+LIEDSKFVPLNA+DP YGPP LLLLGFELE+
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
        AVKIQELLK LDGEFMQV+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASERP
        MGDHEA+TGA SERP
Subjt:  MGDHEAMTGAASERP

XP_022956817.1 uncharacterized protein LOC111458403 [Cucurbita moschata]

3.5e-56

61.86

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        MA SLTFSP PFLNSRALP+TFFHFI G PS+IP LSVS  SNPLKLKL R  RASSE      GAPN+LIEDSKFVPLNA+DP YGPP LLLLGFELE+
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
        AVKIQELLK LDGEFMQV+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASERP
        MGDHEA+TGA SERP
Subjt:  MGDHEAMTGAASERP

XP_023535741.1 uncharacterized protein LOC111797077 [Cucurbita pepo subsp. pepo]

8.4e-58

62.79

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        MA SLTFSP PFLNSRALP+TFFHFI G PS+IPPLSVS TSNPLKLKL R  RASSE      GAPN+LIEDSKFVPLNA+DP YGPP LLLLGFELE+
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
        AVKIQELLK LDGEFMQV+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASERP
        MGDHEA+TGA SERP
Subjt:  MGDHEAMTGAASERP

XP_038891526.1 uncharacterized protein LOC120080918 isoform X1 [Benincasa hispida]

3.5e-64

66.05

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        +A SLTFSP P LNSRALP TFFHFING PSKI PLSVS TSNPLKLKL R  R SSEVNFTSTGAPN+L+EDSKFVPLNA+DPRYGPP LLLLGFELEE
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
        AVKIQELLKDLDGEFMQV+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASERP
        MGDHEA+TGAASERP
Subjt:  MGDHEAMTGAASERP

XP_038891527.1 uncharacterized protein LOC120080918 isoform X2 [Benincasa hispida]

9.9e-59

63.26

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        +A SLTFSP P LNSRALP TFFHFING PSKI PLSVS TSNPLKLKL R  R SSE      GAPN+L+EDSKFVPLNA+DPRYGPP LLLLGFELEE
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
        AVKIQELLKDLDGEFMQV+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASERP
        MGDHEA+TGAASERP
Subjt:  MGDHEAMTGAASERP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRH8 Uncharacterized protein

1.5e-52

58.6

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        MA SLTFSP PFLNSR L  + FHFING  SKI PLS S T NPLKLK+ R  +ASSE      GA N+L+ED+KFVPLNA+DPRYGPP LLLLGFEL+E
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
        AVKIQELLKDLDGEFMQV+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASERP
        MGDHEAMTGA SE P
Subjt:  MGDHEAMTGAASERP

A0A1S3BGP1 uncharacterized protein LOC103489442

8.7e-53

59.62

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        MA SLTFSP PFLNSR L  T FHFING  SKIPPLS S T NP KLKL R S+ASSE      GA N+LIED+KFV LNA+DPRYGPP LLLLGFEL+E
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
         VKIQELLKDLDGEFM+V+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASE
        MGDHEAMTGAASE
Subjt:  MGDHEAMTGAASE

A0A5A7SZ69 Uncharacterized protein

8.7e-53

59.62

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        MA SLTFSP PFLNSR L  T FHFING  SKIPPLS S T NP KLKL R S+ASSE      GA N+LIED+KFV LNA+DPRYGPP LLLLGFEL+E
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
         VKIQELLKDLDGEFM+V+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASE
        MGDHEAMTGAASE
Subjt:  MGDHEAMTGAASE

A0A6J1GXF1 uncharacterized protein LOC111458403

1.7e-56

61.86

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        MA SLTFSP PFLNSRALP+TFFHFI G PS+IP LSVS  SNPLKLKL R  RASSE      GAPN+LIEDSKFVPLNA+DP YGPP LLLLGFELE+
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI
        AVKIQELLK LDGEFMQV+                                               F       GLEP+VFAALVPNAANKPVEELIEEI
Subjt:  AVKIQELLKDLDGEFMQVV----------------------------------------------HFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASERP
        MGDHEA+TGA SERP
Subjt:  MGDHEAMTGAASERP

A0A6J1JNY6 uncharacterized protein LOC111487032

1.9e-55

60.47

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Query:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE
        MA SLTFSP  FLNSRALP+TFFHFI G PS+I PLSVS  SNPLKLKL R  RASSE      GAPN+LIEDSKFVPLNA+DP YGPP LLLLGFELE+
Subjt:  MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEE

Query:  AVKIQELLKDLDGEFMQVVHFPSHSYS----------------------------------------------LGLEPSVFAALVPNAANKPVEELIEEI
        AVKIQELLK LDGEFMQV+      ++                                               GLEP+VFAALVPNAANKPVEEL+EEI
Subjt:  AVKIQELLKDLDGEFMQVVHFPSHSYS----------------------------------------------LGLEPSVFAALVPNAANKPVEELIEEI

Query:  MGDHEAMTGAASERP
        MGDHEA+TGA SERP
Subjt:  MGDHEAMTGAASERP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G10405.1 unknown protein

5.3e-26

45.89

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Query:  PNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEEAVKIQELLKDLDGEFMQVVH----------------------------------------------
        P  L EDSKFVPL+ +DPR+GPPVLLLLG +L EA KIQELLK+LDGEFM++V                                               
Subjt:  PNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEEAVKIQELLKDLDGEFMQVVH----------------------------------------------

Query:  FPSHSYSLGLEPSVFAALVPNAANKPVEELIEEIMGDHEAMTGAAS
        F       GLEP VFAA+VPN+A+KP+ EL EEIMGDHE +TG++S
Subjt:  FPSHSYSLGLEPSVFAALVPNAANKPVEELIEEIMGDHEAMTGAAS

Sequences

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CDS sequence

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ATGGCTCCATCTCTAACCTTCTCTCCGTGTCCATTTTTGAACTCGCGCGCCCTACCAGCCACCTTTTTCCATTTCATCAATGGCGTGCCTTCCAAAATTCCACCACTATC
CGTTTCTCCTACAAGTAATCCCCTCAAGTTGAAGCTCCCACGAATTTCCAGAGCGTCTTCTGAAGTTAATTTCACTTCTACAGGAGCTCCCAATGATTTAATCGAGGACT
CGAAGTTTGTTCCCTTGAATGCTGAAGATCCCAGATATGGTCCACCTGTATTGCTGTTGCTGGGCTTTGAACTGGAGGAGGCAGTGAAGATTCAAGAGCTTTTGAAAGAT
TTGGACGGCGAATTCATGCAGGTAGTTCATTTCCCCTCGCATTCATATTCTTTAGGACTTGAACCATCTGTATTTGCTGCTCTTGTTCCCAACGCTGCTAATAAACCAGT
AGAAGAGTTAATAGAAGAGATCATGGGGGACCATGAAGCGATGACTGGTGCTGCATCAGAAAGGCCATAG

mRNA sequence

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AACGGCGACGAGGTTGGGATAAGACAGAAACCAGAGAGTTCCAATGGCTCCATCTCTAACCTTCTCTCCGTGTCCATTTTTGAACTCGCGCGCCCTACCAGCCACCTTTT
TCCATTTCATCAATGGCGTGCCTTCCAAAATTCCACCACTATCCGTTTCTCCTACAAGTAATCCCCTCAAGTTGAAGCTCCCACGAATTTCCAGAGCGTCTTCTGAAGTT
AATTTCACTTCTACAGGAGCTCCCAATGATTTAATCGAGGACTCGAAGTTTGTTCCCTTGAATGCTGAAGATCCCAGATATGGTCCACCTGTATTGCTGTTGCTGGGCTT
TGAACTGGAGGAGGCAGTGAAGATTCAAGAGCTTTTGAAAGATTTGGACGGCGAATTCATGCAGGTAGTTCATTTCCCCTCGCATTCATATTCTTTAGGACTTGAACCAT
CTGTATTTGCTGCTCTTGTTCCCAACGCTGCTAATAAACCAGTAGAAGAGTTAATAGAAGAGATCATGGGGGACCATGAAGCGATGACTGGTGCTGCATCAGAAAGGCCA
TAGGCAAGCACTCAAACTAGAAAGCTGCAGATTTAGAGAGTTCTGAAACATCTTCCCCCTTTGTTCCTTTCGTTATTTTTTCTTTTGAAAATCATTGTTCTTTTTGTCTT
AAATCCTATCTGGAGCTGTCTTGTATTTTATTCAACTATGTATCATCTTATATCATATATATGATGGTTGATATTATACCAATTAAATCTGAAGTTTTTTTTCCCCTCCA
TTCTCTTAATCCTGTTATGTATTTTAAATGTTTAGATGATGA

Protein sequence

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MAPSLTFSPCPFLNSRALPATFFHFINGVPSKIPPLSVSPTSNPLKLKLPRISRASSEVNFTSTGAPNDLIEDSKFVPLNAEDPRYGPPVLLLLGFELEEAVKIQELLKD
LDGEFMQVVHFPSHSYSLGLEPSVFAALVPNAANKPVEELIEEIMGDHEAMTGAASERP

Lsi04G000900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome