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Lsi04G001190 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G001190
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationchr04:1303887..1304264
RNA-Seq ExpressionLsi04G001190
SyntenyLsi04G001190
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446800.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like [Cucumis melo]1.6e-5384.96Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTS--MAGDHSGVVIQKDRIDD------EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVE
        MST+LDLRRTLLEIVRRP IKLQIPLPST+  M GD  GV+IQKDRID       EELCCRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVE
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTS--MAGDHSGVVIQKDRIDD------EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVE

Query:  IVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK
        IV+R+EIEPYLN+SFDHEDRVRKSAKRSFCECK
Subjt:  IVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK

XP_011655851.1 cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus]3.5e-5383.58Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMA----GDHSGVVIQKDRIDD-----EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFV
        MST+LDLRRTLLEIVRRP IKLQIP P+TS +    GDH GV+IQKDR+D+     EEL CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFV
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMA----GDHSGVVIQKDRIDD-----EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFV

Query:  EIVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK
        EIV+R+EIEPYLNSSFDHEDRVRKSAKRSFCECK
Subjt:  EIVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK

XP_022957068.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]2.5e-5181.54Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRIDD-----EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVN
        MSTDLDLRRTLLE+VRRPAIKLQIP P +SMA DH GV+IQK+RID+     EELCCRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFVEIV+
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRIDD-----EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVN

Query:  REEIEPYLNSSFDHEDRVRKSAKRSFCECK
        REEIEPY  SSFDHE+RV+KSAK SFCECK
Subjt:  REEIEPYLNSSFDHEDRVRKSAKRSFCECK

XP_022992922.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]6.6e-5282.31Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRID-----DEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVN
        MSTDLDLRRTLLE+VRRPAIKLQIP P +SMA DH GV+IQK+RID     DEELCCRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFVEIV+
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRID-----DEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVN

Query:  REEIEPYLNSSFDHEDRVRKSAKRSFCECK
        REEIEPY  SSFDHE+RV+KSAK SFCECK
Subjt:  REEIEPYLNSSFDHEDRVRKSAKRSFCECK

XP_038893025.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]2.8e-5893.7Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRIDD--EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVNREE
        MSTDLDLRRTLLEIVRRP IKLQIPLPSTSMAGDH GV+IQKDRI D  EELCCRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVEIVNREE
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRIDD--EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVNREE

Query:  IEPYLNSSFDHEDRVRKSAKRSFCECK
        IEPYL SSFDHEDRVRKSAKRSFCECK
Subjt:  IEPYLNSSFDHEDRVRKSAKRSFCECK

TrEMBL top hitse value%identityAlignment
A0A0A0KRI0 Uncharacterized protein1.7e-5383.58Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMA----GDHSGVVIQKDRIDD-----EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFV
        MST+LDLRRTLLEIVRRP IKLQIP P+TS +    GDH GV+IQKDR+D+     EEL CRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFV
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMA----GDHSGVVIQKDRIDD-----EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFV

Query:  EIVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK
        EIV+R+EIEPYLNSSFDHEDRVRKSAKRSFCECK
Subjt:  EIVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK

A0A1S3BFF9 cyclin-dependent protein kinase inhibitor SMR1-like7.6e-5484.96Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTS--MAGDHSGVVIQKDRIDD------EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVE
        MST+LDLRRTLLEIVRRP IKLQIPLPST+  M GD  GV+IQKDRID       EELCCRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVE
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTS--MAGDHSGVVIQKDRIDD------EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVE

Query:  IVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK
        IV+R+EIEPYLN+SFDHEDRVRKSAKRSFCECK
Subjt:  IVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK

A0A5D3CD68 Cyclin-dependent protein kinase inhibitor SMR1-like7.6e-5484.96Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTS--MAGDHSGVVIQKDRIDD------EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVE
        MST+LDLRRTLLEIVRRP IKLQIPLPST+  M GD  GV+IQKDRID       EELCCRTPTSAENKIPAV QCPPAPRKRKRPPSCRRRLMELEFVE
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTS--MAGDHSGVVIQKDRIDD------EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVE

Query:  IVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK
        IV+R+EIEPYLN+SFDHEDRVRKSAKRSFCECK
Subjt:  IVNREEIEPYLNSSFDHEDRVRKSAKRSFCECK

A0A6J1GZ63 cyclin-dependent protein kinase inhibitor SMR1-like1.2e-5181.54Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRIDD-----EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVN
        MSTDLDLRRTLLE+VRRPAIKLQIP P +SMA DH GV+IQK+RID+     EELCCRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFVEIV+
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRIDD-----EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVN

Query:  REEIEPYLNSSFDHEDRVRKSAKRSFCECK
        REEIEPY  SSFDHE+RV+KSAK SFCECK
Subjt:  REEIEPYLNSSFDHEDRVRKSAKRSFCECK

A0A6J1JRA3 cyclin-dependent protein kinase inhibitor SMR1-like3.2e-5282.31Show/hide
Query:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRID-----DEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVN
        MSTDLDLRRTLLE+VRRPAIKLQIP P +SMA DH GV+IQK+RID     DEELCCRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFVEIV+
Subjt:  MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRID-----DEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVN

Query:  REEIEPYLNSSFDHEDRVRKSAKRSFCECK
        REEIEPY  SSFDHE+RV+KSAK SFCECK
Subjt:  REEIEPYLNSSFDHEDRVRKSAKRSFCECK

SwissProt top hitse value%identityAlignment
Q29Q81 Cyclin-dependent protein kinase inhibitor SMR68.2e-0544.68Show/hide
Query:  IQKDRIDDEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLM
        +++D  ++EE C  TPT+ E KIP + +CPPAPRKR+    CR  ++
Subjt:  IQKDRIDDEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLM

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR11.4e-0738.38Show/hide
Query:  QKDRIDDEE--LCCRTPTSAENKIPAVEQCPPAPRKRKRPP-------------SCRRRLMELEFVEIVNREEIEPYLNSSFDHEDRVRKSAKRSFCEC
        +KD  DD+E  L C TPTS E+KIPAV   PP P ++ RPP             SC+R+L+      I+NREEI+ + +S ++      K  +RS+  C
Subjt:  QKDRIDDEE--LCCRTPTSAENKIPAVEQCPPAPRKRKRPP-------------SCRRRLMELEFVEIVNREEIEPYLNSSFDHEDRVRKSAKRSFCEC

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein8.5e-0540.54Show/hide
Query:  EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRL---MELEFVEI--VNREEIEPYLNSSFDHEDRVRKS
        E LC  TPTS+++KIP VE CPP PRKR R  S  ++     +L F E   V  +E+E       +H  + R+S
Subjt:  EELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRL---MELEFVEI--VNREEIEPYLNSSFDHEDRVRKS

AT2G37610.1 unknown protein5.5e-0443.14Show/hide
Query:  QKDRIDDEELCCRTPTSAENKIPAVEQCPPAPRKRK------RPPSCRRRL
        +++ +++E    +TPT  EN+IP V +CPPAP KR       R   CRRRL
Subjt:  QKDRIDDEELCCRTPTSAENKIPAVEQCPPAPRKRK------RPPSCRRRL

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS9.6e-0938.38Show/hide
Query:  QKDRIDDEE--LCCRTPTSAENKIPAVEQCPPAPRKRKRPP-------------SCRRRLMELEFVEIVNREEIEPYLNSSFDHEDRVRKSAKRSFCEC
        +KD  DD+E  L C TPTS E+KIPAV   PP P ++ RPP             SC+R+L+      I+NREEI+ + +S ++      K  +RS+  C
Subjt:  QKDRIDDEE--LCCRTPTSAENKIPAVEQCPPAPRKRKRPP-------------SCRRRLMELEFVEIVNREEIEPYLNSSFDHEDRVRKSAKRSFCEC

AT5G02420.1 unknown protein1.1e-0439.77Show/hide
Query:  KDRIDDEELCCRTPTSAENKIPAVEQ--CPPAPRKRK--RPPSCRRRLMELEFVEIVNR------EEIEPYLNSSFDHEDRVRKSAKR
        +D   +EE  C+TPTS+++KIP V+   CPPAPRK K  R    +R+L     V +VNR       EIE +     D + R++KS K+
Subjt:  KDRIDDEELCCRTPTSAENKIPAVEQ--CPPAPRKRK--RPPSCRRRLMELEFVEIVNR------EEIEPYLNSSFDHEDRVRKSAKR

AT5G40460.1 unknown protein5.9e-0644.68Show/hide
Query:  IQKDRIDDEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLM
        +++D  ++EE C  TPT+ E KIP + +CPPAPRKR+    CR  ++
Subjt:  IQKDRIDDEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACTGCCGTCGACGTCAATGGCCGGCGATCACAGCGG
TGTGGTAATTCAGAAAGACAGAATCGACGATGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGAACAATGTCCGCCGGCGCCACGTA
AGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAATTCGAGTTTCGATCACGAA
GACAGAGTAAGAAAATCAGCTAAAAGAAGTTTCTGCGAGTGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACAGACCTCGATCTCCGACGGACATTGCTGGAAATCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACTGCCGTCGACGTCAATGGCCGGCGATCACAGCGG
TGTGGTAATTCAGAAAGACAGAATCGACGATGAAGAATTATGTTGCCGTACACCGACGTCGGCAGAGAACAAGATTCCGGCGGTGGAACAATGTCCGCCGGCGCCACGTA
AGCGGAAGAGACCGCCGAGTTGTAGAAGAAGATTAATGGAGCTTGAATTTGTGGAGATCGTGAATAGAGAAGAAATCGAACCGTATTTAAATTCGAGTTTCGATCACGAA
GACAGAGTAAGAAAATCAGCTAAAAGAAGTTTCTGCGAGTGTAAATGA
Protein sequenceShow/hide protein sequence
MSTDLDLRRTLLEIVRRPAIKLQIPLPSTSMAGDHSGVVIQKDRIDDEELCCRTPTSAENKIPAVEQCPPAPRKRKRPPSCRRRLMELEFVEIVNREEIEPYLNSSFDHE
DRVRKSAKRSFCECK