; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G001180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G001180
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionnon-symbiotic hemoglobin 2
Genome locationchr04:1282298..1284843
RNA-Seq ExpressionLsi04G001180
SyntenyLsi04G001180
Gene Ontology termsGO:0044255 - cellular lipid metabolic process (biological process)
GO:0019825 - oxygen binding (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR000971 - Globin
IPR001032 - Leghaemoglobin
IPR009050 - Globin-like superfamily
IPR012292 - Globin/Protoglobin
IPR019824 - Leghaemoglobin, iron-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648838.1 hypothetical protein Csa_008865 [Cucumis sativus]1.3e-4366.89Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        MDFTEKEESLVKES++VLKKD+PFYSLHFFTQILEIAP AK +FSFLRDSEEIPQNNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVKEG GEKWS+EMGNAWT+AY HLASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

XP_004142447.1 non-symbiotic hemoglobin 2 [Cucumis sativus]1.3e-4366.89Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        MDFTEKEESLVKES++VLKKD+PFYSLHFFTQILEIAP AK +FSFLRDSEEIPQNNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVKEG GEKWS+EMGNAWT+AY HLASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

XP_008446801.1 PREDICTED: non-symbiotic hemoglobin 2 [Cucumis melo]3.9e-4366.23Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        MDFTEKEESLVKES++VLKKDLPFYSLHFFTQILEIAP AK +FSFLRDSE+IP NNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVKEG GEKWS+EMGNAWT+AY HLASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

XP_022956839.1 non-symbiotic hemoglobin 2 [Cucurbita moschata]3.3e-4264.9Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        M+FTEKEE LVKESWDVL KDLP YSLHFFTQILEIAP AK +FSFLRDSE+IPQNNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVK+G GE+WS+EMGNAWTRAYD LASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

XP_038891898.1 non-symbiotic hemoglobin 2 [Benincasa hispida]2.7e-4467.55Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        M+FTEKEE LVKESW+VLKKDLP YSL FFTQILEIAP AK++FSFLRDSEEIPQNNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVKEG GEKWSDEMGNAWTRAYDHLASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

TrEMBL top hitse value%identityAlignment
A0A0A0KTH6 GLOBIN domain-containing protein6.4e-4466.89Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        MDFTEKEESLVKES++VLKKD+PFYSLHFFTQILEIAP AK +FSFLRDSEEIPQNNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVKEG GEKWS+EMGNAWT+AY HLASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

A0A1S3BFZ4 non-symbiotic hemoglobin 21.9e-4366.23Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        MDFTEKEESLVKES++VLKKDLPFYSLHFFTQILEIAP AK +FSFLRDSE+IP NNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVKEG GEKWS+EMGNAWT+AY HLASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

A0A5A7SU63 Non-symbiotic hemoglobin 21.9e-4366.23Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        MDFTEKEESLVKES++VLKKDLPFYSLHFFTQILEIAP AK +FSFLRDSE+IP NNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVKEG GEKWS+EMGNAWT+AY HLASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

A0A6J1H076 non-symbiotic hemoglobin 21.6e-4264.9Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        M+FTEKEE LVKESWDVL KDLP YSLHFFTQILEIAP AK +FSFLRDSE+IPQNNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVK+G GE+WS+EMGNAWTRAYD LASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

A0A6J1J9P1 non-symbiotic hemoglobin 21.3e-4163.58Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        M+FTEKEE LVKESWDVLKKDLP YSLHFFTQILEIAP AKD+FSFL+ SEE+ QNNPKLKAHALKVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRTVK+G GE+W +EMGNAWTRAYD LASAIK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

SwissProt top hitse value%identityAlignment
O24521 Non-symbiotic hemoglobin 23.9e-3855.7Show/hide
Query:  FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM--------------------------------
        FTEK+E+LVKESW++LK+D+P YSLHFF+QILEIAP AK +FSFLRDS+E+P NNPKLKAHA+KVFKM                                
Subjt:  FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM--------------------------------

Query:  -------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
               VVKEALLRT+KEG GEK+++E+  AW++AYDHLA AIK+EMK
Subjt:  -------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

P08054 Hemoglobin-13.6e-2844.37Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        M  TEK+E+L+K+SW+VLK+++P +SL  F  I+E AP++K +FSFL+DS EIP+NNPKLKAHA  +FK                               
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
                 V+K ALL T+KE   E WSDEMG AWT AY+ L + IK+EMK
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

Q93Y92 Non-symbiotic hemoglobin 21.8e-3555.26Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        M FTEK+E LVKESW+VLK+D+P  SL FF+ ILEIAP AK++FSFLR+SEEIPQNNPKLKAHA+KVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAG-EKWSDEMGNAWTRAYDHLASAIKSEMK
                 VVKEALLRT++E  G EKW++EM NAW  AYD LA AIK+EMK
Subjt:  ---------VVKEALLRTVKEGAG-EKWSDEMGNAWTRAYDHLASAIKSEMK

Q941P9 Non-symbiotic hemoglobin 21.3e-3350.67Show/hide
Query:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------
        M FT+K+E+LV++SW+ +K+D+P  SL FF+ ILEIAP AK++FSFL+DS+E+P+NNPKL+AHA+KVFKM                              
Subjt:  MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM------------------------------

Query:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEM
                 VVKEALLRTVKE  G KW DEM  AW+ AYD LASAIK+EM
Subjt:  ---------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEM

Q941Q2 Non-symbiotic hemoglobin 23.0e-3855.03Show/hide
Query:  FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM--------------------------------
        FTEK+E+LVKESW++LK+D+P YSLHFF+QILEIAP AKD+FSFLRD++E+P NNPKLKAHA+KVFKM                                
Subjt:  FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM--------------------------------

Query:  -------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
               VVKEAL+RT+KEG GEK+++E+  AW++AYDHLA AIK+EMK
Subjt:  -------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK

Arabidopsis top hitse value%identityAlignment
AT2G16060.1 hemoglobin 15.2e-2241.22Show/hide
Query:  FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM--------------------------------
        FTE++E+LV +SW V+KK+     L  F +I EIAP  K +FSFLRDS    + NPKLK HA+ VF M                                
Subjt:  FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM--------------------------------

Query:  -------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEM
               V K ALL T+KE   E WS EM  AW +AYDHL +AIK+EM
Subjt:  -------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEM

AT3G10520.1 haemoglobin 22.8e-3955.7Show/hide
Query:  FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM--------------------------------
        FTEK+E+LVKESW++LK+D+P YSLHFF+QILEIAP AK +FSFLRDS+E+P NNPKLKAHA+KVFKM                                
Subjt:  FTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKM--------------------------------

Query:  -------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK
               VVKEALLRT+KEG GEK+++E+  AW++AYDHLA AIK+EMK
Subjt:  -------VVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSEMK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCACAGAGAAGGAAGAAAGTTTAGTGAAAGAATCATGGGATGTTTTGAAGAAGGATTTGCCTTTTTACAGCCTTCATTTCTTTACTCAGATATTGGAGATAGC
TCCAGATGCGAAGGACATATTTTCTTTCTTAAGGGATTCAGAAGAGATTCCTCAGAACAATCCTAAGCTCAAGGCTCATGCCCTCAAGGTTTTCAAAATGGTGGTGAAAG
AGGCATTGCTTCGAACAGTGAAAGAAGGTGCGGGAGAGAAATGGAGCGACGAAATGGGCAATGCTTGGACACGAGCCTACGATCATTTGGCTTCAGCAATCAAATCTGAA
ATGAAATGA
mRNA sequenceShow/hide mRNA sequence
GTCCCAAAACACCTTATCCTTGAAACTGGTAGAGAGAGAAAGCCAGGAGAGAGAGAGAGAGAGATGGATTTCACAGAGAAGGAAGAAAGTTTAGTGAAAGAATCATGGGA
TGTTTTGAAGAAGGATTTGCCTTTTTACAGCCTTCATTTCTTTACTCAGATATTGGAGATAGCTCCAGATGCGAAGGACATATTTTCTTTCTTAAGGGATTCAGAAGAGA
TTCCTCAGAACAATCCTAAGCTCAAGGCTCATGCCCTCAAGGTTTTCAAAATGGTGGTGAAAGAGGCATTGCTTCGAACAGTGAAAGAAGGTGCGGGAGAGAAATGGAGC
GACGAAATGGGCAATGCTTGGACACGAGCCTACGATCATTTGGCTTCAGCAATCAAATCTGAAATGAAATGAAATGTCATTTCATTCAAATTTCCTACTACTAGCTACTG
CCTTTTTAATTTGCTTCATTTTTTGTGGGAAGAAAAAGAAAAAGAAAATAAATAAAAATATATATTTTGGAAGTAAAAAAGTGTGATGATATTTGTAGTGTAATAATTTG
GATTTGGCGATATTGGCAATGGGGCTCAAACTGTCAAAACCTTCCGTCTGTTTAATTATAGTAAATGGTGTAATAAATATATCTATTTACTTCTTC
Protein sequenceShow/hide protein sequence
MDFTEKEESLVKESWDVLKKDLPFYSLHFFTQILEIAPDAKDIFSFLRDSEEIPQNNPKLKAHALKVFKMVVKEALLRTVKEGAGEKWSDEMGNAWTRAYDHLASAIKSE
MK