; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G001130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G001130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationchr04:1237049..1237666
RNA-Seq ExpressionLsi04G001130
SyntenyLsi04G001130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601193.1 hypothetical protein SDJN03_06426, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4389.05Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEG----SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPY--GGGGGGGGGGGG
        MATT  +GLVLLVLLM D TLAARF RGY    GGGSGGGGGGGEG    SGSGYGSGYGSGYGSGYGD GY RYGDE Y PYGPY  GGGGGGGGGGGG
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEG----SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPY--GGGGGGGGGGGG

Query:  GGGGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGS
        GGGGANGAGYG GFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYG+GGGRGGGGGGGGGGGGGGGGG GMGGGSGYGS
Subjt:  GGGGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGS

Query:  GYGSGYGGGG
        GYGSGYGGGG
Subjt:  GYGSGYGGGG

XP_008447018.1 PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]2.8e-3985.65Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEGS-----GSGYGSGYGSGYGSGY-GDEGYSRYGDEGYEPYGPY-GGGGGGGGGGG
        MATT+AVG V+LVLLM+D  LAARFFRGY    GGGSGGGGGGGEGS     GSGYGSGYGSGYGSGY G+EGYSRYGDEGY PYG Y GGGGGGGGGGG
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEGS-----GSGYGSGYGSGYGSGY-GDEGYSRYGDEGYEPYGPY-GGGGGGGGGGG

Query:  GGGGGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYG
        GGGG A GA YGRGFG G GSGYGSGGGVGRGGGGGGG   GGGGGGGSG+GSGSGYGSGYGSGGGYGSGGGRGGGGG GGGGGGGGGGGGGMGGGSGYG
Subjt:  GGGGGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYG

Query:  SGYGSGYGGGGGEESP
        SGYGSGYGGGG EESP
Subjt:  SGYGSGYGGGGGEESP

XP_022990525.1 putative glycine-rich cell wall structural protein 1 [Cucurbita maxima]2.7e-4289.42Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEG----SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYGGGGGGGGGGGGGG
        MAT  A+GLVLLVLLM D TLAARF RGY    GGGSGGGGGGGEG    SGSGYGSGYGSGYGSGYGD GY RYGDEGY PYG  GGGGGGGGGGGGGG
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEG----SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYGGGGGGGGGGGGGG

Query:  GGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGY
        G ANGAGYG+GFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGG GMGGGSGYGSGY
Subjt:  GGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGY

Query:  GSGYGGGG
        GSGYGGGG
Subjt:  GSGYGGGG

XP_023550088.1 glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]5.2e-4690Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEG----SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPY------GGGGGGGGGGGG
        MATT A+GLVLLVLLM D TLAARF RGYGGGSGGGGGGGEG    SGSGYGSGYGSGYGSGYGD GY RYGDEGY PYGPY      GGGGGGGGGGGG
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEG----SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPY------GGGGGGGGGGGG

Query:  GGGGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGS
        GGGGANGAGYG GFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYG+GGGRGGGGGGGGGGGGGGGGG GMGGGSGYGS
Subjt:  GGGGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGS

Query:  GYGSGYGGGG
        GYGSGYGGGG
Subjt:  GYGSGYGGGG

XP_031741764.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]9.5e-4085.85Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEG----SGSGYGSGYGSGYGSGY-GDEGYSRYGDEG-YEPYGPY-GGGGGGGGGGGGGGG
        MATT+A GLV+LVLLM+D  LAARFFRGYGGGSGGGGGGGEG    SGSGYGSGYGSGYGSGY G+EGYSRYGDEG Y PYGPY GGGGGGGGGGGGGGG
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEG----SGSGYGSGYGSGYGSGY-GDEGYSRYGDEG-YEPYGPY-GGGGGGGGGGGGGGG

Query:  GANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGYG
         A GA YGRGFG+GSGSGYGSGGGVGRGGGGGGG   GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGG       GGGSGYGSGYG
Subjt:  GANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGYG

Query:  SGYGGGGGEESP
        SGYGGGG EESP
Subjt:  SGYGGGGGEESP

TrEMBL top hitse value%identityAlignment
A0A0A0KUV7 Uncharacterized protein1.0e-3984.91Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEG----SGSGYGSGYGSGYGSGY-GDEGYSRYGDEG-YEPYGPY-GGGGGGGGGGGGGGG
        MATT+A GLV+LVLLM+D  LAARFFRGYGGGSGGGGGGGEG    SGSGYGSGYGSGYGSGY G+EGYSRYGDEG Y PYGPY GGGGGGGGGGGGGGG
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEG----SGSGYGSGYGSGYGSGY-GDEGYSRYGDEG-YEPYGPY-GGGGGGGGGGGGGGG

Query:  GANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGYG
         A GA YGRGFG+GSGSGYGSGGGVGRGGGGGGG   GGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGG         GGGSGYGSGYG
Subjt:  GANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGYG

Query:  SGYGGGGGEESP
        SGYGGGG EESP
Subjt:  SGYGGGGGEESP

A0A1S3BGF1 glycine-rich cell wall structural protein 2-like1.3e-3985.65Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEGS-----GSGYGSGYGSGYGSGY-GDEGYSRYGDEGYEPYGPY-GGGGGGGGGGG
        MATT+AVG V+LVLLM+D  LAARFFRGY    GGGSGGGGGGGEGS     GSGYGSGYGSGYGSGY G+EGYSRYGDEGY PYG Y GGGGGGGGGGG
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEGS-----GSGYGSGYGSGYGSGY-GDEGYSRYGDEGYEPYGPY-GGGGGGGGGGG

Query:  GGGGGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYG
        GGGG A GA YGRGFG G GSGYGSGGGVGRGGGGGGG   GGGGGGGSG+GSGSGYGSGYGSGGGYGSGGGRGGGGG GGGGGGGGGGGGGMGGGSGYG
Subjt:  GGGGGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYG

Query:  SGYGSGYGGGGGEESP
        SGYGSGYGGGG EESP
Subjt:  SGYGSGYGGGGGEESP

A0A5E4EXV8 PREDICTED: glycine-rich cell wall structural 25.1e-1570.95Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFR----GYGGGSGGGGGGGEGSGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYGGGGGGGGGGGGGGGGAN
        MA+T+ +G   LVLL+V+ + AAR  +    G G G GGGGGGGEG G G  +G GSGYGSG+G    S YG EG       GGGG GGGGGGGGG GAN
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFR----GYGGGSGGGGGGGEGSGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYGGGGGGGGGGGGGGGGAN

Query:  GAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGG---GMGGGSGYGSGYG
        G G G G+GSGSGSGYGSGGG G GGGGGGG G GGGGGGGSG GSGSGYGSGYGSG GYGSGGG+GGGGGGGGGGGGGGGGGG   G G GSGYGSGYG
Subjt:  GAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGG---GMGGGSGYGSGYG

Query:  SGYGGGGGEE
        SGYGGGGGE+
Subjt:  SGYGGGGGEE

A0A6J1CF67 putative glycine-rich cell wall structural protein 16.7e-3183.24Show/hide
Query:  ATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEG---SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYG-GGGGGGGGGGGGGGGANG
        ++TRA+GLV+LVLLMVD TLAAR  RGYGGG+GGGGGGGEG   SGSGYGSGYGSGYGSG+GDE Y  Y  E Y PYGPYG GGGGGGGGGGGGGGGA G
Subjt:  ATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEG---SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYG-GGGGGGGGGGGGGGGANG

Query:  AGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGG
        AGYGRGF    GSGYGSGGG+GRGGGGGGGGGRGGGGGGGSG GSGSGYGSGYGSGGGYG+G GRGGGGGGGG
Subjt:  AGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGG

A0A6J1JQB8 putative glycine-rich cell wall structural protein 11.3e-4289.42Show/hide
Query:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEG----SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYGGGGGGGGGGGGGG
        MAT  A+GLVLLVLLM D TLAARF RGY    GGGSGGGGGGGEG    SGSGYGSGYGSGYGSGYGD GY RYGDEGY PYG  GGGGGGGGGGGGGG
Subjt:  MATTRAVGLVLLVLLMVDFTLAARFFRGY----GGGSGGGGGGGEG----SGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYGGGGGGGGGGGGGG

Query:  GGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGY
        G ANGAGYG+GFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGG GMGGGSGYGSGY
Subjt:  GGANGAGYGRGFGSGSGSGYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGY

Query:  GSGYGGGG
        GSGYGGGG
Subjt:  GSGYGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTACCAGGGCGGTTGGTTTGGTGCTCTTGGTTTTGTTAATGGTGGACTTCACTCTTGCTGCTAGATTCTTCAGGGGCTATGGAGGTGGTAGTGGTGGCGGTGG
AGGTGGCGGAGAAGGTTCGGGTTCGGGATATGGTTCAGGGTATGGCTCGGGTTATGGTTCGGGATATGGCGATGAAGGCTATTCTAGATATGGAGATGAAGGCTATGAAC
CATATGGGCCATATGGGGGTGGTGGAGGTGGAGGTGGAGGAGGTGGCGGTGGTGGCGGCGGCGCAAATGGAGCCGGGTATGGTCGGGGGTTTGGTTCGGGAAGTGGGTCA
GGGTATGGGTCTGGTGGTGGAGTTGGACGTGGCGGAGGAGGTGGTGGTGGCGGCGGCAGAGGTGGAGGAGGAGGTGGAGGCTCGGGAATTGGGAGTGGATCGGGATATGG
TTCGGGATATGGAAGTGGGGGAGGGTATGGAAGTGGTGGAGGCAGAGGTGGTGGCGGGGGTGGTGGAGGAGGTGGCGGCGGCGGAGGCGGCGGTGGAGGAGGGATGGGCG
GAGGGTCTGGATATGGTTCTGGATATGGGTCAGGATATGGAGGAGGTGGTGGTGAAGAATCACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTACCAGGGCGGTTGGTTTGGTGCTCTTGGTTTTGTTAATGGTGGACTTCACTCTTGCTGCTAGATTCTTCAGGGGCTATGGAGGTGGTAGTGGTGGCGGTGG
AGGTGGCGGAGAAGGTTCGGGTTCGGGATATGGTTCAGGGTATGGCTCGGGTTATGGTTCGGGATATGGCGATGAAGGCTATTCTAGATATGGAGATGAAGGCTATGAAC
CATATGGGCCATATGGGGGTGGTGGAGGTGGAGGTGGAGGAGGTGGCGGTGGTGGCGGCGGCGCAAATGGAGCCGGGTATGGTCGGGGGTTTGGTTCGGGAAGTGGGTCA
GGGTATGGGTCTGGTGGTGGAGTTGGACGTGGCGGAGGAGGTGGTGGTGGCGGCGGCAGAGGTGGAGGAGGAGGTGGAGGCTCGGGAATTGGGAGTGGATCGGGATATGG
TTCGGGATATGGAAGTGGGGGAGGGTATGGAAGTGGTGGAGGCAGAGGTGGTGGCGGGGGTGGTGGAGGAGGTGGCGGCGGCGGAGGCGGCGGTGGAGGAGGGATGGGCG
GAGGGTCTGGATATGGTTCTGGATATGGGTCAGGATATGGAGGAGGTGGTGGTGAAGAATCACCATGA
Protein sequenceShow/hide protein sequence
MATTRAVGLVLLVLLMVDFTLAARFFRGYGGGSGGGGGGGEGSGSGYGSGYGSGYGSGYGDEGYSRYGDEGYEPYGPYGGGGGGGGGGGGGGGGANGAGYGRGFGSGSGS
GYGSGGGVGRGGGGGGGGGRGGGGGGGSGIGSGSGYGSGYGSGGGYGSGGGRGGGGGGGGGGGGGGGGGGGMGGGSGYGSGYGSGYGGGGGEESP