; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G000930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G000930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlycine-rich RNA-binding protein RZ1C-like isoform X1
Genome locationchr04:1081585..1084190
RNA-Seq ExpressionLsi04G000930
SyntenyLsi04G000930
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648851.1 hypothetical protein Csa_008374 [Cucumis sativus]5.7e-13594.88Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        ++  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY GGGGGGDRSARQDECFKCGRLGHW
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG
        ARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD+NRYVDDRY+GGGRFGDRDRFDSS+RDNKYGSRDRYVSDRYPPGGDRFGSSRY N+SDRFPVNG
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG

Query:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Subjt:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

XP_004142412.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus]5.7e-13594.88Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        ++  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY GGGGGGDRSARQDECFKCGRLGHW
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG
        ARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD+NRYVDDRY+GGGRFGDRDRFDSS+RDNKYGSRDRYVSDRYPPGGDRFGSSRY N+SDRFPVNG
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG

Query:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Subjt:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

XP_038892830.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]8.0e-13795.28Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        ++  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG
        ARDCPSVGGGRGRGGDSFL R+RLGDSDRGDRFAGD+NRYVDDRYEGGGRFGDRDRFDSS+RDNKYGSRDRYVS+RYPPGGDRFGSSRYNN+SDRFPVNG
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG

Query:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        YGKDRGYYRDGGPRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

XP_038892831.1 glycine-rich RNA-binding protein RZ1C-like isoform X2 [Benincasa hispida]2.3e-13696.8Show/hide
Query:  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDC
        IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDC
Subjt:  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDC

Query:  PSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKD
        PSVGGGRGRGGDSFL R+RLGDSDRGDRFAGD+NRYVDDRYEGGGRFGDRDRFDSS+RDNKYGSRDRYVS+RYPPGGDRFGSSRYNN+SDRFPVNGYGKD
Subjt:  PSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKD

Query:  RGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        RGYYRDGGPRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  RGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

XP_038892832.1 glycine-rich RNA-binding protein RZ1C-like isoform X3 [Benincasa hispida]6.7e-13696.79Show/hide
Query:  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCP
        MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCP
Subjt:  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCP

Query:  SVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDR
        SVGGGRGRGGDSFL R+RLGDSDRGDRFAGD+NRYVDDRYEGGGRFGDRDRFDSS+RDNKYGSRDRYVS+RYPPGGDRFGSSRYNN+SDRFPVNGYGKDR
Subjt:  SVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDR

Query:  GYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        GYYRDGGPRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  GYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

TrEMBL top hitse value%identityAlignment
A0A0A0KUW9 Uncharacterized protein2.3e-13496.39Show/hide
Query:  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCP
        MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY GGGGGGDRSARQDECFKCGRLGHWARDCP
Subjt:  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCP

Query:  SVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDR
        SVGGGRGRGGDSFL RSRLGDSDRGDRFAGD+NRYVDDRY+GGGRFGDRDRFDSS+RDNKYGSRDRYVSDRYPPGGDRFGSSRY N+SDRFPVNGYGKDR
Subjt:  SVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDR

Query:  GYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        GYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Subjt:  GYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

A0A1S3BFI2 glycine-rich RNA-binding protein RZ1C-like isoform X22.2e-13295.98Show/hide
Query:  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCP
        MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY  GGGGGDRSARQDECFKCGRLGHWARDCP
Subjt:  MLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCP

Query:  SVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDR
        SVGGGRGRGGDSFL RSRLGD DRGDRFAGD+NRYVDDRYEGGGRFGDRDRFDSS+RDNKYGSRDRYVSDRYPPGGDRFGS RYNN+SDRFPVNGYGKDR
Subjt:  SVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDR

Query:  GYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        GYYRD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  GYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

A0A1S3BGN5 glycine-rich RNA-binding protein RZ1C-like isoform X12.6e-13394.49Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        ++  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY  GGGGGDRSARQDECFKCGRLGHW
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG
        ARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD+NRYVDDRYEGGGRFGDRDRFDSS+RDNKYGSRDRYVSDRYPPGGDRFGS RYNN+SDRFPVNG
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG

Query:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        YGKDRGYYRD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

A0A5D3CG30 Glycine-rich RNA-binding protein RZ1C-like isoform X12.6e-13394.49Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        ++  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFG+RIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSY  GGGGGDRSARQDECFKCGRLGHW
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG
        ARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD+NRYVDDRYEGGGRFGDRDRFDSS+RDNKYGSRDRYVSDRYPPGGDRFGS RYNN+SDRFPVNG
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG

Query:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        YGKDRGYYRD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

A0A6J1GY86 glycine-rich RNA-binding protein RZ1C-like isoform X14.6e-12287.4Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        ++  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHG+EFG+RIISVNKAEPKMGED+DHGYR                GGGDRSARQDECFKCGR GHW
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG
        ARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD+NRYVDDRYEGGGRFGDRDRFD+S RD+KYG+RDRYVS+RYPPGGDRFGSSRYNN+SDRFPVNG
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNG

Query:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  YGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B5.5e-5650.93Show/hide
Query:  EENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        E  IM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS+ G+G+             +DECFKC R GHW
Subjt:  EENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAG-----------DSNRYVDDRYE-GGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSS
        ARDCPS G  R R       RSR+GD D   DR+             + +RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S 
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAG-----------DSNRYVDDRYE-GGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSS

Query:  RYNNESDRFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY
        RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Subjt:  RYNNESDRFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY

P49310 Glycine-rich RNA-binding protein GRP1A8.3e-1243.59Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYR--GGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLG
        ++  I+ ++ TGR RGFGF+TF D + M DAI  M+GQ+   R I+VN+A+ + G     G R  GGGY +GG G YGGGGGG     R+   +  G  G
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYR--GGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLG

Query:  HWARDCPSVGGGRGRGG
        + +R     GGG G GG
Subjt:  HWARDCPSVGGGRGRGG

Q03251 Glycine-rich RNA-binding protein 81.3e-1237.66Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPK--MGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLG
        ++  I+ ++ +GR RGFGF+TF D + M DAI EM+G+E   R+I+VN+A+ +   G     G  GGGY +GG G Y GGGGGG         +  G  G
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPK--MGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLG

Query:  HWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFG
         + R     G G G GG  + G  R    + G    GD   Y      GGG  G
Subjt:  HWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C6.5e-6557.04Show/hide
Query:  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGH
        IMLE++TGR RGFGFITF+DRR MD++IREMHG++FGDR+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGGGG R   +DECFKCGR+GH
Subjt:  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGH

Query:  WARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----DSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNN
        WARDCPS GGGRG     F  R S  G SD R DR+A      D  RY+DDRY+G  R+G RDRFDS      Y  RDRY SDRY    DRF G  RY+ 
Subjt:  WARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----DSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNN

Query:  ESDRFPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG------RPSSFDRY
         SDR+P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR G        S+FDRY
Subjt:  ESDRFPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG------RPSSFDRY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A2.3e-2237.26Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCG
        +E  ++L+K +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P  G      D D G R  GY    R    GG GGGD       CFKCG
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCG

Query:  RLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDR-DRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGS--SRYNNE
        + GH+AR+CPS                             +S+R      +GGGRF  + DR+  S++D++YG++D    DRY    DR+G+   RY+++
Subjt:  RLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDR-DRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGS--SRYNNE

Query:  SDRFPVNGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG
         DR+       DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Subjt:  SDRFPVNGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.9e-5750.93Show/hide
Query:  EENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        E  IM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS+ G+G+             +DECFKC R GHW
Subjt:  EENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAG-----------DSNRYVDDRYE-GGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSS
        ARDCPS G  R R       RSR+GD D   DR+             + +RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S 
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAG-----------DSNRYVDDRYE-GGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSS

Query:  RYNNESDRFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY
        RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Subjt:  RYNNESDRFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.9e-5750.93Show/hide
Query:  EENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW
        E  IM+ ++TGRPRGFGFITF+DRRG DDAI+ MHG+E G+++ISVNKAEPK+ GED+D   +GGGYS+ G+G+             +DECFKC R GHW
Subjt:  EENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKM-GEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHW

Query:  ARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAG-----------DSNRYVDDRYE-GGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSS
        ARDCPS G  R R       RSR+GD D   DR+             + +RY+D R +  GGR+  RDRFDS    +KY  RD Y  +RY P GDRF S 
Subjt:  ARDCPSVGGGRGRGGDSFLGRSRLGDSD-RGDRFAG-----------DSNRYVDDRYE-GGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSS

Query:  RYNNESDRFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY
        RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Subjt:  RYNNESDRFPVNGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.7e-2337.26Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCG
        +E  ++L+K +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P  G      D D G R  GY    R    GG GGGD       CFKCG
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMG-----EDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCG

Query:  RLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDR-DRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGS--SRYNNE
        + GH+AR+CPS                             +S+R      +GGGRF  + DR+  S++D++YG++D    DRY    DR+G+   RY+++
Subjt:  RLGHWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDR-DRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGS--SRYNNE

Query:  SDRFPVNGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG
         DR+       DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Subjt:  SDRFPVNGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 19.1e-1437.66Show/hide
Query:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPK--MGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLG
        ++  I+ ++ +GR RGFGF+TF D + M DAI EM+G+E   R+I+VN+A+ +   G     G  GGGY +GG G Y GGGGGG         +  G  G
Subjt:  MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPK--MGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLG

Query:  HWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFG
         + R     G G G GG  + G  R    + G    GD   Y      GGG  G
Subjt:  HWARDCPSVGGGRGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain4.6e-6657.04Show/hide
Query:  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGH
        IMLE++TGR RGFGFITF+DRR MD++IREMHG++FGDR+ISVN+AEPK+G D    HG RGG   GYS  G+GS+GGGGGGG R   +DECFKCGR+GH
Subjt:  IMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGED--MDHGYRGG---GYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGH

Query:  WARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----DSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNN
        WARDCPS GGGRG     F  R S  G SD R DR+A      D  RY+DDRY+G  R+G RDRFDS      Y  RDRY SDRY    DRF G  RY+ 
Subjt:  WARDCPSVGGGRGRGGDSFLGR-SRLGDSD-RGDRFAG-----DSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRF-GSSRYNN

Query:  ESDRFPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG------RPSSFDRY
         SDR+P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR G        S+FDRY
Subjt:  ESDRFPVNGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG------RPSSFDRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAACATCATGCTGGAAAAGAATACGGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCTGATCGCCGGGGAATGGATGATGCTATCAGAGAGATGCATGG
ACAAGAATTCGGAGATCGGATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACTGGTGGCAGGGGTA
GCTATGGGGGTGGGGGAGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGC
CGAGGAAGGGGAGGAGACTCATTTCTTGGACGTTCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGACAGTAATCGTTATGTGGATGATCGTTATGAAGG
TGGTGGGCGCTTTGGAGATAGAGATCGTTTTGATAGCAGCACTAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTACCCTCCTGGTGGTGATCGCT
TTGGAAGCAGTAGGTATAATAACGAATCTGATCGTTTCCCCGTAAATGGCTATGGAAAAGATAGGGGATATTATAGAGATGGTGGACCTCGTGGGGTTGATAAGTATGGA
AGCGGCGGTCCAGCACGCGACGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAACATCATGCTGGAAAAGAATACGGGCCGCCCACGTGGCTTTGGTTTTATTACATTTTCTGATCGCCGGGGAATGGATGATGCTATCAGAGAGATGCATGG
ACAAGAATTCGGAGATCGGATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATGGACCATGGTTACAGGGGGGGAGGATACTCAACTGGTGGCAGGGGTA
GCTATGGGGGTGGGGGAGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCTTGGACACTGGGCTAGAGATTGTCCTTCAGTTGGTGGTGGC
CGAGGAAGGGGAGGAGACTCATTTCTTGGACGTTCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGACAGTAATCGTTATGTGGATGATCGTTATGAAGG
TGGTGGGCGCTTTGGAGATAGAGATCGTTTTGATAGCAGCACTAGGGACAACAAATATGGAAGTCGTGATCGCTATGTTAGTGACAGGTACCCTCCTGGTGGTGATCGCT
TTGGAAGCAGTAGGTATAATAACGAATCTGATCGTTTCCCCGTAAATGGCTATGGAAAAGATAGGGGATATTATAGAGATGGTGGACCTCGTGGGGTTGATAAGTATGGA
AGCGGCGGTCCAGCACGCGACGAGGGAAGAAGCTATAGAAACAGACCAGCTCCTTATGATCGCCCTAGCCGTGGTGGGCGGCCATCATCATTTGATCGTTATTGAATGTT
TGTATTGTTAGCACATTATCAGGTTTATCGAAAGTACTACATGCTCGGTGTTGTGCCGTTAGTTATCTAGGATCTAGTTGGAGTACCATGGCCTGACTGACAGACAGATT
GTTGCAGTTTCGTGTAGCTTTCATGTATCTGAGTTTTTGTTCAGAGACAGATAAATGCTCAAAAGAATGAGAACAGATTTAAGTTGACCACTTTGTGATTCCTAAAGTGT
TGAGATGAATATCGTGGGGAGCGGCATAAGGTTGAGTCGGGGACTCTTAAGGCTCGTTTGATTCATAATCCATAAACAAATTAATAAACACAACTCTAGAAGCCAGTGGG
AACATATTTGTGTATTTGGCCGCACTTTTTTCTGTGCAGAAAAGAGGTATGATGATAGAGGAAGTAAAAATGAGAAGCTGGAAAATTGGCCTCCCAATGAGCACGAAGAA
CAAACTCTGCTGTCAGTTAGAGTTTAAAATGAGAGGCTTTAATGGAAGAAATTTGGTTTGGTTTGGCCTTCAATTGGAATTTCTGACTTGCTTTTCTCCCATTTTCTCAA
TATCACTGTTTTCTATATTTCTTCCACTCTCTTGTTCCTGATTTTCTCTTTAACTTTAGGGAAAATGAGAAAAAAATGTGTGCATATTTTGAGTGTTTGACTCTATTTCT
AATTTCTCCTATTAATTTCTTGAAAATTGTGAAGAAAAAAGTGTAGATATTTTGCGTAGTTGACTCTATTA
Protein sequenceShow/hide protein sequence
MEENIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGQEFGDRIISVNKAEPKMGEDMDHGYRGGGYSTGGRGSYGGGGGGGDRSARQDECFKCGRLGHWARDCPSVGGG
RGRGGDSFLGRSRLGDSDRGDRFAGDSNRYVDDRYEGGGRFGDRDRFDSSTRDNKYGSRDRYVSDRYPPGGDRFGSSRYNNESDRFPVNGYGKDRGYYRDGGPRGVDKYG
SGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY