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Lsi04G000980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G000980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMajor facilitator superfamily protein
Genome locationchr04:1118750..1119270
RNA-Seq ExpressionLsi04G000980
SyntenyLsi04G000980
Gene Ontology termsGO:0002239 - response to oomycetes (biological process)
GO:0006817 - phosphate ion transport (biological process)
GO:0099587 - inorganic ion import across plasma membrane (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsIPR010658 - Nodulin-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573851.1 Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia]1.9e-5085Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++FSLYS+DIKSVLGY+QTTLNLLSFFKDLG N+GILSGLINEVT PWVVLSIGA LNFFGYFMIWLAVT+RI TPKVWQMCLYIC+GANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF ++ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

XP_004142499.3 protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus]1.9e-5085.83Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++F LYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA LNFFGYFMIWLAVTRRI  PKVWQMCLYICIGANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

XP_008446819.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis melo]4.9e-5186.67Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++F LYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA LNFFGYFMIWLAVTRRI TPKVWQMCLYICIGANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

XP_022956604.1 protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita moschata]2.4e-5085Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++FSLYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA +NFFGYFMIWLAVTR+I  PKVWQMCLYICIGANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

XP_023541417.1 protein NUCLEAR FUSION DEFECTIVE 4-like [Cucurbita pepo subsp. pepo]8.3e-5185.83Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++FSLYS+DIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA LNFFGYFMIWLAVT+RI TPKVWQMCLYICIGANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

TrEMBL top hitse value%identityAlignment
A0A1S3BG09 protein NUCLEAR FUSION DEFECTIVE 4-like2.4e-5186.67Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++F LYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA LNFFGYFMIWLAVTRRI TPKVWQMCLYICIGANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

A0A5D3CFW3 Protein NUCLEAR FUSION DEFECTIVE 4-like2.4e-5186.67Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++F LYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA LNFFGYFMIWLAVTRRI TPKVWQMCLYICIGANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

A0A6J1FZF2 protein NUCLEAR FUSION DEFECTIVE 41.5e-5084.17Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++FSLYS+DIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA LNFFGYFMIWLAVT+RI TPKVWQMCLYIC+GANSQSF N
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

A0A6J1GZI8 protein NUCLEAR FUSION DEFECTIVE 4-like1.2e-5085Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++FSLYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA +NFFGYFMIWLAVTR+I  PKVWQMCLYICIGANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

A0A6J1K186 protein NUCLEAR FUSION DEFECTIVE 4-like7.6e-5084.17Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++FSLYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA +NFFGYFMIWLAVT +I  PKVWQMCLYICIGANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

SwissProt top hitse value%identityAlignment
F4I9E1 Protein NUCLEAR FUSION DEFECTIVE 44.5e-0735.09Show/hide
Query:  FSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGAN-SQSFANTGSMV
        FS YSS +KSVLG +Q  LN L+   DLG   G  SG+        VVL   A + F GY + WL +T  I  P  + +    C+ A  S  + NT   +
Subjt:  FSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGAN-SQSFANTGSMV

Query:  TFVKNFLENCGVVL
          +++F  N  + L
Subjt:  TFVKNFLENCGVVL

Arabidopsis top hitse value%identityAlignment
AT1G18940.1 Nodulin-like / Major Facilitator Superfamily protein1.1e-2441.79Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTL--------------PWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMC
        AG ++ F +YS+ +KS   Y+Q+TL+ +S FKD+GGN+G+LSGL+                   PWVV+ IGA LNF GYF++W +VT  I  P V  MC
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTL--------------PWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMC

Query:  LYICIGANSQSFANTGSMVTFVKNFLENCGVVLG
        L++ I A S +F NT ++V+ ++NF +  G  +G
Subjt:  LYICIGANSQSFANTGSMVTFVKNFLENCGVVLG

AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein1.7e-2239.71Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTL----------------PWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQ
        +GA++ F +YS+ +KS   Y+Q+TL+ +S FKD+G N G+ SGL+                     PWVVL++GA   F GYF+IW +VT  I  P V  
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTL----------------PWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQ

Query:  MCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG
        MCL++ + A SQ+F NT ++V+ V+NF +  G  +G
Subjt:  MCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG

AT2G28120.1 Major facilitator superfamily protein2.5e-4568.8Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++F  YS DIKS LGY+QTTLNLL FFKDLG N+G+LSGLI EVT  W VL+IG+ +NF GYFMIWL VT ++  PKVWQMCLYICIGANSQ+FAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLGKYFNY
        TG++VT VKNF E+ GV+LG    Y
Subjt:  TGSMVTFVKNFLENCGVVLGKYFNY

AT2G39210.1 Major facilitator superfamily protein3.7e-4975Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AGA ++F +YS DIK  LGY+QTTLNLLSFFKDLG N+G+L+GL+NEVT PW +L IGA LNFFGYFMIWLAVT RI  P+VW MCLYIC+GANSQSFAN
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TGS+VT VKNF E+ GVVLG
Subjt:  TGSMVTFVKNFLENCGVVLG

AT5G14120.1 Major facilitator superfamily protein6.6e-2240.83Show/hide
Query:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN
        AG  ++F   S  IKS L YNQ  L+ L   KDLG ++G ++G ++E+   W  L +GA  N  GY  +WL VT R P   +W MC+ I +G N +++ N
Subjt:  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFAN

Query:  TGSMVTFVKNFLENCGVVLG
        TG++V+ V+NF ++ G V+G
Subjt:  TGSMVTFVKNFLENCGVVLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGTTTGTGATGTTCACTTCACTCTTGATCATGGCGCCGGAGCGGCGCACATATTCAGCCTATATTCGAGTGACATAAAATCTGTTTTGGGTTACAACCAA
ACGACTTTGAATTTGCTAAGCTTTTTCAAAGATTTGGGTGGAAATATCGGCATTTTGTCCGGGCTTATTAACGAGGTTACACTGCCATGGGTGGTTCTGTCCATC
GGCGCCTTTCTAAATTTCTTTGGTTACTTTATGATTTGGCTCGCCGTTACTCGACGGATCCCCACCCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGA
GCCAATTCTCAGTCTTTTGCTAATACGGGTTCTATGGTAACATTTGTCAAGAACTTTCTCGAAAATTGCGGTGTCGTTCTTGGTAAGTATTTTAATTATAAGTTT
AGTTCC
mRNA sequenceShow/hide mRNA sequence
AACATTAACCCACCTCCAAGAACATGGTGGCCGGCAGAGGAATCTCGAGGTACTCCGACATAAGGAGCATAGTCGTCCATGTCATCACTGGATGATGGTTTGTGA
TGTTCACTTCACTCTTGATCATGGCGCCGGAGCGGCGCACATATTCAGCCTATATTCGAGTGACATAAAATCTGTTTTGGGTTACAACCAAACGACTTTGAATTT
GCTAAGCTTTTTCAAAGATTTGGGTGGAAATATCGGCATTTTGTCCGGGCTTATTAACGAGGTTACACTGCCATGGGTGGTTCTGTCCATCGGCGCCTTTCTAAA
TTTCTTTGGTTACTTTATGATTTGGCTCGCCGTTACTCGACGGATCCCCACCCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAGTC
TTTTGCTAATACGGGTTCTATGGTAACATTTGTCAAGAACTTTCTCGAAAATTGCGGTGTCGTTCTTGGTAAGTATTTTAATTATAAGTTTAGTTCC
Protein sequenceShow/hide protein sequence
MMVCDVHFTLDHGAGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIG
ANSQSFANTGSMVTFVKNFLENCGVVLGKYFNYKFSS