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Lsi04G001240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G001240
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPeriod circadian protein
Genome locationchr04:1398467..1400380
RNA-Seq ExpressionLsi04G001240
SyntenyLsi04G001240
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_218512096.1 hypothetical protein [Salmonella enterica]9.3e-0453.75Show/hide
Query:  EYKASGKRKSAG-PGPKIPFCSLILPSPGREIGTTTGTGTVTETGTGTAT-TGTGTGTGTGTGTGPETCSACTLLSSSRH
        +YK S  R S   P P   F  + LP  G   GT TGTGT T TGTGT T TGTGTGTGTGTGTG  T S  T ++ + H
Subjt:  EYKASGKRKSAG-PGPKIPFCSLILPSPGREIGTTTGTGTVTETGTGTAT-TGTGTGTGTGTGTGPETCSACTLLSSSRH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
Q03353 Period circadian protein (Fragments)3.3e-0464.71Show/hide
Query:  GREIGTTTGTGTVTETGTGTAT-TGTGTGTGTGTGTGPETCSACTLLSSSR
        G   GT TGTGT T TGTGT T TGTGTGTGTGTG G  +C+     SSSR
Subjt:  GREIGTTTGTGTVTETGTGTAT-TGTGTGTGTGTGTGPETCSACTLLSSSR
Q04537 Period circadian protein (Fragment)5.6e-0454.29Show/hide
Query:  KASGKRKSAG---PGPKIPFCSLILPSPGREIGTTTGTGTVTETGTGTAT-TGTGTGTGTGTGTGPETCS
        + SG   S+G    G  +   S+   S G   GT TGTGT T TGTGT T TGTGTGTGTGTGTG  T S
Subjt:  KASGKRKSAG---PGPKIPFCSLILPSPGREIGTTTGTGTVTETGTGTAT-TGTGTGTGTGTGTGPETCS
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAGTATTTTACTTGACTTGATGAACTCAATAGAGTATAAAGCCTCCGGAAAACGTAAATCTGCAGGGCCAGGACCCAAAATCCCCTTCTGTTCACTAATCTTGCC
TAGCCCAGGGAGGGAGATTGGGACCACAACTGGAACTGGAACGGTAACTGAAACTGGAACCGGAACCGCAACAACTGGAACCGGAACCGGAACAGGAACAGGAACCGGAA
CCGGACCAGAAACATGTTCTGCCTGTACACTTCTTTCTTCATCTCGCCACACACTCCCCTGCCACTCTATCTATAAAACCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAGTATTTTACTTGACTTGATGAACTCAATAGAGTATAAAGCCTCCGGAAAACGTAAATCTGCAGGGCCAGGACCCAAAATCCCCTTCTGTTCACTAATCTTGCC
TAGCCCAGGGAGGGAGATTGGGACCACAACTGGAACTGGAACGGTAACTGAAACTGGAACCGGAACCGCAACAACTGGAACCGGAACCGGAACAGGAACAGGAACCGGAA
CCGGACCAGAAACATGTTCTGCCTGTACACTTCTTTCTTCATCTCGCCACACACTCCCCTGCCACTCTATCTATAAAACCAAATAA
Protein sequenceShow/hide protein sequence
MLSILLDLMNSIEYKASGKRKSAGPGPKIPFCSLILPSPGREIGTTTGTGTVTETGTGTATTGTGTGTGTGTGTGPETCSACTLLSSSRHTLPCHSIYKTK