; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G001370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G001370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRAB6-interacting golgin
Genome locationchr04:1577231..1579072
RNA-Seq ExpressionLsi04G001370
SyntenyLsi04G001370
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034665.1 uncharacterized protein E6C27_scaffold65G006840 [Cucumis melo var. makuwa]3.2e-6791.93Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNG+RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQ+IFNEK NEKAQLLATLME    SEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

XP_004150485.1 uncharacterized protein LOC101217540 [Cucumis sativus]1.0e-6892.55Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN +RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQ+IFNEK NEKAQLLATLMELLGQSEKWRMKKLEELNKNIES N
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

XP_008446775.1 PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]4.8e-7194.41Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNG+RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQ+IFNEK NEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

XP_022150510.1 uncharacterized protein LOC111018644 [Momordica charantia]3.8e-6083.85Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTS +GG  NGER   EGS  Q E+EMVSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKE  EIFNEK NEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

XP_038892385.1 uncharacterized protein LOC120081508 [Benincasa hispida]1.8e-6286.96Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNG GGN           +NE+EM+SKLT+STLQAREEEIE+KKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKE KEVQ+IFNEK NEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

TrEMBL top hitse value%identityAlignment
A0A0A0KTG1 RAB6-interacting golgin4.9e-6992.55Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN +RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQ+IFNEK NEKAQLLATLMELLGQSEKWRMKKLEELNKNIES N
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

A0A1S3BFW5 RAB6-interacting golgin2.3e-7194.41Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNG+RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQ+IFNEK NEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

A0A5D3CFS0 RAB6-interacting golgin1.6e-6791.93Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNG+RVL EGS  +NE+E VSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQ+IFNEK NEKAQLLATLME    SEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

A0A6J1D8N9 RAB6-interacting golgin1.8e-6083.85Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTS +GG  NGER   EGS  Q E+EMVSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKE  EIFNEK NEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

A0A6J1HV92 RAB6-interacting golgin2.4e-6083.33Show/hide
Query:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE
        MTSK+G  GNGER++SEGS G++E+ EM  +LTVSTLQAREEEIER+KMEVKEKVE QL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT K+E
Subjt:  MTSKNGGGGNGERVLSEGSIGQNEE-EMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        LKSLGQICQKKEKEYKEV EIFNEK NEKAQLL TLMELL QSE+WRM KLEELNK+I  TN
Subjt:  LKSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.2 Family of unknown function (DUF662)8.5e-3452.9Show/hide
Query:  NGERVLSEGSIG-----QNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLG
        + E VL  GS+        E+E +++  +S  +A+E+EIE+++MEV+E+++ QL R E+E KRL+ I EELE M DPM KEV  VRK+ID+V +ELK LG
Subjt:  NGERVLSEGSIG-----QNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLG

Query:  QICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES
           QKKE+EYKE  + FNEK  EK QL+  LMEL+G+SEK RM KLEEL+K+IE+
Subjt:  QICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES

AT3G09980.1 Family of unknown function (DUF662)4.8e-3760Show/hide
Query:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEY
        +S  S    E+E +S+  +S  +A+EEEIE+KKME++E+V+ QL R EEE KRLA I EELE + DPM KEV  VRK+ID+V +ELK LG   QKKE+EY
Subjt:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEY

Query:  KEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES
        KE  E FNEK  EK QL+  LMEL+G+SEK RMKKLEEL+KNI+S
Subjt:  KEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES

AT3G52900.1 Family of unknown function (DUF662)8.3e-3756.88Show/hide
Query:  MTSKNGGGG---NGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVK
        M+SKN  G    +G     +  +  NEEE + K+ V+  QAREEEIERKKM VKEKV+ +L  AEE  + L Q  EELE+MGDPM KEVG VRK+ID   
Subjt:  MTSKNGGGG---NGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVK

Query:  RELKSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNI
        R++KSL Q CQKKEKEYK+  E FNEK  EKA L++ LMELL +SE+ R+KKLEE+NK +
Subjt:  RELKSLGQICQKKEKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNI

AT3G52920.2 Family of unknown function (DUF662)5.0e-3455.17Show/hide
Query:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEY
        LS  S    E+E +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+V +ELK LG   QKKE+EY
Subjt:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEY

Query:  KEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES
        KE  + FNEK  EK QL+  LMEL+G+SEK R+KKL+EL+++I++
Subjt:  KEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES

AT5G03660.1 Family of unknown function (DUF662)7.2e-3354.79Show/hide
Query:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEY
        +S  S  + E++ +S   +S  +A+EEEIE+KKME++E+V+ QL R E+E+KRLA I EELE   DPM KEV  VRK+ID++ +ELK LG   QKKE EY
Subjt:  LSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEY

Query:  KEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIEST
        K+  E FNEK  EK +L+  L EL G+SEK+R KKLEEL+KNI+ T
Subjt:  KEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIEST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTAAGAATGGAGGTGGAGGAAATGGCGAGAGAGTCCTATCGGAAGGAAGTATTGGTCAAAACGAAGAAGAGATGGTGTCTAAACTGACCGTATCTACATTGCA
AGCTAGGGAAGAGGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTCGAATTTCAGTTAACCCGTGCGGAGGAAGAAGCCAAACGCTTGGCACAAATTTGGGAAG
AGCTGGAAGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTAATGTGCGAAAAAGAATTGACACAGTCAAGAGAGAACTGAAATCTCTGGGACAGATTTGCCAAAAGAAG
GAAAAAGAATATAAGGAAGTCCAGGAAATATTCAACGAAAAAGGCAACGAGAAAGCTCAGCTACTTGCTACACTAATGGAGCTGCTGGGGCAGAGTGAGAAATGGAGGAT
GAAAAAGCTCGAGGAGTTGAATAAGAATATAGAATCAACGAAC
mRNA sequenceShow/hide mRNA sequence
GAGACGAAGTTTATAAGAAAACAAAGAAAATTATGACAAGTAAGAATGGAGGTGGAGGAAATGGCGAGAGAGTCCTATCGGAAGGAAGTATTGGTCAAAACGAAGAAGAG
ATGGTGTCTAAACTGACCGTATCTACATTGCAAGCTAGGGAAGAGGAGATTGAGAGGAAGAAGATGGAAGTAAAAGAGAAGGTCGAATTTCAGTTAACCCGTGCGGAGGA
AGAAGCCAAACGCTTGGCACAAATTTGGGAAGAGCTGGAAGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTAATGTGCGAAAAAGAATTGACACAGTCAAGAGAGAAC
TGAAATCTCTGGGACAGATTTGCCAAAAGAAGGAAAAAGAATATAAGGAAGTCCAGGAAATATTCAACGAAAAAGGCAACGAGAAAGCTCAGCTACTTGCTACACTAATG
GAGCTGCTGGGGCAGAGTGAGAAATGGAGGATGAAAAAGCTCGAGGAGTTGAATAAGAATATAGAATCAACGAAC
Protein sequenceShow/hide protein sequence
MTSKNGGGGNGERVLSEGSIGQNEEEMVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK
EKEYKEVQEIFNEKGNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN